Wall clock time and date at job start Sun Mar 7 2021 13:39:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.52999 * 109.47013 * 2 1 4 4 C 1.52999 * 109.47403 * 239.99901 * 2 1 3 5 5 C 1.53003 * 109.47389 * 119.99921 * 2 1 3 6 6 H 1.08999 * 112.84778 * 292.53245 * 5 2 1 7 7 C 1.53785 * 113.61141 * 63.72305 * 5 2 1 8 8 C 1.53790 * 87.07759 * 139.98329 * 7 5 2 9 9 H 1.08993 * 113.60991 * 220.01728 * 8 7 5 10 10 N 1.46500 * 113.61441 * 89.11863 * 8 7 5 11 11 C 1.34768 * 120.00225 * 155.00063 * 10 8 7 12 12 O 1.21565 * 119.99961 * 359.97438 * 11 10 8 13 13 C 1.47700 * 120.00062 * 179.97438 * 11 10 8 14 14 C 1.39809 * 120.15510 * 179.71911 * 13 11 10 15 15 F 1.35106 * 120.08199 * 359.97438 * 14 13 11 16 16 C 1.38311 * 119.83273 * 179.74611 * 14 13 11 17 17 C 1.38186 * 120.14127 * 0.53310 * 16 14 13 18 18 C 1.50700 * 119.84205 * 179.76694 * 17 16 14 19 19 O 1.42899 * 109.47159 * 254.97759 * 18 17 16 20 20 Si 1.86306 * 109.47074 * 14.97838 * 18 17 16 21 21 C 1.38651 * 120.31823 * 359.74225 * 17 16 14 22 22 F 1.35102 * 119.91958 * 180.02562 * 21 17 16 23 23 C 1.38069 * 120.16778 * 359.97438 * 21 17 16 24 24 C 1.53780 * 113.61685 * 161.33446 * 5 2 1 25 25 H 1.09004 * 109.47090 * 299.99901 * 1 2 3 26 26 H 1.08998 * 109.47164 * 60.00385 * 1 2 3 27 27 H 1.09008 * 109.46767 * 180.02562 * 1 2 3 28 28 H 1.09005 * 109.47276 * 180.02562 * 3 2 1 29 29 H 1.09000 * 109.47219 * 299.99438 * 3 2 1 30 30 H 1.08992 * 109.47373 * 60.00460 * 3 2 1 31 31 H 1.09001 * 109.46845 * 293.50030 * 4 2 1 32 32 H 1.09006 * 109.46723 * 53.49355 * 4 2 1 33 33 H 1.08993 * 109.47904 * 173.49782 * 4 2 1 34 34 H 1.08999 * 113.61778 * 254.52760 * 7 5 2 35 35 H 1.08999 * 113.61333 * 25.35382 * 7 5 2 36 36 H 0.97006 * 119.99615 * 334.99718 * 10 8 7 37 37 H 1.07997 * 119.92707 * 180.27869 * 16 14 13 38 38 H 1.08997 * 109.47115 * 134.97472 * 18 17 16 39 39 H 0.96699 * 113.99579 * 59.99723 * 19 18 17 40 40 H 1.48496 * 110.00168 * 58.68067 * 20 18 17 41 41 H 1.48493 * 110.00090 * 180.02562 * 20 18 17 42 42 H 1.07997 * 120.07756 * 179.97438 * 23 21 17 43 43 H 1.09001 * 113.61318 * 334.56080 * 24 5 2 44 44 H 1.08995 * 113.61448 * 105.47259 * 24 5 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0401 -0.7213 -1.2492 5 6 2.0401 -0.7212 1.2493 6 1 1.8183 -0.1814 2.1698 7 6 1.6573 -2.2098 1.3006 8 6 3.0676 -2.4724 1.8547 9 1 3.5337 -3.3722 1.4535 10 7 3.1489 -2.3907 3.3151 11 6 4.1169 -3.0574 3.9745 12 8 4.9224 -3.7270 3.3574 13 6 4.1992 -2.9747 5.4469 14 6 5.1985 -3.6697 6.1346 15 9 6.0924 -4.4202 5.4541 16 6 5.2726 -3.5832 7.5131 17 6 4.3551 -2.8210 8.2108 18 6 4.4390 -2.7358 9.7130 19 8 3.4050 -3.5331 10.2938 20 14 6.0993 -3.3635 10.2790 21 6 3.3581 -2.1339 7.5354 22 9 2.4657 -1.3906 8.2256 23 6 3.2757 -2.2063 6.1590 24 6 3.5040 -1.1797 1.1414 25 1 -0.3633 0.5138 0.8900 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3633 -1.0278 0.0005 28 1 3.1300 1.4426 -0.0005 29 1 1.6767 1.9563 -0.8900 30 1 1.6767 1.9563 0.8899 31 1 1.7748 -1.7770 -1.1929 32 1 1.5847 -0.2790 -2.1354 33 1 3.1238 -0.6216 -1.3094 34 1 0.8608 -2.4317 2.0109 35 1 1.4836 -2.6500 0.3187 36 1 2.5060 -1.8567 3.8076 37 1 6.0467 -4.1158 8.0455 38 1 4.3169 -1.6987 10.0255 39 1 3.4514 -4.4698 10.0581 40 1 7.1841 -2.5627 9.6569 41 1 6.1944 -3.2853 11.7588 42 1 2.4982 -1.6708 5.6345 43 1 3.8374 -1.3383 0.1158 44 1 4.1961 -0.5711 1.7234 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17664192_12360598.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 13:39:19 Heat of formation + Delta-G solvation = -104.321011 kcal Electronic energy + Delta-G solvation = -28112.414617 eV Core-core repulsion = 23861.252918 eV Total energy + Delta-G solvation = -4251.161699 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 326.148 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -50.13532 -50.10856 -41.81060 -40.69913 -39.66400 -37.65159 -36.58947 -34.29509 -32.78356 -31.39578 -28.45805 -28.22520 -27.99435 -26.25482 -25.93317 -24.41422 -23.85671 -22.10202 -21.25396 -19.71471 -19.13677 -18.81143 -18.49276 -17.95043 -17.41480 -17.05544 -16.80853 -16.61195 -16.38545 -16.13900 -15.91280 -15.91154 -15.71423 -15.51481 -15.15264 -15.09540 -14.73638 -14.27382 -14.18499 -13.84471 -13.79690 -13.53801 -13.23262 -13.15879 -13.01650 -12.77671 -12.69636 -12.39978 -12.36404 -12.18719 -12.01507 -11.85598 -11.39629 -11.19157 -11.11527 -10.87999 -10.62540 -10.60265 -10.16730 -9.84306 -5.05683 -0.83759 -0.33163 1.15311 1.36008 1.61667 1.80794 1.93134 2.21032 2.76654 2.81939 3.09781 3.26998 3.46901 3.51728 3.54255 3.55711 3.75210 3.79245 3.85005 4.07821 4.13462 4.27463 4.29738 4.30083 4.31503 4.49837 4.55837 4.66852 4.68762 4.73804 4.75053 4.78623 4.82955 4.84283 4.97178 4.99019 5.03721 5.12472 5.14842 5.21988 5.24482 5.35369 5.40774 5.44903 5.51504 5.66967 6.28532 6.67691 6.96479 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.140 4.140 2 C -0.057 4.057 3 C -0.142 4.142 4 C -0.149 4.149 5 C -0.091 4.091 6 H 0.096 0.904 7 C -0.132 4.132 8 C 0.111 3.889 9 H 0.084 0.916 10 N -0.690 5.690 11 C 0.559 3.441 12 O -0.560 6.560 13 C -0.149 4.149 14 C 0.142 3.858 15 F -0.122 7.122 16 C -0.119 4.119 17 C -0.096 4.096 18 C -0.078 4.078 19 O -0.546 6.546 20 Si 0.779 3.221 21 C 0.100 3.900 22 F -0.130 7.130 23 C -0.078 4.078 24 C -0.150 4.150 25 H 0.056 0.944 26 H 0.050 0.950 27 H 0.059 0.941 28 H 0.051 0.949 29 H 0.051 0.949 30 H 0.055 0.945 31 H 0.063 0.937 32 H 0.052 0.948 33 H 0.056 0.944 34 H 0.084 0.916 35 H 0.104 0.896 36 H 0.414 0.586 37 H 0.182 0.818 38 H 0.114 0.886 39 H 0.399 0.601 40 H -0.280 1.280 41 H -0.290 1.290 42 H 0.177 0.823 43 H 0.099 0.901 44 H 0.060 0.940 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.094 0.239 0.098 3.105 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.198 4.198 2 C -0.057 4.057 3 C -0.199 4.199 4 C -0.206 4.206 5 C -0.110 4.110 6 H 0.114 0.886 7 C -0.170 4.170 8 C 0.006 3.994 9 H 0.103 0.897 10 N -0.342 5.342 11 C 0.346 3.654 12 O -0.439 6.439 13 C -0.153 4.153 14 C 0.121 3.879 15 F -0.100 7.100 16 C -0.137 4.137 17 C -0.098 4.098 18 C -0.187 4.187 19 O -0.354 6.354 20 Si 0.683 3.317 21 C 0.080 3.920 22 F -0.108 7.108 23 C -0.098 4.098 24 C -0.188 4.188 25 H 0.075 0.925 26 H 0.069 0.931 27 H 0.078 0.922 28 H 0.070 0.930 29 H 0.071 0.929 30 H 0.074 0.926 31 H 0.082 0.918 32 H 0.071 0.929 33 H 0.075 0.925 34 H 0.102 0.898 35 H 0.123 0.877 36 H 0.253 0.747 37 H 0.199 0.801 38 H 0.131 0.869 39 H 0.250 0.750 40 H -0.207 1.207 41 H -0.218 1.218 42 H 0.195 0.805 43 H 0.117 0.883 44 H 0.079 0.921 Dipole moment (debyes) X Y Z Total from point charges -1.989 0.526 0.289 2.077 hybrid contribution -0.511 0.909 -0.046 1.044 sum -2.500 1.435 0.243 2.893 Atomic orbital electron populations 1.21842 0.94177 1.02061 1.01691 1.20405 0.95645 0.95073 0.94598 1.21852 1.00809 0.95550 1.01698 1.22049 1.01015 1.00712 0.96862 1.22617 0.94831 0.95077 0.98443 0.88608 1.23411 0.94890 0.96105 1.02558 1.21968 0.99209 0.99233 0.78953 0.89733 1.45447 1.31497 1.49792 1.07419 1.18075 0.81277 0.79358 0.86649 1.90866 1.41660 1.42020 1.69338 1.19821 0.98834 1.03148 0.93516 1.17801 0.88124 0.91942 0.90039 1.91615 1.65206 1.73058 1.80104 1.20999 1.00783 1.00778 0.91159 1.20582 0.94339 0.96743 0.98121 1.25274 1.04943 1.00309 0.88175 1.86556 1.51328 1.25067 1.72487 0.93783 0.71245 0.88928 0.77726 1.17389 0.90062 0.95000 0.89534 1.91567 1.65788 1.74030 1.79413 1.21312 0.98765 0.97641 0.92047 1.23619 0.97261 0.96355 1.01557 0.92524 0.93057 0.92154 0.93029 0.92939 0.92565 0.91807 0.92909 0.92493 0.89774 0.87745 0.74730 0.80099 0.86854 0.75002 1.20669 1.21752 0.80530 0.88324 0.92101 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 0.59 8.32 71.98 0.60 1.19 16 2 C -0.06 0.23 0.68 -52.18 -0.04 0.20 16 3 C -0.14 0.39 8.43 71.98 0.61 1.00 16 4 C -0.15 0.51 7.49 71.98 0.54 1.04 16 5 C -0.09 0.47 2.91 -10.27 -0.03 0.44 16 6 H 0.10 -0.62 8.14 -2.39 -0.02 -0.64 16 7 C -0.13 0.72 6.41 31.12 0.20 0.92 16 8 C 0.11 -0.12 4.33 45.58 0.20 0.08 16 9 H 0.08 0.31 7.46 -2.39 -0.02 0.30 16 10 N -0.69 1.27 5.21 -442.77 -2.31 -1.04 16 11 C 0.56 2.66 7.77 86.75 0.67 3.33 16 12 O -0.56 -7.72 14.94 -3.92 -0.06 -7.78 16 13 C -0.15 -0.14 5.88 -20.05 -0.12 -0.26 16 14 C 0.14 0.29 7.28 22.67 0.17 0.46 16 15 F -0.12 -0.94 15.55 44.97 0.70 -0.24 16 16 C -0.12 0.42 8.62 22.27 0.19 0.61 16 17 C -0.10 0.27 5.27 -19.78 -0.10 0.17 16 18 C -0.08 0.25 2.44 71.24 0.17 0.42 16 19 O -0.55 1.29 12.88 -148.98 -1.92 -0.63 16 20 Si 0.78 -3.90 29.90 68.60 2.05 -1.85 16 21 C 0.10 -0.15 7.23 22.33 0.16 0.01 16 22 F -0.13 -0.21 16.73 44.97 0.75 0.54 16 23 C -0.08 0.30 9.52 22.57 0.21 0.52 16 24 C -0.15 0.30 7.09 31.18 0.22 0.52 16 25 H 0.06 -0.25 8.14 -2.39 -0.02 -0.27 16 26 H 0.05 -0.16 8.14 -2.39 -0.02 -0.18 16 27 H 0.06 -0.28 7.56 -2.38 -0.02 -0.30 16 28 H 0.05 -0.09 8.10 -2.38 -0.02 -0.11 16 29 H 0.05 -0.11 8.14 -2.39 -0.02 -0.13 16 30 H 0.06 -0.17 8.14 -2.39 -0.02 -0.19 16 31 H 0.06 -0.27 6.05 -2.39 -0.01 -0.28 16 32 H 0.05 -0.13 8.14 -2.38 -0.02 -0.15 16 33 H 0.06 -0.15 6.46 -2.39 -0.02 -0.17 16 34 H 0.08 -0.60 8.14 -2.39 -0.02 -0.62 16 35 H 0.10 -0.59 6.09 -2.39 -0.01 -0.61 16 36 H 0.41 -3.33 6.73 -92.70 -0.62 -3.95 16 37 H 0.18 -1.64 5.10 -2.91 -0.01 -1.66 16 38 H 0.11 -0.17 7.89 -2.39 -0.02 -0.19 16 39 H 0.40 -4.50 8.70 -74.06 -0.64 -5.14 16 40 H -0.28 -0.02 7.11 99.48 0.71 0.69 16 41 H -0.29 -0.72 7.11 99.48 0.71 -0.01 16 42 H 0.18 -1.79 6.40 -2.91 -0.02 -1.81 16 43 H 0.10 -0.18 5.69 -2.39 -0.01 -0.19 16 44 H 0.06 0.01 8.14 -2.39 -0.02 -0.01 16 Total: 0.00 -18.68 356.46 2.70 -15.98 By element: Atomic # 1 Polarization: -15.45 SS G_CDS: -0.18 Total: -15.63 kcal Atomic # 6 Polarization: 6.99 SS G_CDS: 3.66 Total: 10.65 kcal Atomic # 7 Polarization: 1.27 SS G_CDS: -2.31 Total: -1.04 kcal Atomic # 8 Polarization: -6.43 SS G_CDS: -1.98 Total: -8.41 kcal Atomic # 9 Polarization: -1.15 SS G_CDS: 1.45 Total: 0.30 kcal Atomic # 14 Polarization: -3.90 SS G_CDS: 2.05 Total: -1.85 kcal Total: -18.68 2.70 -15.98 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664192_12360598.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -88.343 kcal (2) G-P(sol) polarization free energy of solvation -18.676 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -107.020 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.699 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.978 kcal (6) G-S(sol) free energy of system = (1) + (5) -104.321 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds