Wall clock time and date at job start Sun Mar 7 2021 13:39:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 C 1.53003 * 109.47197 * 2 1 4 4 C 1.52995 * 109.47490 * 239.99785 * 2 1 3 5 5 C 1.53007 * 109.46922 * 119.99650 * 2 1 3 6 6 H 1.08995 * 112.85140 * 292.51994 * 5 2 1 7 7 C 1.53787 * 113.60935 * 63.71227 * 5 2 1 8 8 C 1.53783 * 87.07796 * 140.06552 * 7 5 2 9 9 H 1.08999 * 113.61573 * 220.01791 * 8 7 5 10 10 N 1.46499 * 113.61584 * 89.19804 * 8 7 5 11 11 C 1.34774 * 119.99984 * 154.99673 * 10 8 7 12 12 O 1.21552 * 120.00268 * 0.02562 * 11 10 8 13 13 C 1.47847 * 120.00013 * 179.97438 * 11 10 8 14 14 C 1.39546 * 120.13943 * 0.02562 * 13 11 10 15 15 C 1.38076 * 119.84413 * 180.02562 * 14 13 11 16 16 Br 1.89097 * 119.93948 * 179.97438 * 15 14 13 17 17 C 1.38431 * 120.11903 * 0.02562 * 15 14 13 18 18 C 1.38362 * 120.28638 * 359.97438 * 17 15 14 19 19 C 1.50693 * 119.92114 * 180.02562 * 18 17 15 20 20 O 1.42906 * 109.47249 * 245.00099 * 19 18 17 21 21 Si 1.86296 * 109.47304 * 4.99888 * 19 18 17 22 22 C 1.37944 * 120.15524 * 359.72103 * 18 17 15 23 23 C 1.53783 * 113.61241 * 161.31619 * 5 2 1 24 24 H 1.08999 * 109.46978 * 300.00593 * 1 2 3 25 25 H 1.09000 * 109.46372 * 60.00180 * 1 2 3 26 26 H 1.08997 * 109.47105 * 179.97438 * 1 2 3 27 27 H 1.08998 * 109.47113 * 179.97438 * 3 2 1 28 28 H 1.08998 * 109.46930 * 299.99611 * 3 2 1 29 29 H 1.09001 * 109.46957 * 60.00105 * 3 2 1 30 30 H 1.09007 * 109.46868 * 293.50790 * 4 2 1 31 31 H 1.09003 * 109.47199 * 53.50118 * 4 2 1 32 32 H 1.08997 * 109.47509 * 173.50756 * 4 2 1 33 33 H 1.08999 * 113.60983 * 254.61240 * 7 5 2 34 34 H 1.08999 * 113.61823 * 25.51846 * 7 5 2 35 35 H 0.96996 * 119.99916 * 335.00135 * 10 8 7 36 36 H 1.08002 * 120.07759 * 0.02562 * 14 13 11 37 37 H 1.08000 * 119.85378 * 180.02562 * 17 15 14 38 38 H 1.09006 * 109.47305 * 125.00006 * 19 18 17 39 39 H 0.96693 * 113.99784 * 59.99783 * 20 19 18 40 40 H 1.48505 * 110.00100 * 179.97438 * 21 19 18 41 41 H 1.48496 * 110.00340 * 301.32015 * 21 19 18 42 42 H 1.07994 * 120.06630 * 180.27678 * 22 18 17 43 43 H 1.08998 * 113.61516 * 334.48972 * 23 5 2 44 44 H 1.09005 * 113.60984 * 105.39229 * 23 5 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 6 2.0401 -0.7213 -1.2491 5 6 2.0400 -0.7212 1.2494 6 1 1.8184 -0.1813 2.1699 7 6 1.6569 -2.2097 1.3008 8 6 3.0664 -2.4723 1.8569 9 1 3.5330 -3.3724 1.4568 10 7 3.1453 -2.3918 3.3176 11 6 4.1125 -3.0589 3.9779 12 8 4.9196 -3.7269 3.3615 13 6 4.1926 -2.9773 5.4520 14 6 3.2679 -2.2109 6.1625 15 6 3.3486 -2.1385 7.5390 16 35 2.0974 -1.1002 8.5045 17 6 4.3445 -2.8238 8.2134 18 6 5.2640 -3.5853 7.5141 19 6 6.3444 -4.3284 8.2566 20 8 7.6208 -3.7914 7.9037 21 14 6.0780 -4.1422 10.0910 22 6 5.1903 -3.6708 6.1392 23 6 3.5038 -1.1801 1.1413 24 1 -0.3633 0.5139 0.8899 25 1 -0.3632 0.5138 -0.8900 26 1 -0.3633 -1.0276 -0.0005 27 1 3.1301 1.4425 0.0005 28 1 1.6768 1.9563 -0.8900 29 1 1.6767 1.9563 0.8900 30 1 1.7748 -1.7770 -1.1929 31 1 1.5850 -0.2790 -2.1354 32 1 3.1239 -0.6217 -1.3091 33 1 0.8594 -2.4310 2.0101 34 1 1.4858 -2.6508 0.3188 35 1 2.5015 -1.8586 3.8094 36 1 2.4909 -1.6756 5.6370 37 1 4.4034 -2.7646 9.2902 38 1 6.3082 -5.3847 7.9896 39 1 7.7242 -2.8531 8.1132 40 1 7.1367 -4.8712 10.8346 41 1 6.0934 -2.7047 10.4631 42 1 5.9061 -4.2691 5.5952 43 1 3.8367 -1.3401 0.1158 44 1 4.1963 -0.5707 1.7221 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17664192_12335870.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 13:39:09 Heat of formation + Delta-G solvation = -14.384572 kcal Electronic energy + Delta-G solvation = -25100.846940 eV Core-core repulsion = 21452.675125 eV Total energy + Delta-G solvation = -3648.171814 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.077 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -41.89548 -40.93498 -39.67886 -37.83057 -36.58569 -34.23014 -33.64470 -32.58012 -30.47750 -28.45122 -28.20035 -27.10457 -26.52406 -26.23072 -24.82376 -22.85036 -21.73196 -21.23070 -19.24041 -19.08218 -17.97151 -17.68606 -17.27381 -16.66151 -16.48747 -16.35631 -16.01650 -15.82147 -15.65645 -15.11821 -15.03190 -14.96538 -14.34414 -14.24663 -14.15783 -13.79468 -13.51234 -13.31933 -13.17916 -13.05595 -12.77928 -12.69583 -12.39537 -12.30047 -12.01625 -11.97506 -11.85323 -11.82895 -11.50986 -11.33527 -11.18089 -11.10955 -10.87827 -10.70852 -10.39512 -10.09416 -9.92345 -4.97506 -0.53893 -0.18004 0.41758 1.20223 1.48946 1.54312 1.87995 1.95395 2.43481 3.23740 3.30887 3.43447 3.53112 3.55952 3.74951 3.79633 3.84214 3.86859 3.94355 4.08358 4.18322 4.25748 4.29955 4.30332 4.53781 4.55461 4.71685 4.74286 4.75105 4.79186 4.83449 4.83865 4.90936 4.97460 4.99663 5.03929 5.06887 5.13674 5.15177 5.22650 5.25057 5.34982 5.41844 5.45887 5.52134 5.67670 6.34028 6.41717 7.01219 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.140 4.140 2 C -0.057 4.057 3 C -0.142 4.142 4 C -0.149 4.149 5 C -0.090 4.090 6 H 0.096 0.904 7 C -0.132 4.132 8 C 0.111 3.889 9 H 0.083 0.917 10 N -0.692 5.692 11 C 0.561 3.439 12 O -0.572 6.572 13 C -0.136 4.136 14 C -0.043 4.043 15 C -0.099 4.099 16 Br -0.028 7.028 17 C -0.062 4.062 18 C -0.112 4.112 19 C -0.084 4.084 20 O -0.545 6.545 21 Si 0.764 3.236 22 C -0.028 4.028 23 C -0.150 4.150 24 H 0.056 0.944 25 H 0.050 0.950 26 H 0.059 0.941 27 H 0.050 0.950 28 H 0.052 0.948 29 H 0.056 0.944 30 H 0.063 0.937 31 H 0.052 0.948 32 H 0.056 0.944 33 H 0.084 0.916 34 H 0.104 0.896 35 H 0.413 0.587 36 H 0.161 0.839 37 H 0.156 0.844 38 H 0.130 0.870 39 H 0.388 0.612 40 H -0.297 1.297 41 H -0.272 1.272 42 H 0.131 0.869 43 H 0.098 0.902 44 H 0.059 0.941 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.826 2.158 1.506 6.393 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.197 4.197 2 C -0.057 4.057 3 C -0.199 4.199 4 C -0.206 4.206 5 C -0.109 4.109 6 H 0.114 0.886 7 C -0.170 4.170 8 C 0.005 3.995 9 H 0.101 0.899 10 N -0.343 5.343 11 C 0.349 3.651 12 O -0.453 6.453 13 C -0.140 4.140 14 C -0.064 4.064 15 C -0.178 4.178 16 Br 0.058 6.942 17 C -0.081 4.081 18 C -0.114 4.114 19 C -0.193 4.193 20 O -0.354 6.354 21 Si 0.668 3.332 22 C -0.048 4.048 23 C -0.188 4.188 24 H 0.075 0.925 25 H 0.070 0.930 26 H 0.078 0.922 27 H 0.069 0.931 28 H 0.071 0.929 29 H 0.075 0.925 30 H 0.082 0.918 31 H 0.071 0.929 32 H 0.075 0.925 33 H 0.102 0.898 34 H 0.122 0.878 35 H 0.252 0.748 36 H 0.178 0.822 37 H 0.173 0.827 38 H 0.148 0.852 39 H 0.237 0.763 40 H -0.225 1.225 41 H -0.198 1.198 42 H 0.149 0.851 43 H 0.116 0.884 44 H 0.078 0.922 Dipole moment (debyes) X Y Z Total from point charges -5.339 1.779 1.953 5.957 hybrid contribution 1.041 0.810 -0.683 1.485 sum -4.298 2.589 1.270 5.176 Atomic orbital electron populations 1.21839 0.94128 1.02061 1.01719 1.20407 0.95684 0.95071 0.94549 1.21852 1.00778 0.95541 1.01726 1.22049 1.00988 1.00706 0.96896 1.22607 0.94765 0.95053 0.98446 0.88625 1.23409 0.94913 0.96139 1.02505 1.21974 0.99195 0.99126 0.79159 0.89906 1.45481 1.31647 1.49904 1.07308 1.18361 0.80739 0.78732 0.87254 1.90799 1.42005 1.42736 1.69725 1.19855 0.99165 1.02523 0.92418 1.21445 0.97212 0.95416 0.92310 1.21731 0.98695 1.02705 0.94688 1.96860 1.55350 1.68409 1.73609 1.21428 0.92242 0.93416 1.01038 1.20250 0.97981 0.99505 0.93646 1.25312 0.81946 1.01023 1.10991 1.86619 1.32721 1.31037 1.84982 0.94117 0.87569 0.80106 0.71447 1.21272 0.95075 0.94707 0.93733 1.23633 0.97293 0.96398 1.01483 0.92466 0.93046 0.92169 0.93080 0.92907 0.92526 0.91838 0.92877 0.92543 0.89781 0.87788 0.74835 0.82200 0.82655 0.85200 0.76275 1.22511 1.19777 0.85087 0.88369 0.92199 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 0.58 8.31 71.98 0.60 1.18 16 2 C -0.06 0.22 0.68 -52.18 -0.04 0.18 16 3 C -0.14 0.37 8.43 71.98 0.61 0.98 16 4 C -0.15 0.47 7.49 71.98 0.54 1.01 16 5 C -0.09 0.43 2.91 -10.26 -0.03 0.40 16 6 H 0.10 -0.58 8.14 -2.39 -0.02 -0.60 16 7 C -0.13 0.66 6.40 31.12 0.20 0.86 16 8 C 0.11 -0.05 4.33 45.61 0.20 0.14 16 9 H 0.08 0.36 7.46 -2.39 -0.02 0.34 16 10 N -0.69 0.80 5.22 -442.47 -2.31 -1.51 16 11 C 0.56 2.88 7.77 86.79 0.67 3.56 16 12 O -0.57 -7.99 15.95 -3.88 -0.06 -8.05 16 13 C -0.14 -0.21 5.87 -20.09 -0.12 -0.32 16 14 C -0.04 0.14 9.28 22.55 0.21 0.35 16 15 C -0.10 0.26 6.22 22.28 0.14 0.40 16 16 Br -0.03 0.08 33.69 -20.37 -0.69 -0.60 16 17 C -0.06 0.18 8.40 22.35 0.19 0.37 16 18 C -0.11 0.12 5.34 -19.91 -0.11 0.01 16 19 C -0.08 0.14 2.80 71.23 0.20 0.34 16 20 O -0.55 -1.15 12.84 -148.98 -1.91 -3.06 16 21 Si 0.76 -2.75 29.87 68.60 2.05 -0.70 16 22 C -0.03 -0.08 9.23 22.53 0.21 0.13 16 23 C -0.15 0.23 7.10 31.21 0.22 0.45 16 24 H 0.06 -0.25 8.14 -2.39 -0.02 -0.27 16 25 H 0.05 -0.16 8.14 -2.39 -0.02 -0.18 16 26 H 0.06 -0.28 7.57 -2.39 -0.02 -0.30 16 27 H 0.05 -0.08 8.10 -2.39 -0.02 -0.10 16 28 H 0.05 -0.10 8.14 -2.39 -0.02 -0.12 16 29 H 0.06 -0.17 8.14 -2.39 -0.02 -0.19 16 30 H 0.06 -0.25 6.05 -2.38 -0.01 -0.26 16 31 H 0.05 -0.13 8.14 -2.39 -0.02 -0.15 16 32 H 0.06 -0.14 6.46 -2.39 -0.02 -0.15 16 33 H 0.08 -0.56 8.14 -2.39 -0.02 -0.58 16 34 H 0.10 -0.55 6.09 -2.39 -0.01 -0.56 16 35 H 0.41 -2.89 6.74 -92.71 -0.62 -3.52 16 36 H 0.16 -1.35 6.40 -2.91 -0.02 -1.37 16 37 H 0.16 -0.93 4.82 -2.91 -0.01 -0.94 16 38 H 0.13 -0.38 7.96 -2.38 -0.02 -0.40 16 39 H 0.39 -1.51 8.70 -74.06 -0.64 -2.16 16 40 H -0.30 -1.29 7.11 99.48 0.71 -0.58 16 41 H -0.27 0.24 7.00 99.48 0.70 0.94 16 42 H 0.13 0.78 7.65 -2.91 -0.02 0.76 16 43 H 0.10 -0.13 5.70 -2.39 -0.01 -0.15 16 44 H 0.06 0.04 8.14 -2.38 -0.02 0.02 16 Total: 0.00 -14.96 367.08 0.56 -14.40 By element: Atomic # 1 Polarization: -10.30 SS G_CDS: -0.21 Total: -10.51 kcal Atomic # 6 Polarization: 6.35 SS G_CDS: 3.69 Total: 10.04 kcal Atomic # 7 Polarization: 0.80 SS G_CDS: -2.31 Total: -1.51 kcal Atomic # 8 Polarization: -9.14 SS G_CDS: -1.97 Total: -11.11 kcal Atomic # 14 Polarization: -2.75 SS G_CDS: 2.05 Total: -0.70 kcal Atomic # 35 Polarization: 0.08 SS G_CDS: -0.69 Total: -0.60 kcal Total: -14.96 0.56 -14.40 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664192_12335870.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 0.018 kcal (2) G-P(sol) polarization free energy of solvation -14.965 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -14.947 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.563 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.402 kcal (6) G-S(sol) free energy of system = (1) + (5) -14.385 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds