Wall clock time and date at job start Sun Mar 7 2021 11:57:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86303 * 109.47244 * 2 1 4 4 C 1.50698 * 109.46979 * 240.00063 * 2 1 3 5 5 C 1.38251 * 119.97312 * 120.00243 * 4 2 1 6 6 C 1.38283 * 120.11374 * 180.02562 * 5 4 2 7 7 C 1.38128 * 120.05387 * 359.95262 * 6 5 4 8 8 C 1.38751 * 119.94409 * 0.02580 * 7 6 5 9 9 O 1.35899 * 120.05621 * 180.02562 * 8 7 6 10 10 C 1.42902 * 116.99732 * 359.97438 * 9 8 7 11 11 C 1.53004 * 109.47178 * 180.02562 * 10 9 8 12 12 C 1.50700 * 109.47208 * 179.97438 * 11 10 9 13 13 O 1.21283 * 119.99803 * 359.97438 * 12 11 10 14 14 N 1.34777 * 119.99675 * 180.27843 * 12 11 10 15 15 C 1.46497 * 119.99525 * 179.72583 * 14 12 11 16 16 C 1.50702 * 112.85273 * 48.80095 * 15 14 12 17 17 C 1.38436 * 120.01641 * 189.66292 * 16 15 14 18 18 F 1.35106 * 120.02158 * 0.02733 * 17 16 15 19 19 C 1.38479 * 119.95122 * 180.02562 * 17 16 15 20 20 C 1.38173 * 119.97372 * 0.02562 * 19 17 16 21 21 C 1.38270 * 120.02794 * 359.97438 * 20 19 17 22 22 C 1.38224 * 120.04805 * 359.72737 * 21 20 19 23 23 C 1.53776 * 113.61563 * 277.49430 * 15 14 12 24 24 C 1.53780 * 87.08288 * 270.88560 * 23 15 14 25 25 H 1.09001 * 113.69514 * 220.00857 * 24 23 15 26 26 O 1.42894 * 113.61636 * 89.11316 * 24 23 15 27 27 C 1.53781 * 87.08006 * 334.56577 * 24 23 15 28 28 C 1.38162 * 119.97389 * 300.25372 * 4 2 1 29 29 H 0.96700 * 114.00202 * 59.99517 * 1 2 3 30 30 H 1.08998 * 109.47337 * 120.00113 * 2 1 3 31 31 H 1.48508 * 109.99772 * 60.00085 * 3 2 1 32 32 H 1.48494 * 110.00080 * 181.32019 * 3 2 1 33 33 H 1.08006 * 119.93954 * 359.97438 * 5 4 2 34 34 H 1.07997 * 119.97212 * 179.97438 * 6 5 4 35 35 H 1.07996 * 120.02276 * 180.02562 * 7 6 5 36 36 H 1.09000 * 109.47600 * 60.00051 * 10 9 8 37 37 H 1.08998 * 109.47515 * 300.00028 * 10 9 8 38 38 H 1.09009 * 109.46730 * 59.99802 * 11 10 9 39 39 H 1.08998 * 109.46846 * 300.00347 * 11 10 9 40 40 H 0.97000 * 119.99894 * 359.71837 * 14 12 11 41 41 H 1.08000 * 120.01309 * 179.97438 * 19 17 16 42 42 H 1.08003 * 119.98644 * 180.02562 * 20 19 17 43 43 H 1.07999 * 119.97780 * 179.97438 * 21 20 19 44 44 H 1.08002 * 119.98844 * 180.27175 * 22 21 20 45 45 H 1.09000 * 113.61774 * 25.43315 * 23 15 14 46 46 H 1.09000 * 113.61639 * 156.34055 * 23 15 14 47 47 H 0.96701 * 114.00282 * 82.50751 * 26 24 23 48 48 H 1.08998 * 113.61475 * 270.87863 * 27 24 23 49 49 H 1.09004 * 113.61672 * 139.97876 * 27 24 23 50 50 H 1.07997 * 120.02805 * 359.97438 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7261 -0.0380 -2.1401 6 6 3.1882 -0.6869 -3.2705 7 6 2.8573 -2.0094 -3.4928 8 6 2.0601 -2.6866 -2.5812 9 8 1.7335 -3.9879 -2.7975 10 6 2.2453 -4.5964 -3.9848 11 6 1.7753 -6.0507 -4.0559 12 6 2.3145 -6.6923 -5.3084 13 8 3.0063 -6.0495 -6.0694 14 7 2.0229 -7.9786 -5.5857 15 6 2.5422 -8.6005 -6.8063 16 6 4.0192 -8.3706 -6.9975 17 6 4.6249 -8.7168 -8.1933 18 9 3.8920 -9.2605 -9.1896 19 6 5.9823 -8.5054 -8.3674 20 6 6.7308 -7.9498 -7.3475 21 6 6.1249 -7.6044 -6.1536 22 6 4.7689 -7.8092 -5.9809 23 6 1.7024 -8.2961 -8.0580 24 6 0.8748 -9.5447 -7.7102 25 1 0.5959 -10.1413 -8.5788 26 8 -0.2293 -9.2765 -6.8436 27 6 2.1203 -10.0695 -6.9767 28 6 1.5928 -2.0316 -1.4512 29 1 -0.3933 0.4418 -0.7650 30 1 1.7924 -0.5138 0.8899 31 1 1.5615 2.4679 1.2086 32 1 3.5346 1.7703 -0.0321 33 1 2.9859 0.9961 -1.9680 34 1 3.8086 -0.1593 -3.9797 35 1 3.2187 -2.5158 -4.3756 36 1 3.3348 -4.5668 -3.9677 37 1 1.8809 -4.0541 -4.8572 38 1 0.6857 -6.0799 -4.0732 39 1 2.1394 -6.5933 -3.1835 40 1 1.4694 -8.4925 -4.9772 41 1 6.4559 -8.7755 -9.2996 42 1 7.7895 -7.7845 -7.4831 43 1 6.7108 -7.1705 -5.3568 44 1 4.2957 -7.5350 -5.0496 45 1 1.1386 -7.3658 -7.9900 46 1 2.2595 -8.3875 -8.9904 47 1 -1.0157 -8.9462 -7.2992 48 1 2.7916 -10.6456 -7.6134 49 1 1.8940 -10.5707 -6.0355 50 1 0.9689 -2.5554 -0.7422 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17639084_4549614.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 11:57:47 Heat of formation + Delta-G solvation = -91.539618 kcal Electronic energy + Delta-G solvation = -36008.980208 eV Core-core repulsion = 31077.557781 eV Total energy + Delta-G solvation = -4931.422427 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 388.156 amu Computer time = 1.66 seconds Orbital eigenvalues (eV) -50.13624 -42.16823 -41.30261 -39.89183 -39.41352 -39.06410 -37.27386 -36.27371 -34.19062 -33.12180 -32.46761 -31.98584 -31.34891 -30.79472 -27.13263 -27.03783 -26.31990 -25.08330 -23.70986 -23.66840 -22.89472 -22.10160 -21.43331 -20.66038 -19.40234 -18.86025 -18.29713 -18.06934 -17.72040 -17.60283 -17.48452 -17.17989 -17.01185 -16.92831 -16.77367 -16.59431 -16.25933 -16.00773 -15.64081 -15.41668 -15.20776 -14.94465 -14.82028 -14.67413 -14.46670 -14.41377 -14.20794 -13.94203 -13.84268 -13.64400 -13.45973 -13.21758 -13.04600 -12.90372 -12.82722 -12.50878 -12.40795 -12.34595 -12.00345 -11.93863 -11.83209 -11.64419 -11.63798 -11.10952 -10.82982 -10.51183 -10.22643 -9.93915 -9.82231 -9.60307 -9.29076 -4.98323 0.11926 0.18215 0.23503 0.37344 1.29659 1.46709 1.61532 1.65536 1.96394 2.38181 2.55635 2.65231 3.02171 3.21743 3.34050 3.43947 3.49431 3.51141 3.61315 3.65385 3.73883 3.76703 3.85167 3.86468 3.96997 4.05233 4.08105 4.21725 4.24978 4.27924 4.33174 4.37345 4.40318 4.49348 4.59619 4.60059 4.63465 4.68702 4.72863 4.82070 4.84740 4.87330 4.90152 4.96220 5.01154 5.07945 5.24224 5.30055 5.36298 5.42257 5.42671 5.53250 5.68672 5.88559 6.30935 6.42005 6.75382 6.79507 7.12092 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.555 6.555 2 C -0.078 4.078 3 Si 0.786 3.214 4 C -0.084 4.084 5 C -0.157 4.157 6 C -0.075 4.075 7 C -0.210 4.210 8 C 0.118 3.882 9 O -0.325 6.325 10 C 0.078 3.922 11 C -0.133 4.133 12 C 0.518 3.482 13 O -0.559 6.559 14 N -0.687 5.687 15 C 0.194 3.806 16 C -0.114 4.114 17 C 0.085 3.915 18 F -0.137 7.137 19 C -0.162 4.162 20 C -0.094 4.094 21 C -0.139 4.139 22 C -0.069 4.069 23 C -0.186 4.186 24 C 0.093 3.907 25 H 0.088 0.912 26 O -0.559 6.559 27 C -0.123 4.123 28 C -0.142 4.142 29 H 0.396 0.604 30 H 0.107 0.893 31 H -0.299 1.299 32 H -0.284 1.284 33 H 0.148 0.852 34 H 0.153 0.847 35 H 0.136 0.864 36 H 0.067 0.933 37 H 0.065 0.935 38 H 0.122 0.878 39 H 0.124 0.876 40 H 0.420 0.580 41 H 0.150 0.850 42 H 0.155 0.845 43 H 0.142 0.858 44 H 0.123 0.877 45 H 0.064 0.936 46 H 0.108 0.892 47 H 0.399 0.601 48 H 0.112 0.888 49 H 0.095 0.905 50 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.410 -1.021 -2.230 2.487 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.363 6.363 2 C -0.188 4.188 3 Si 0.691 3.309 4 C -0.084 4.084 5 C -0.175 4.175 6 C -0.093 4.093 7 C -0.229 4.229 8 C 0.073 3.927 9 O -0.239 6.239 10 C 0.003 3.997 11 C -0.173 4.173 12 C 0.306 3.694 13 O -0.438 6.438 14 N -0.339 5.339 15 C 0.107 3.893 16 C -0.116 4.116 17 C 0.066 3.934 18 F -0.116 7.116 19 C -0.181 4.181 20 C -0.112 4.112 21 C -0.157 4.157 22 C -0.087 4.087 23 C -0.224 4.224 24 C 0.033 3.967 25 H 0.106 0.894 26 O -0.367 6.367 27 C -0.160 4.160 28 C -0.161 4.161 29 H 0.246 0.754 30 H 0.124 0.876 31 H -0.227 1.227 32 H -0.211 1.211 33 H 0.166 0.834 34 H 0.171 0.829 35 H 0.154 0.846 36 H 0.086 0.914 37 H 0.083 0.917 38 H 0.140 0.860 39 H 0.142 0.858 40 H 0.258 0.742 41 H 0.168 0.832 42 H 0.173 0.827 43 H 0.160 0.840 44 H 0.140 0.860 45 H 0.083 0.917 46 H 0.126 0.874 47 H 0.249 0.751 48 H 0.130 0.870 49 H 0.113 0.887 50 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges 0.879 -0.668 -1.274 1.686 hybrid contribution -0.525 -0.728 -0.346 0.962 sum 0.354 -1.395 -1.621 2.168 Atomic orbital electron populations 1.86467 1.17150 1.82232 1.50468 1.25306 0.85382 1.11300 0.96785 0.93526 0.77820 0.74840 0.84666 1.20243 0.97619 0.93610 0.96942 1.21177 1.00401 1.00711 0.95188 1.21249 0.97539 0.93437 0.97044 1.21536 1.03166 0.97103 1.01100 1.19133 0.95219 0.83446 0.94943 1.85956 1.71494 1.22817 1.43682 1.22397 0.98951 0.92876 0.85496 1.21433 1.04814 0.94187 0.96837 1.20518 0.79690 0.81842 0.87360 1.90803 1.38878 1.63073 1.51027 1.45453 1.52954 1.11846 1.23694 1.19861 0.87956 0.95053 0.86469 1.19780 0.95657 1.02402 0.93776 1.17527 0.90212 1.00397 0.85283 1.91359 1.76709 1.83543 1.59976 1.21380 0.91912 1.02754 1.02045 1.21332 1.01294 0.96379 0.92149 1.21480 0.94726 1.00659 0.98821 1.20956 0.93911 0.95530 0.98338 1.24411 0.99325 0.99959 0.98744 1.22563 0.86564 0.94608 0.92954 0.89416 1.86339 1.24670 1.88042 1.37640 1.23434 0.96112 0.93442 1.03045 1.20315 1.03757 0.94719 0.97327 0.75439 0.87591 1.22689 1.21051 0.83444 0.82942 0.84597 0.91443 0.91689 0.85992 0.85778 0.74164 0.83195 0.82738 0.84004 0.85957 0.91742 0.87402 0.75086 0.86987 0.88664 0.85570 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.92 12.76 -148.98 -1.90 -2.82 16 2 C -0.08 -0.07 2.82 71.24 0.20 0.13 16 3 Si 0.79 -1.44 29.79 68.60 2.04 0.60 16 4 C -0.08 -0.19 5.39 -19.88 -0.11 -0.30 16 5 C -0.16 0.02 8.67 22.28 0.19 0.21 16 6 C -0.07 -0.02 10.04 22.25 0.22 0.20 16 7 C -0.21 -0.65 9.04 22.37 0.20 -0.45 16 8 C 0.12 0.65 6.69 22.51 0.15 0.81 16 9 O -0.33 -1.62 10.14 -92.41 -0.94 -2.56 16 10 C 0.08 0.12 4.03 71.98 0.29 0.41 16 11 C -0.13 0.38 6.07 29.85 0.18 0.56 16 12 C 0.52 0.76 5.75 87.66 0.50 1.26 16 13 O -0.56 -4.83 13.16 -3.04 -0.04 -4.87 16 14 N -0.69 0.72 4.42 -423.93 -1.87 -1.15 16 15 C 0.19 0.31 1.07 3.38 0.00 0.32 16 16 C -0.11 -0.56 4.58 -19.82 -0.09 -0.65 16 17 C 0.09 0.44 6.71 22.37 0.15 0.59 16 18 F -0.14 -0.64 12.93 44.97 0.58 -0.06 16 19 C -0.16 -0.45 10.03 22.31 0.22 -0.23 16 20 C -0.09 -0.11 10.04 22.26 0.22 0.12 16 21 C -0.14 -0.35 10.04 22.27 0.22 -0.13 16 22 C -0.07 -0.32 7.38 22.26 0.16 -0.16 16 23 C -0.19 -0.36 6.92 31.12 0.22 -0.14 16 24 C 0.09 -0.22 5.28 31.12 0.16 -0.05 16 25 H 0.09 -0.40 8.14 -2.39 -0.02 -0.42 16 26 O -0.56 1.91 12.91 -148.98 -1.92 -0.01 16 27 C -0.12 0.19 6.87 31.12 0.21 0.40 16 28 C -0.14 -0.77 9.55 22.37 0.21 -0.55 16 29 H 0.40 -2.57 8.70 -74.06 -0.64 -3.21 16 30 H 0.11 0.24 7.96 -2.39 -0.02 0.22 16 31 H -0.30 -1.65 7.11 99.48 0.71 -0.94 16 32 H -0.28 -0.71 7.11 99.48 0.71 0.00 16 33 H 0.15 -0.70 4.87 -2.91 -0.01 -0.72 16 34 H 0.15 -0.72 8.06 -2.91 -0.02 -0.74 16 35 H 0.14 0.22 6.30 -2.91 -0.02 0.20 16 36 H 0.07 0.15 7.62 -2.39 -0.02 0.13 16 37 H 0.06 0.19 7.62 -2.39 -0.02 0.17 16 38 H 0.12 -0.64 8.14 -2.38 -0.02 -0.66 16 39 H 0.12 -0.78 8.14 -2.39 -0.02 -0.80 16 40 H 0.42 -2.07 8.42 -92.71 -0.78 -2.85 16 41 H 0.15 -0.15 8.06 -2.91 -0.02 -0.17 16 42 H 0.15 -0.63 8.06 -2.91 -0.02 -0.66 16 43 H 0.14 -0.19 8.06 -2.91 -0.02 -0.21 16 44 H 0.12 0.44 5.53 -2.91 -0.02 0.42 16 45 H 0.06 0.29 8.14 -2.39 -0.02 0.28 16 46 H 0.11 0.38 5.22 -2.39 -0.01 0.37 16 47 H 0.40 -3.90 9.12 -74.06 -0.68 -4.57 16 48 H 0.11 -0.17 6.93 -2.39 -0.02 -0.18 16 49 H 0.09 -0.29 8.12 -2.38 -0.02 -0.31 16 50 H 0.13 0.76 8.06 -2.91 -0.02 0.74 16 Total: 0.00 -20.91 406.56 -1.54 -22.45 By element: Atomic # 1 Polarization: -12.88 SS G_CDS: -1.03 Total: -13.91 kcal Atomic # 6 Polarization: -1.21 SS G_CDS: 3.54 Total: 2.33 kcal Atomic # 7 Polarization: 0.72 SS G_CDS: -1.87 Total: -1.15 kcal Atomic # 8 Polarization: -5.45 SS G_CDS: -4.80 Total: -10.25 kcal Atomic # 9 Polarization: -0.64 SS G_CDS: 0.58 Total: -0.06 kcal Atomic # 14 Polarization: -1.44 SS G_CDS: 2.04 Total: 0.60 kcal Total: -20.91 -1.54 -22.45 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17639084_4549614.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -69.091 kcal (2) G-P(sol) polarization free energy of solvation -20.908 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -90.000 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.540 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.448 kcal (6) G-S(sol) free energy of system = (1) + (5) -91.540 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.66 seconds