Wall clock time and date at job start Sun Mar 7 2021 13:38:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.35450 * 125.56598 * 2 1 4 4 C 1.50695 * 126.06600 * 359.97438 * 3 2 1 5 5 O 1.42902 * 109.47164 * 124.99669 * 4 3 2 6 6 Si 1.86306 * 109.47323 * 244.99517 * 4 3 2 7 7 C 1.39837 * 107.86472 * 179.97438 * 3 2 1 8 8 C 1.50700 * 126.45637 * 180.02562 * 7 3 2 9 9 C 1.37870 * 107.08717 * 359.97438 * 7 3 2 10 10 C 1.46679 * 126.23508 * 180.02562 * 9 7 3 11 11 O 1.21693 * 119.99545 * 0.02562 * 10 9 7 12 12 N 1.34766 * 120.00169 * 180.02562 * 10 9 7 13 13 C 1.46499 * 120.00193 * 179.97438 * 12 10 9 14 14 H 1.08994 * 112.90926 * 336.25159 * 13 12 10 15 15 C 1.53959 * 113.53942 * 107.50375 * 13 12 10 16 16 C 1.53782 * 87.01991 * 89.18884 * 15 13 12 17 17 H 1.08997 * 113.61679 * 270.77626 * 16 15 13 18 18 C 1.52998 * 113.61441 * 139.95263 * 16 15 13 19 19 C 1.52998 * 109.47267 * 317.42468 * 18 16 15 20 20 C 1.52997 * 109.47012 * 77.42370 * 18 16 15 21 21 C 1.52999 * 109.47096 * 197.42486 * 18 16 15 22 22 C 1.53778 * 87.17327 * 25.36322 * 16 15 13 23 23 N 1.35538 * 125.56338 * 180.26816 * 2 1 3 24 24 H 1.08993 * 109.47207 * 84.73971 * 1 2 3 25 25 H 1.09004 * 109.47214 * 204.74647 * 1 2 3 26 26 H 1.09002 * 109.47073 * 324.74126 * 1 2 3 27 27 H 1.08995 * 109.47324 * 4.99592 * 4 3 2 28 28 H 0.96696 * 114.00048 * 179.97438 * 5 4 3 29 29 H 1.48503 * 109.99625 * 304.81124 * 6 4 3 30 30 H 1.48495 * 109.99922 * 66.12940 * 6 4 3 31 31 H 1.09004 * 109.46949 * 269.98011 * 8 7 3 32 32 H 1.08996 * 109.47587 * 29.97605 * 8 7 3 33 33 H 1.08994 * 109.47515 * 149.98230 * 8 7 3 34 34 H 0.97004 * 120.00273 * 359.97438 * 12 10 9 35 35 H 1.09003 * 113.66445 * 334.66700 * 15 13 12 36 36 H 1.08991 * 113.61549 * 203.70981 * 15 13 12 37 37 H 1.09004 * 109.47022 * 66.31404 * 19 18 16 38 38 H 1.08997 * 109.47362 * 186.31177 * 19 18 16 39 39 H 1.08999 * 109.47255 * 306.31506 * 19 18 16 40 40 H 1.09004 * 109.47150 * 60.00295 * 20 18 16 41 41 H 1.09007 * 109.47293 * 180.02562 * 20 18 16 42 42 H 1.09003 * 109.47430 * 300.00106 * 20 18 16 43 43 H 1.08998 * 109.47189 * 60.00056 * 21 18 16 44 44 H 1.09007 * 109.46884 * 180.02562 * 21 18 16 45 45 H 1.08995 * 109.47191 * 300.00022 * 21 18 16 46 46 H 1.09000 * 113.61877 * 89.15312 * 22 16 15 47 47 H 1.09003 * 113.61894 * 220.06382 * 22 16 15 48 48 H 0.97001 * 125.68126 * 0.07575 * 23 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2948 1.1018 0.0000 4 6 1.8199 2.5320 -0.0005 5 8 2.4028 3.2279 1.1032 6 14 2.3294 3.3550 -1.5924 7 6 3.6270 0.6766 0.0006 8 6 4.8486 1.5591 0.0014 9 6 3.6122 -0.7020 0.0015 10 6 4.7859 -1.5816 0.0029 11 8 5.9048 -1.1031 0.0038 12 7 4.6253 -2.9197 0.0032 13 6 5.7976 -3.7983 0.0041 14 1 6.6884 -3.3175 -0.3999 15 6 6.0343 -4.5063 1.3505 16 6 5.1265 -5.6317 0.8269 17 1 4.0705 -5.4807 1.0506 18 6 5.6164 -7.0344 1.1921 19 6 7.1314 -7.1133 0.9933 20 6 5.2780 -7.3280 2.6550 21 6 4.9298 -8.0646 0.2931 22 6 5.5250 -5.1898 -0.5911 23 7 2.2953 -1.1026 -0.0052 24 1 -0.3633 0.0942 -1.0233 25 1 -0.3634 -0.9333 0.4302 26 1 -0.3633 0.8392 0.5933 27 1 0.7339 2.5543 0.0885 28 1 2.1408 4.1566 1.1651 29 1 3.7969 3.2291 -1.7821 30 1 1.6143 2.7345 -2.7364 31 1 5.1438 1.7717 -1.0262 32 1 4.6217 2.4933 0.5148 33 1 5.6639 1.0505 0.5157 34 1 3.7334 -3.3011 0.0029 35 1 5.6187 -3.9720 2.2049 36 1 7.0679 -4.8156 1.5054 37 1 7.6266 -6.4606 1.7123 38 1 7.4648 -8.1399 1.1448 39 1 7.3821 -6.7954 -0.0187 40 1 4.1987 -7.2718 2.7966 41 1 5.6275 -8.3271 2.9154 42 1 5.7672 -6.5940 3.2955 43 1 5.1709 -7.8554 -0.7491 44 1 5.2786 -9.0640 0.5536 45 1 3.8506 -8.0084 0.4347 46 1 6.4192 -5.6862 -0.9681 47 1 4.6989 -5.2064 -1.3020 48 1 1.9834 -2.0210 -0.0105 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17664192_12297754.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 13:38:31 Heat of formation + Delta-G solvation = -14.888641 kcal Electronic energy + Delta-G solvation = -26223.299842 eV Core-core repulsion = 22666.649164 eV Total energy + Delta-G solvation = -3556.650678 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 307.193 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -42.81213 -41.50258 -39.82661 -37.60060 -36.65195 -34.29379 -33.79624 -32.77800 -29.34051 -28.50313 -28.26705 -27.83446 -26.67352 -26.32538 -25.48753 -22.85275 -21.34237 -20.90947 -20.05491 -19.44667 -19.08543 -18.22194 -17.14554 -16.96169 -16.69034 -16.22489 -16.03361 -15.72906 -15.29942 -15.12736 -15.05236 -14.82093 -14.46641 -14.36640 -14.26037 -13.92685 -13.87589 -13.61895 -13.55053 -13.32137 -13.26533 -13.21036 -12.83297 -12.75169 -12.64501 -12.48110 -12.44657 -12.08758 -11.91727 -11.82142 -11.39719 -11.18240 -11.15567 -10.94383 -10.51347 -10.27626 -9.62082 -9.12877 -4.93745 0.20745 1.14887 1.58567 1.72204 1.79989 1.97798 2.08841 2.18260 3.43866 3.48317 3.56900 3.64989 3.70278 3.78268 3.79704 3.99660 4.02440 4.14495 4.20355 4.24035 4.33130 4.40699 4.48163 4.50908 4.63320 4.65132 4.68155 4.70862 4.73309 4.74985 4.77924 4.85789 4.90487 4.93447 4.97229 4.99143 5.06744 5.09311 5.09999 5.15647 5.17345 5.19400 5.35485 5.39574 5.46779 5.54353 5.61511 5.71734 6.24391 6.40466 6.96892 7.07862 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.096 4.096 2 C 0.092 3.908 3 C -0.202 4.202 4 C -0.024 4.024 5 O -0.563 6.563 6 Si 0.749 3.251 7 C -0.074 4.074 8 C -0.089 4.089 9 C -0.084 4.084 10 C 0.590 3.410 11 O -0.566 6.566 12 N -0.698 5.698 13 C 0.111 3.889 14 H 0.081 0.919 15 C -0.149 4.149 16 C -0.088 4.088 17 H 0.094 0.906 18 C -0.057 4.057 19 C -0.150 4.150 20 C -0.141 4.141 21 C -0.140 4.140 22 C -0.131 4.131 23 N -0.519 5.519 24 H 0.093 0.907 25 H 0.092 0.908 26 H 0.100 0.900 27 H 0.097 0.903 28 H 0.400 0.600 29 H -0.300 1.300 30 H -0.302 1.302 31 H 0.050 0.950 32 H 0.080 0.920 33 H 0.062 0.938 34 H 0.408 0.592 35 H 0.057 0.943 36 H 0.099 0.901 37 H 0.055 0.945 38 H 0.054 0.946 39 H 0.062 0.938 40 H 0.056 0.944 41 H 0.054 0.946 42 H 0.050 0.950 43 H 0.058 0.942 44 H 0.052 0.948 45 H 0.056 0.944 46 H 0.105 0.895 47 H 0.081 0.919 48 H 0.433 0.567 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.196 -1.900 -0.036 8.413 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C -0.028 4.028 3 C -0.207 4.207 4 C -0.134 4.134 5 O -0.372 6.372 6 Si 0.656 3.344 7 C -0.083 4.083 8 C -0.146 4.146 9 C -0.195 4.195 10 C 0.379 3.621 11 O -0.445 6.445 12 N -0.348 5.348 13 C 0.006 3.994 14 H 0.099 0.901 15 C -0.187 4.187 16 C -0.106 4.106 17 H 0.112 0.888 18 C -0.057 4.057 19 C -0.207 4.207 20 C -0.199 4.199 21 C -0.197 4.197 22 C -0.169 4.169 23 N -0.118 5.118 24 H 0.112 0.888 25 H 0.110 0.890 26 H 0.118 0.882 27 H 0.115 0.885 28 H 0.251 0.749 29 H -0.228 1.228 30 H -0.230 1.230 31 H 0.069 0.931 32 H 0.099 0.901 33 H 0.081 0.919 34 H 0.245 0.755 35 H 0.076 0.924 36 H 0.117 0.883 37 H 0.074 0.926 38 H 0.073 0.927 39 H 0.081 0.919 40 H 0.075 0.925 41 H 0.073 0.927 42 H 0.069 0.931 43 H 0.077 0.923 44 H 0.071 0.929 45 H 0.075 0.925 46 H 0.123 0.877 47 H 0.100 0.900 48 H 0.274 0.726 Dipole moment (debyes) X Y Z Total from point charges -6.757 -2.454 -0.712 7.223 hybrid contribution -0.094 -1.170 0.144 1.183 sum -6.850 -3.624 -0.567 7.771 Atomic orbital electron populations 1.20701 0.84111 1.05733 1.04772 1.20853 0.95259 0.84781 1.01905 1.18904 0.92019 0.94788 1.15013 1.23909 1.00364 0.89829 0.99348 1.86471 1.73217 1.29042 1.48519 0.95732 0.77593 0.87395 0.73707 1.20030 0.95723 0.91743 1.00798 1.20367 0.94385 0.98832 1.01006 1.19955 0.83897 0.93722 1.21953 1.17150 0.87107 0.82154 0.75697 1.90809 1.25765 1.75796 1.52110 1.45376 1.10154 1.04439 1.74879 1.21956 0.88589 0.90378 0.98493 0.90080 1.23604 1.01753 0.96929 0.96411 1.22575 0.99339 0.93286 0.95380 0.88753 1.20404 0.95545 0.94222 0.95525 1.22055 0.94871 1.01722 1.02055 1.21849 1.01419 1.01318 0.95286 1.21835 1.00358 0.98102 0.99415 1.23414 1.03411 0.92958 0.97119 1.41739 1.04072 1.09303 1.56696 0.88843 0.88964 0.88156 0.88536 0.74884 1.22777 1.23034 0.93117 0.90079 0.91907 0.75545 0.92380 0.88312 0.92560 0.92691 0.91900 0.92519 0.92732 0.93128 0.92276 0.92865 0.92461 0.87689 0.90027 0.72582 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.75 9.97 71.23 0.71 1.46 16 2 C 0.09 0.06 7.13 41.34 0.29 0.35 16 3 C -0.20 -1.26 4.49 -20.12 -0.09 -1.35 16 4 C -0.02 -0.02 2.78 71.23 0.20 0.18 16 5 O -0.56 -0.70 11.57 -148.98 -1.72 -2.42 16 6 Si 0.75 1.10 31.76 68.60 2.18 3.28 16 7 C -0.07 -0.87 5.87 -19.56 -0.11 -0.99 16 8 C -0.09 -1.24 8.20 71.24 0.58 -0.66 16 9 C -0.08 -0.71 7.06 40.35 0.28 -0.42 16 10 C 0.59 6.01 7.79 86.45 0.67 6.69 16 11 O -0.57 -10.49 14.40 -4.33 -0.06 -10.55 16 12 N -0.70 -1.29 5.26 -443.72 -2.33 -3.62 16 13 C 0.11 0.21 4.33 45.58 0.20 0.41 16 14 H 0.08 0.58 7.46 -2.39 -0.02 0.56 16 15 C -0.15 -0.04 7.04 31.18 0.22 0.18 16 16 C -0.09 0.32 2.90 -10.27 -0.03 0.29 16 17 H 0.09 -0.48 8.14 -2.39 -0.02 -0.50 16 18 C -0.06 0.18 0.68 -52.18 -0.04 0.14 16 19 C -0.15 0.35 7.53 71.98 0.54 0.89 16 20 C -0.14 0.29 8.42 71.98 0.61 0.90 16 21 C -0.14 0.51 8.33 71.98 0.60 1.11 16 22 C -0.13 0.45 6.46 31.12 0.20 0.65 16 23 N -0.52 0.04 5.99 -171.93 -1.03 -0.99 16 24 H 0.09 -0.87 8.14 -2.39 -0.02 -0.89 16 25 H 0.09 -1.04 8.14 -2.38 -0.02 -1.06 16 26 H 0.10 -0.91 7.26 -2.39 -0.02 -0.93 16 27 H 0.10 -0.53 6.65 -2.39 -0.02 -0.54 16 28 H 0.40 -3.83 8.74 -74.06 -0.65 -4.47 16 29 H -0.30 -3.16 5.87 99.48 0.58 -2.58 16 30 H -0.30 -2.24 7.11 99.48 0.71 -1.53 16 31 H 0.05 0.78 7.36 -2.38 -0.02 0.77 16 32 H 0.08 0.98 6.67 -2.39 -0.02 0.96 16 33 H 0.06 1.07 6.48 -2.39 -0.02 1.06 16 34 H 0.41 -1.99 7.83 -92.70 -0.73 -2.71 16 35 H 0.06 0.17 8.14 -2.39 -0.02 0.15 16 36 H 0.10 0.03 5.72 -2.39 -0.01 0.02 16 37 H 0.06 -0.08 6.43 -2.38 -0.02 -0.10 16 38 H 0.05 -0.10 8.14 -2.39 -0.02 -0.12 16 39 H 0.06 -0.19 6.00 -2.39 -0.01 -0.20 16 40 H 0.06 -0.15 8.14 -2.38 -0.02 -0.16 16 41 H 0.05 -0.09 8.14 -2.38 -0.02 -0.11 16 42 H 0.05 -0.04 8.05 -2.39 -0.02 -0.06 16 43 H 0.06 -0.23 7.61 -2.39 -0.02 -0.25 16 44 H 0.05 -0.15 8.14 -2.38 -0.02 -0.17 16 45 H 0.06 -0.23 8.14 -2.39 -0.02 -0.25 16 46 H 0.10 -0.39 6.02 -2.39 -0.01 -0.41 16 47 H 0.08 -0.41 8.14 -2.39 -0.02 -0.43 16 48 H 0.43 -3.46 8.19 -92.71 -0.76 -4.22 16 Total: 0.00 -23.31 368.83 0.64 -22.67 By element: Atomic # 1 Polarization: -16.96 SS G_CDS: -1.23 Total: -18.19 kcal Atomic # 6 Polarization: 4.98 SS G_CDS: 4.84 Total: 9.82 kcal Atomic # 7 Polarization: -1.25 SS G_CDS: -3.36 Total: -4.61 kcal Atomic # 8 Polarization: -11.19 SS G_CDS: -1.79 Total: -12.97 kcal Atomic # 14 Polarization: 1.10 SS G_CDS: 2.18 Total: 3.28 kcal Total: -23.31 0.64 -22.67 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664192_12297754.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 7.785 kcal (2) G-P(sol) polarization free energy of solvation -23.313 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -15.528 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.639 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.674 kcal (6) G-S(sol) free energy of system = (1) + (5) -14.889 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds