Wall clock time and date at job start Sun Mar 7 2021 13:38:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.35450 * 125.56598 * 2 1 4 4 C 1.50695 * 126.06600 * 359.97438 * 3 2 1 5 5 O 1.42902 * 109.47164 * 124.99669 * 4 3 2 6 6 Si 1.86306 * 109.47323 * 244.99517 * 4 3 2 7 7 C 1.39837 * 107.86472 * 179.97438 * 3 2 1 8 8 C 1.50700 * 126.45637 * 180.02562 * 7 3 2 9 9 C 1.37870 * 107.08717 * 359.97438 * 7 3 2 10 10 C 1.46679 * 126.23508 * 180.02562 * 9 7 3 11 11 O 1.21693 * 119.99545 * 0.02562 * 10 9 7 12 12 N 1.34766 * 120.00169 * 180.02562 * 10 9 7 13 13 C 1.46499 * 120.00193 * 179.97438 * 12 10 9 14 14 H 1.08994 * 112.90926 * 336.25159 * 13 12 10 15 15 C 1.53959 * 113.53942 * 107.50375 * 13 12 10 16 16 C 1.53782 * 87.01991 * 89.18884 * 15 13 12 17 17 H 1.08997 * 113.61679 * 270.77626 * 16 15 13 18 18 C 1.52998 * 113.61441 * 139.95263 * 16 15 13 19 19 C 1.52998 * 109.47267 * 317.42468 * 18 16 15 20 20 C 1.52997 * 109.47012 * 77.42370 * 18 16 15 21 21 C 1.52999 * 109.47096 * 197.42486 * 18 16 15 22 22 C 1.53778 * 87.17327 * 25.36322 * 16 15 13 23 23 N 1.35538 * 125.56338 * 180.26816 * 2 1 3 24 24 H 1.08993 * 109.47207 * 84.73971 * 1 2 3 25 25 H 1.09004 * 109.47214 * 204.74647 * 1 2 3 26 26 H 1.09002 * 109.47073 * 324.74126 * 1 2 3 27 27 H 1.08995 * 109.47324 * 4.99592 * 4 3 2 28 28 H 0.96696 * 114.00048 * 179.97438 * 5 4 3 29 29 H 1.48503 * 109.99625 * 304.81124 * 6 4 3 30 30 H 1.48495 * 109.99922 * 66.12940 * 6 4 3 31 31 H 1.09004 * 109.46949 * 269.98011 * 8 7 3 32 32 H 1.08996 * 109.47587 * 29.97605 * 8 7 3 33 33 H 1.08994 * 109.47515 * 149.98230 * 8 7 3 34 34 H 0.97004 * 120.00273 * 359.97438 * 12 10 9 35 35 H 1.09003 * 113.66445 * 334.66700 * 15 13 12 36 36 H 1.08991 * 113.61549 * 203.70981 * 15 13 12 37 37 H 1.09004 * 109.47022 * 66.31404 * 19 18 16 38 38 H 1.08997 * 109.47362 * 186.31177 * 19 18 16 39 39 H 1.08999 * 109.47255 * 306.31506 * 19 18 16 40 40 H 1.09004 * 109.47150 * 60.00295 * 20 18 16 41 41 H 1.09007 * 109.47293 * 180.02562 * 20 18 16 42 42 H 1.09003 * 109.47430 * 300.00106 * 20 18 16 43 43 H 1.08998 * 109.47189 * 60.00056 * 21 18 16 44 44 H 1.09007 * 109.46884 * 180.02562 * 21 18 16 45 45 H 1.08995 * 109.47191 * 300.00022 * 21 18 16 46 46 H 1.09000 * 113.61877 * 89.15312 * 22 16 15 47 47 H 1.09003 * 113.61894 * 220.06382 * 22 16 15 48 48 H 0.97001 * 125.68126 * 0.07575 * 23 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2948 1.1018 0.0000 4 6 1.8199 2.5320 -0.0005 5 8 2.4028 3.2279 1.1032 6 14 2.3294 3.3550 -1.5924 7 6 3.6270 0.6766 0.0006 8 6 4.8486 1.5591 0.0014 9 6 3.6122 -0.7020 0.0015 10 6 4.7859 -1.5816 0.0029 11 8 5.9048 -1.1031 0.0038 12 7 4.6253 -2.9197 0.0032 13 6 5.7976 -3.7983 0.0041 14 1 6.6884 -3.3175 -0.3999 15 6 6.0343 -4.5063 1.3505 16 6 5.1265 -5.6317 0.8269 17 1 4.0705 -5.4807 1.0506 18 6 5.6164 -7.0344 1.1921 19 6 7.1314 -7.1133 0.9933 20 6 5.2780 -7.3280 2.6550 21 6 4.9298 -8.0646 0.2931 22 6 5.5250 -5.1898 -0.5911 23 7 2.2953 -1.1026 -0.0052 24 1 -0.3633 0.0942 -1.0233 25 1 -0.3634 -0.9333 0.4302 26 1 -0.3633 0.8392 0.5933 27 1 0.7339 2.5543 0.0885 28 1 2.1408 4.1566 1.1651 29 1 3.7969 3.2291 -1.7821 30 1 1.6143 2.7345 -2.7364 31 1 5.1438 1.7717 -1.0262 32 1 4.6217 2.4933 0.5148 33 1 5.6639 1.0505 0.5157 34 1 3.7334 -3.3011 0.0029 35 1 5.6187 -3.9720 2.2049 36 1 7.0679 -4.8156 1.5054 37 1 7.6266 -6.4606 1.7123 38 1 7.4648 -8.1399 1.1448 39 1 7.3821 -6.7954 -0.0187 40 1 4.1987 -7.2718 2.7966 41 1 5.6275 -8.3271 2.9154 42 1 5.7672 -6.5940 3.2955 43 1 5.1709 -7.8554 -0.7491 44 1 5.2786 -9.0640 0.5536 45 1 3.8506 -8.0084 0.4347 46 1 6.4192 -5.6862 -0.9681 47 1 4.6989 -5.2064 -1.3020 48 1 1.9834 -2.0210 -0.0105 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664192_12297754.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 13:38:32 Heat of formation + Delta-G solvation = -16.425882 kcal Electronic energy + Delta-G solvation = -26223.366502 eV Core-core repulsion = 22666.649164 eV Total energy + Delta-G solvation = -3556.717338 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 307.193 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -42.67184 -41.46300 -39.60756 -37.58470 -36.58760 -34.14450 -33.62954 -32.74692 -29.24170 -28.58691 -28.33663 -27.67502 -26.57992 -26.36047 -25.47459 -22.70659 -21.28113 -20.75654 -19.92206 -19.32746 -19.10820 -18.20873 -17.03602 -16.88432 -16.57900 -16.13981 -15.93721 -15.70015 -15.30874 -15.05846 -15.01068 -14.72905 -14.34726 -14.28909 -14.05331 -13.93381 -13.84061 -13.68219 -13.51973 -13.28577 -13.21367 -13.03206 -12.84380 -12.79823 -12.53634 -12.52799 -12.32394 -12.13676 -11.96542 -11.60894 -11.44227 -11.21787 -10.95887 -10.84807 -10.47353 -10.11084 -9.46164 -8.99648 -4.87071 0.42318 1.24692 1.67035 1.83013 1.93058 2.04399 2.22981 2.39471 3.42299 3.44584 3.53502 3.63831 3.72216 3.75710 3.84157 3.95360 4.00474 4.15006 4.16825 4.17565 4.31332 4.39863 4.43220 4.50674 4.59874 4.63260 4.65977 4.67654 4.69779 4.76440 4.79480 4.84363 4.89024 4.93077 5.00441 5.02120 5.03014 5.09022 5.10737 5.15116 5.28638 5.35761 5.37889 5.38679 5.45633 5.59794 5.73402 5.94508 6.26610 6.47036 6.80570 7.19182 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.096 4.096 2 C 0.079 3.921 3 C -0.171 4.171 4 C -0.024 4.024 5 O -0.544 6.544 6 Si 0.669 3.331 7 C -0.040 4.040 8 C -0.099 4.099 9 C -0.069 4.069 10 C 0.594 3.406 11 O -0.520 6.520 12 N -0.716 5.716 13 C 0.121 3.879 14 H 0.105 0.895 15 C -0.150 4.150 16 C -0.099 4.099 17 H 0.085 0.915 18 C -0.059 4.059 19 C -0.149 4.149 20 C -0.141 4.141 21 C -0.141 4.141 22 C -0.144 4.144 23 N -0.535 5.535 24 H 0.080 0.920 25 H 0.071 0.929 26 H 0.089 0.911 27 H 0.066 0.934 28 H 0.379 0.621 29 H -0.245 1.245 30 H -0.266 1.266 31 H 0.064 0.936 32 H 0.078 0.922 33 H 0.081 0.919 34 H 0.393 0.607 35 H 0.069 0.931 36 H 0.099 0.901 37 H 0.059 0.941 38 H 0.055 0.945 39 H 0.059 0.941 40 H 0.052 0.948 41 H 0.055 0.945 42 H 0.055 0.945 43 H 0.055 0.945 44 H 0.055 0.945 45 H 0.053 0.947 46 H 0.101 0.899 47 H 0.070 0.930 48 H 0.416 0.584 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.547 -0.974 -0.247 5.637 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C -0.040 4.040 3 C -0.177 4.177 4 C -0.135 4.135 5 O -0.350 6.350 6 Si 0.569 3.431 7 C -0.048 4.048 8 C -0.155 4.155 9 C -0.180 4.180 10 C 0.383 3.617 11 O -0.395 6.395 12 N -0.366 5.366 13 C 0.015 3.985 14 H 0.123 0.877 15 C -0.189 4.189 16 C -0.117 4.117 17 H 0.103 0.897 18 C -0.059 4.059 19 C -0.206 4.206 20 C -0.199 4.199 21 C -0.198 4.198 22 C -0.182 4.182 23 N -0.133 5.133 24 H 0.099 0.901 25 H 0.090 0.910 26 H 0.108 0.892 27 H 0.084 0.916 28 H 0.226 0.774 29 H -0.169 1.169 30 H -0.191 1.191 31 H 0.083 0.917 32 H 0.097 0.903 33 H 0.100 0.900 34 H 0.226 0.774 35 H 0.088 0.912 36 H 0.117 0.883 37 H 0.078 0.922 38 H 0.074 0.926 39 H 0.078 0.922 40 H 0.072 0.928 41 H 0.074 0.926 42 H 0.074 0.926 43 H 0.074 0.926 44 H 0.074 0.926 45 H 0.072 0.928 46 H 0.119 0.881 47 H 0.089 0.911 48 H 0.254 0.746 Dipole moment (debyes) X Y Z Total from point charges -4.053 -1.498 -0.942 4.423 hybrid contribution -0.960 -1.436 0.235 1.743 sum -5.013 -2.935 -0.707 5.852 Atomic orbital electron populations 1.20520 0.87114 1.04106 1.03592 1.20266 0.93651 0.85501 1.04580 1.18479 0.92545 0.92791 1.13934 1.23882 0.98751 0.91134 0.99762 1.86515 1.72637 1.27140 1.48713 0.96412 0.82272 0.88920 0.75455 1.19838 0.95031 0.90903 0.99026 1.20537 0.94185 0.98637 1.02173 1.20084 0.82782 0.94044 1.21050 1.16961 0.87508 0.81166 0.76097 1.90838 1.24107 1.74847 1.49742 1.45540 1.09177 1.05536 1.76373 1.21882 0.89295 0.89778 0.97506 0.87704 1.23627 1.01338 0.96545 0.97369 1.22633 0.99237 0.93959 0.95858 0.89707 1.20427 0.95685 0.94151 0.95658 1.22043 0.94680 1.01885 1.01954 1.21849 1.01289 1.01570 0.95152 1.21849 1.00197 0.98403 0.99393 1.23468 1.02847 0.94968 0.96884 1.41782 1.05390 1.08247 1.57907 0.90094 0.91014 0.89200 0.91604 0.77367 1.16872 1.19089 0.91712 0.90342 0.90005 0.77388 0.91225 0.88309 0.92171 0.92561 0.92226 0.92839 0.92591 0.92569 0.92559 0.92598 0.92838 0.88091 0.91123 0.74648 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.23 9.97 36.00 0.36 0.59 16 2 C 0.08 0.08 7.13 -81.95 -0.58 -0.51 16 3 C -0.17 -0.53 4.49 -105.02 -0.47 -1.00 16 4 C -0.02 -0.02 2.78 36.00 0.10 0.08 16 5 O -0.54 -0.44 11.57 -35.23 -0.41 -0.85 16 6 Si 0.67 0.22 31.76 -169.99 -5.40 -5.18 16 7 C -0.04 -0.20 5.87 -104.16 -0.61 -0.81 16 8 C -0.10 -0.52 8.20 36.01 0.30 -0.22 16 9 C -0.07 -0.25 7.06 -81.98 -0.58 -0.83 16 10 C 0.59 2.45 7.79 -12.86 -0.10 2.35 16 11 O -0.52 -3.93 14.40 5.20 0.07 -3.85 16 12 N -0.72 -0.42 5.26 -54.23 -0.29 -0.70 16 13 C 0.12 0.06 4.33 -67.02 -0.29 -0.24 16 14 H 0.10 0.24 7.46 -51.93 -0.39 -0.14 16 15 C -0.15 0.03 7.04 -25.82 -0.18 -0.15 16 16 C -0.10 0.15 2.90 -89.81 -0.26 -0.11 16 17 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 18 C -0.06 0.08 0.68 -154.51 -0.10 -0.03 16 19 C -0.15 0.17 7.53 37.16 0.28 0.45 16 20 C -0.14 0.12 8.42 37.16 0.31 0.43 16 21 C -0.14 0.18 8.33 37.16 0.31 0.49 16 22 C -0.14 0.21 6.46 -25.92 -0.17 0.04 16 23 N -0.54 -0.18 5.99 -5.70 -0.03 -0.21 16 24 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 25 H 0.07 -0.27 8.14 -51.93 -0.42 -0.69 16 26 H 0.09 -0.25 7.26 -51.93 -0.38 -0.63 16 27 H 0.07 -0.10 6.65 -51.93 -0.35 -0.44 16 28 H 0.38 -1.63 8.74 45.56 0.40 -1.23 16 29 H -0.24 -0.90 5.87 56.52 0.33 -0.56 16 30 H -0.27 -0.85 7.11 56.52 0.40 -0.45 16 31 H 0.06 0.36 7.36 -51.93 -0.38 -0.02 16 32 H 0.08 0.36 6.67 -51.93 -0.35 0.01 16 33 H 0.08 0.52 6.48 -51.93 -0.34 0.19 16 34 H 0.39 -0.83 7.83 -40.82 -0.32 -1.15 16 35 H 0.07 0.07 8.14 -51.93 -0.42 -0.36 16 36 H 0.10 -0.04 5.72 -51.93 -0.30 -0.34 16 37 H 0.06 -0.06 6.43 -51.93 -0.33 -0.39 16 38 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 39 H 0.06 -0.08 6.00 -51.93 -0.31 -0.39 16 40 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 41 H 0.05 -0.04 8.14 -51.92 -0.42 -0.46 16 42 H 0.06 -0.03 8.05 -51.93 -0.42 -0.44 16 43 H 0.06 -0.07 7.61 -51.93 -0.39 -0.47 16 44 H 0.05 -0.06 8.14 -51.92 -0.42 -0.48 16 45 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 46 H 0.10 -0.17 6.02 -51.93 -0.31 -0.48 16 47 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 48 H 0.42 -1.31 8.19 -40.82 -0.33 -1.65 16 LS Contribution 368.83 15.07 5.56 5.56 Total: 0.00 -8.33 368.83 -10.18 -18.51 By element: Atomic # 1 Polarization: -5.82 SS G_CDS: -7.99 Total: -13.81 kcal Atomic # 6 Polarization: 2.24 SS G_CDS: -1.69 Total: 0.54 kcal Atomic # 7 Polarization: -0.60 SS G_CDS: -0.32 Total: -0.92 kcal Atomic # 8 Polarization: -4.37 SS G_CDS: -0.33 Total: -4.70 kcal Atomic # 14 Polarization: 0.22 SS G_CDS: -5.40 Total: -5.18 kcal Total LS contribution 5.56 Total: 5.56 kcal Total: -8.33 -10.18 -18.51 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664192_12297754.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 2.081 kcal (2) G-P(sol) polarization free energy of solvation -8.326 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -6.246 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.180 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.507 kcal (6) G-S(sol) free energy of system = (1) + (5) -16.426 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds