Wall clock time and date at job start Sun Mar 7 2021 13:39:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.53001 * 109.46819 * 2 1 4 4 C 1.53001 * 109.47460 * 239.99816 * 2 1 3 5 5 C 1.52996 * 109.47153 * 119.99419 * 2 1 3 6 6 H 1.09003 * 112.85171 * 292.36958 * 5 2 1 7 7 C 1.53777 * 113.61387 * 63.56096 * 5 2 1 8 8 C 1.53779 * 87.08167 * 140.06567 * 7 5 2 9 9 H 1.09001 * 113.61978 * 219.93742 * 8 7 5 10 10 N 1.46500 * 113.61468 * 89.11856 * 8 7 5 11 11 C 1.34782 * 120.00321 * 156.53307 * 10 8 7 12 12 O 1.21700 * 119.99661 * 359.97438 * 11 10 8 13 13 C 1.46429 * 119.99830 * 180.02562 * 11 10 8 14 14 C 1.34811 * 119.99452 * 179.72116 * 13 11 10 15 15 C 1.47204 * 119.99818 * 180.02562 * 14 13 11 16 16 C 1.39842 * 120.16942 * 359.71945 * 15 14 13 17 17 C 1.37890 * 119.82456 * 179.77384 * 16 15 14 18 18 C 1.38403 * 120.17074 * 0.52889 * 17 16 15 19 19 C 1.50699 * 119.82647 * 179.72308 * 18 17 16 20 20 O 1.42905 * 109.47144 * 244.97954 * 19 18 17 21 21 Si 1.86293 * 109.47223 * 4.98183 * 19 18 17 22 22 C 1.38407 * 120.34594 * 359.70330 * 18 17 16 23 23 C 1.37889 * 120.16928 * 0.04257 * 22 18 17 24 24 C 1.53777 * 87.17361 * 334.52742 * 8 7 5 25 25 H 1.08997 * 109.47354 * 300.00162 * 1 2 3 26 26 H 1.09000 * 109.47128 * 60.00347 * 1 2 3 27 27 H 1.09002 * 109.46719 * 180.02562 * 1 2 3 28 28 H 1.08995 * 109.47192 * 180.02562 * 3 2 1 29 29 H 1.09008 * 109.46710 * 299.99526 * 3 2 1 30 30 H 1.08997 * 109.47815 * 59.99836 * 3 2 1 31 31 H 1.09003 * 109.46809 * 293.51813 * 4 2 1 32 32 H 1.08996 * 109.46609 * 53.51213 * 4 2 1 33 33 H 1.09001 * 109.46995 * 173.51572 * 4 2 1 34 34 H 1.09005 * 113.61727 * 25.52244 * 7 5 2 35 35 H 1.08999 * 113.62457 * 254.61599 * 7 5 2 36 36 H 0.96999 * 119.99923 * 336.53249 * 10 8 7 37 37 H 1.07996 * 120.00360 * 359.97438 * 13 11 10 38 38 H 1.08003 * 120.00084 * 0.02562 * 14 13 11 39 39 H 1.07997 * 120.08438 * 0.02562 * 16 15 14 40 40 H 1.08001 * 119.91556 * 180.27840 * 17 16 15 41 41 H 1.09006 * 109.47213 * 124.98156 * 19 18 17 42 42 H 0.96697 * 114.00014 * 59.99834 * 20 19 18 43 43 H 1.48497 * 110.00303 * 180.02562 * 21 19 18 44 44 H 1.48500 * 109.99941 * 301.31915 * 21 19 18 45 45 H 1.07998 * 119.91031 * 180.02562 * 22 18 17 46 46 H 1.07999 * 120.08527 * 179.97438 * 23 22 18 47 47 H 1.09001 * 113.61522 * 140.01627 * 24 8 7 48 48 H 1.09001 * 113.61768 * 270.92623 * 24 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0401 -0.7213 -1.2492 5 6 2.0400 -0.7211 1.2493 6 1 1.8207 -0.1798 2.1697 7 6 1.6539 -2.2086 1.3027 8 6 3.0635 -2.4737 1.8572 9 1 3.5271 -3.3760 1.4584 10 7 3.1448 -2.3902 3.3176 11 6 4.1298 -3.0333 3.9756 12 8 4.9513 -3.6837 3.3566 13 6 4.2107 -2.9502 5.4353 14 6 5.1926 -3.5980 6.0938 15 6 5.2737 -3.5150 7.5613 16 6 4.3375 -2.7604 8.2753 17 6 4.4173 -2.6914 9.6501 18 6 5.4271 -3.3575 10.3226 19 6 5.5107 -3.2717 11.8248 20 8 6.7124 -2.5937 12.1970 21 14 4.0401 -2.3315 12.4759 22 6 6.3603 -4.1025 9.6226 23 6 6.2907 -4.1855 8.2480 24 6 3.5046 -1.1864 1.1411 25 1 -0.3634 0.5138 0.8899 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3633 -1.0277 0.0005 28 1 3.1299 1.4426 -0.0005 29 1 1.6766 1.9563 -0.8901 30 1 1.6766 1.9565 0.8899 31 1 1.7746 -1.7770 -1.1930 32 1 1.5851 -0.2789 -2.1353 33 1 3.1239 -0.6218 -1.3091 34 1 1.4807 -2.6504 0.3213 35 1 0.8568 -2.4278 2.0131 36 1 2.4898 -1.8721 3.8110 37 1 3.4814 -2.3734 5.9846 38 1 5.9197 -4.1779 5.5447 39 1 3.5517 -2.2365 7.7516 40 1 3.6924 -2.1128 10.2034 41 1 5.5151 -4.2769 12.2465 42 1 6.7768 -1.6913 11.8556 43 1 4.1110 -2.2393 13.9563 44 1 4.0050 -0.9701 11.8838 45 1 7.1450 -4.6198 10.1545 46 1 7.0198 -4.7668 7.7031 47 1 4.2006 -0.5805 1.7213 48 1 3.8364 -1.3489 0.1156 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664192_12360594.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 13:39:17 Heat of formation + Delta-G solvation = -11.289099 kcal Electronic energy + Delta-G solvation = -25316.336617 eV Core-core repulsion = 21724.353276 eV Total energy + Delta-G solvation = -3591.983341 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 316.183 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -41.57538 -40.74571 -39.88016 -37.93108 -36.54905 -35.08065 -33.62475 -32.27584 -31.25950 -28.54986 -28.29243 -27.43549 -26.30626 -25.94409 -24.26354 -23.82774 -22.17628 -21.17460 -20.42902 -19.18804 -18.87761 -18.16669 -17.27670 -16.90415 -16.70783 -16.37756 -16.24140 -16.01181 -15.79204 -15.55474 -15.19207 -15.11251 -14.89419 -14.61867 -14.30382 -14.12797 -13.89430 -13.86994 -13.54415 -13.31508 -13.21766 -13.05128 -12.80714 -12.76039 -12.49359 -12.31762 -12.12668 -12.08933 -11.92378 -11.64710 -11.40597 -11.36679 -11.16219 -10.91310 -10.88663 -10.65979 -10.06802 -10.00636 -9.30993 -5.02576 -0.58848 0.30618 0.88206 1.21360 1.52354 1.90420 2.15999 2.28466 2.74901 3.29863 3.46923 3.49876 3.50887 3.59249 3.69264 3.72899 3.81248 3.84175 4.00222 4.09512 4.15220 4.20800 4.21960 4.24918 4.36592 4.48483 4.49331 4.64836 4.70618 4.70996 4.74013 4.75927 4.83301 4.88229 4.88660 4.93966 4.97383 5.01926 5.06200 5.07820 5.09192 5.13582 5.20739 5.31220 5.33222 5.40001 5.41800 5.44295 5.54695 5.67717 5.81051 6.32926 6.52879 7.27241 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.141 4.141 2 C -0.060 4.060 3 C -0.141 4.141 4 C -0.148 4.148 5 C -0.098 4.098 6 H 0.087 0.913 7 C -0.143 4.143 8 C 0.119 3.881 9 H 0.101 0.899 10 N -0.709 5.709 11 C 0.550 3.450 12 O -0.542 6.542 13 C -0.214 4.214 14 C -0.015 4.015 15 C -0.072 4.072 16 C -0.096 4.096 17 C -0.120 4.120 18 C -0.106 4.106 19 C -0.078 4.078 20 O -0.528 6.528 21 Si 0.687 3.313 22 C -0.094 4.094 23 C -0.092 4.092 24 C -0.151 4.151 25 H 0.053 0.947 26 H 0.054 0.946 27 H 0.056 0.944 28 H 0.055 0.945 29 H 0.054 0.946 30 H 0.053 0.947 31 H 0.059 0.941 32 H 0.055 0.945 33 H 0.059 0.941 34 H 0.099 0.901 35 H 0.072 0.928 36 H 0.401 0.599 37 H 0.130 0.870 38 H 0.138 0.862 39 H 0.131 0.869 40 H 0.130 0.870 41 H 0.120 0.880 42 H 0.376 0.624 43 H -0.257 1.257 44 H -0.260 1.260 45 H 0.130 0.870 46 H 0.132 0.868 47 H 0.068 0.932 48 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.565 1.378 0.113 4.770 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.198 4.198 2 C -0.060 4.060 3 C -0.198 4.198 4 C -0.205 4.205 5 C -0.117 4.117 6 H 0.105 0.895 7 C -0.181 4.181 8 C 0.013 3.987 9 H 0.119 0.881 10 N -0.359 5.359 11 C 0.339 3.661 12 O -0.420 6.420 13 C -0.235 4.235 14 C -0.035 4.035 15 C -0.072 4.072 16 C -0.114 4.114 17 C -0.138 4.138 18 C -0.106 4.106 19 C -0.188 4.188 20 O -0.335 6.335 21 Si 0.588 3.412 22 C -0.112 4.112 23 C -0.110 4.110 24 C -0.189 4.189 25 H 0.072 0.928 26 H 0.073 0.927 27 H 0.075 0.925 28 H 0.074 0.926 29 H 0.073 0.927 30 H 0.072 0.928 31 H 0.077 0.923 32 H 0.074 0.926 33 H 0.078 0.922 34 H 0.117 0.883 35 H 0.090 0.910 36 H 0.236 0.764 37 H 0.148 0.852 38 H 0.156 0.844 39 H 0.149 0.851 40 H 0.148 0.852 41 H 0.138 0.862 42 H 0.224 0.776 43 H -0.182 1.182 44 H -0.185 1.185 45 H 0.148 0.852 46 H 0.150 0.850 47 H 0.087 0.913 48 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges -4.149 1.050 0.404 4.299 hybrid contribution 0.594 1.032 -0.025 1.191 sum -3.554 2.082 0.379 4.137 Atomic orbital electron populations 1.21849 0.94432 1.01830 1.01723 1.20430 0.95520 0.95377 0.94628 1.21848 1.01080 0.95223 1.01696 1.22037 1.01197 1.00427 0.96849 1.22686 0.95945 0.94924 0.98119 0.89472 1.23442 0.96040 0.96490 1.02146 1.21828 0.97559 0.99513 0.79769 0.88084 1.45557 1.30921 1.52434 1.06983 1.18337 0.80895 0.78831 0.88027 1.90837 1.40219 1.41473 1.69519 1.22888 1.02127 1.05228 0.93215 1.22413 0.95721 0.93540 0.91838 1.19074 0.96574 0.99002 0.92554 1.21354 0.98337 0.97905 0.93780 1.21000 0.98205 1.00018 0.94571 1.20460 0.95988 0.98007 0.96164 1.25080 0.96905 1.03748 0.93033 1.86618 1.38646 1.31248 1.76950 0.94957 0.83916 0.81976 0.80334 1.21006 0.98408 0.98068 0.93732 1.21470 0.97199 0.98038 0.94324 1.23642 0.96551 0.97061 1.01688 0.92772 0.92674 0.92538 0.92618 0.92668 0.92786 0.92254 0.92634 0.92223 0.88297 0.90951 0.76423 0.85202 0.84438 0.85093 0.85226 0.86234 0.77601 1.18160 1.18505 0.85170 0.85028 0.91278 0.88474 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 0.20 8.31 37.16 0.31 0.51 16 2 C -0.06 0.09 0.68 -154.51 -0.11 -0.02 16 3 C -0.14 0.14 8.43 37.16 0.31 0.46 16 4 C -0.15 0.19 7.49 37.16 0.28 0.47 16 5 C -0.10 0.17 2.92 -89.67 -0.26 -0.09 16 6 H 0.09 -0.17 8.14 -51.93 -0.42 -0.59 16 7 C -0.14 0.26 6.39 -25.92 -0.17 0.09 16 8 C 0.12 -0.01 4.30 -67.12 -0.29 -0.30 16 9 H 0.10 0.19 7.50 -51.93 -0.39 -0.19 16 10 N -0.71 0.31 5.26 -54.41 -0.29 0.02 16 11 C 0.55 1.16 7.74 -12.96 -0.10 1.06 16 12 O -0.54 -3.38 15.85 5.19 0.08 -3.30 16 13 C -0.21 0.05 9.41 -37.50 -0.35 -0.30 16 14 C -0.02 -0.01 9.46 -37.16 -0.35 -0.36 16 15 C -0.07 0.00 5.87 -105.06 -0.62 -0.61 16 16 C -0.10 0.10 9.41 -39.11 -0.37 -0.27 16 17 C -0.12 0.14 8.65 -39.65 -0.34 -0.21 16 18 C -0.11 0.05 5.36 -104.50 -0.56 -0.51 16 19 C -0.08 0.06 2.80 36.01 0.10 0.16 16 20 O -0.53 -0.45 12.83 -35.23 -0.45 -0.90 16 21 Si 0.69 -1.03 29.87 -169.99 -5.08 -6.11 16 22 C -0.09 0.00 9.66 -39.65 -0.38 -0.38 16 23 C -0.09 0.01 9.80 -39.11 -0.38 -0.37 16 24 C -0.15 0.08 7.12 -25.78 -0.18 -0.10 16 25 H 0.05 -0.08 8.14 -51.93 -0.42 -0.50 16 26 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 27 H 0.06 -0.09 7.56 -51.93 -0.39 -0.48 16 28 H 0.05 -0.04 8.11 -51.93 -0.42 -0.46 16 29 H 0.05 -0.05 8.14 -51.92 -0.42 -0.47 16 30 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 31 H 0.06 -0.09 6.06 -51.93 -0.31 -0.41 16 32 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 33 H 0.06 -0.07 6.47 -51.93 -0.34 -0.40 16 34 H 0.10 -0.19 6.10 -51.93 -0.32 -0.51 16 35 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 36 H 0.40 -1.23 8.68 -40.82 -0.35 -1.59 16 37 H 0.13 -0.40 6.07 -52.49 -0.32 -0.72 16 38 H 0.14 0.15 7.52 -52.48 -0.39 -0.25 16 39 H 0.13 -0.42 6.17 -52.49 -0.32 -0.74 16 40 H 0.13 -0.36 4.81 -52.49 -0.25 -0.61 16 41 H 0.12 -0.17 7.96 -51.93 -0.41 -0.59 16 42 H 0.38 -0.72 8.70 45.56 0.40 -0.32 16 43 H -0.26 -0.51 7.11 56.52 0.40 -0.10 16 44 H -0.26 -0.07 7.00 56.52 0.40 0.33 16 45 H 0.13 -0.08 8.06 -52.49 -0.42 -0.51 16 46 H 0.13 -0.20 8.06 -52.49 -0.42 -0.62 16 47 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 48 H 0.10 -0.06 5.71 -51.93 -0.30 -0.36 16 LS Contribution 380.38 15.07 5.73 5.73 Total: 0.00 -6.79 380.38 -11.02 -17.81 By element: Atomic # 1 Polarization: -4.94 SS G_CDS: -7.56 Total: -12.50 kcal Atomic # 6 Polarization: 2.71 SS G_CDS: -3.46 Total: -0.76 kcal Atomic # 7 Polarization: 0.31 SS G_CDS: -0.29 Total: 0.02 kcal Atomic # 8 Polarization: -3.83 SS G_CDS: -0.37 Total: -4.20 kcal Atomic # 14 Polarization: -1.03 SS G_CDS: -5.08 Total: -6.11 kcal Total LS contribution 5.73 Total: 5.73 kcal Total: -6.79 -11.02 -17.81 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664192_12360594.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 6.523 kcal (2) G-P(sol) polarization free energy of solvation -6.790 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -0.267 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.022 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.812 kcal (6) G-S(sol) free energy of system = (1) + (5) -11.289 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds