Wall clock time and date at job start Sun Mar 7 2021 13:39:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.53001 * 109.47153 * 2 1 4 4 C 1.53002 * 109.47105 * 239.99400 * 2 1 3 5 5 C 1.53002 * 109.47045 * 119.99725 * 2 1 3 6 6 H 1.08999 * 112.85342 * 292.52064 * 5 2 1 7 7 C 1.53778 * 113.61573 * 63.71512 * 5 2 1 8 8 C 1.53786 * 87.17571 * 139.93796 * 7 5 2 9 9 H 1.08997 * 113.61869 * 220.06331 * 8 7 5 10 10 N 1.46499 * 113.61220 * 89.15533 * 8 7 5 11 11 C 1.34780 * 119.99716 * 155.00170 * 10 8 7 12 12 O 1.21642 * 119.99865 * 0.02562 * 11 10 8 13 13 C 1.47059 * 119.99816 * 180.02562 * 11 10 8 14 14 C 1.35864 * 125.42106 * 179.69827 * 13 11 10 15 15 C 1.41602 * 107.72266 * 179.84373 * 14 13 11 16 16 C 1.40063 * 133.37706 * 180.02562 * 15 14 13 17 17 C 1.36475 * 119.82900 * 180.33376 * 16 15 14 18 18 C 1.38897 * 120.61428 * 0.02562 * 17 16 15 19 19 C 1.50696 * 119.67784 * 179.97438 * 18 17 16 20 20 O 1.42901 * 109.47041 * 120.02318 * 19 18 17 21 21 Si 1.86301 * 109.46967 * 0.02562 * 19 18 17 22 22 C 1.37715 * 120.64789 * 0.02562 * 18 17 16 23 23 C 1.39183 * 119.80941 * 359.97438 * 22 18 17 24 24 N 1.37490 * 133.18636 * 180.02562 * 23 22 18 25 25 C 1.53786 * 113.61547 * 161.21317 * 5 2 1 26 26 H 1.09007 * 109.47036 * 300.00217 * 1 2 3 27 27 H 1.09002 * 109.47171 * 60.00425 * 1 2 3 28 28 H 1.08995 * 109.47029 * 180.02562 * 1 2 3 29 29 H 1.08999 * 109.46855 * 180.02562 * 3 2 1 30 30 H 1.09002 * 109.46735 * 299.99842 * 3 2 1 31 31 H 1.08994 * 109.47317 * 59.99691 * 3 2 1 32 32 H 1.08997 * 109.47622 * 293.49314 * 4 2 1 33 33 H 1.09002 * 109.46624 * 53.49232 * 4 2 1 34 34 H 1.09004 * 109.47019 * 173.48828 * 4 2 1 35 35 H 1.08993 * 113.61565 * 254.52885 * 7 5 2 36 36 H 1.09009 * 113.61321 * 25.35105 * 7 5 2 37 37 H 0.96997 * 120.00336 * 335.00574 * 10 8 7 38 38 H 1.07997 * 126.14078 * 359.97438 * 14 13 11 39 39 H 1.08004 * 120.09071 * 0.34668 * 16 15 14 40 40 H 1.08000 * 119.69622 * 179.97438 * 17 16 15 41 41 H 1.09002 * 109.47092 * 240.02234 * 19 18 17 42 42 H 0.96703 * 113.99911 * 180.02562 * 20 19 18 43 43 H 1.48500 * 109.99702 * 298.67935 * 21 19 18 44 44 H 1.48496 * 110.00202 * 60.00117 * 21 19 18 45 45 H 1.07999 * 120.09445 * 179.97438 * 22 18 17 46 46 H 0.96999 * 125.60574 * 359.96623 * 24 23 22 47 47 H 1.09000 * 113.60911 * 334.56946 * 25 5 2 48 48 H 1.09001 * 113.61449 * 105.38362 * 25 5 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7214 -1.2492 5 6 2.0400 -0.7212 1.2493 6 1 1.8184 -0.1813 2.1699 7 6 1.6571 -2.2096 1.3008 8 6 3.0673 -2.4750 1.8539 9 1 3.5320 -3.3750 1.4513 10 7 3.1493 -2.3953 3.3144 11 6 4.1168 -3.0643 3.9725 12 8 4.9220 -3.7339 3.3537 13 6 4.1988 -2.9847 5.4386 14 6 5.1212 -3.6159 6.2111 15 6 4.8572 -3.2781 7.5606 16 6 5.4643 -3.6223 8.7750 17 6 4.9658 -3.1310 9.9465 18 6 3.8593 -2.2914 9.9475 19 6 3.3260 -1.7614 11.2536 20 8 3.3784 -0.3334 11.2451 21 14 4.3629 -2.4126 12.6577 22 6 3.2442 -1.9392 8.7668 23 6 3.7342 -2.4274 7.5590 24 7 3.3474 -2.2602 6.2502 25 6 3.5031 -1.1823 1.1404 26 1 -0.3633 0.5139 0.8900 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3633 -1.0276 0.0005 29 1 3.1300 1.4424 -0.0005 30 1 1.6767 1.9563 -0.8900 31 1 1.6767 1.9564 0.8899 32 1 1.7749 -1.7771 -1.1928 33 1 1.5846 -0.2792 -2.1353 34 1 3.1238 -0.6216 -1.3094 35 1 0.8606 -2.4313 2.0111 36 1 1.4832 -2.6500 0.3189 37 1 2.5075 -1.8611 3.8079 38 1 5.9148 -4.2582 5.8589 39 1 6.3250 -4.2748 8.7842 40 1 5.4354 -3.3982 10.8817 41 1 2.2936 -2.0864 11.3831 42 1 3.0501 0.0770 12.0569 43 1 4.2912 -3.8954 12.6968 44 1 5.7727 -1.9764 12.4928 45 1 2.3842 -1.2861 8.7780 46 1 2.5994 -1.7225 5.9467 47 1 3.8352 -1.3420 0.1146 48 1 4.1970 -0.5736 1.7200 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664192_13158378.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 13:39:51 Heat of formation + Delta-G solvation = 11.611920 kcal Electronic energy + Delta-G solvation = -27589.888348 eV Core-core repulsion = 23805.246018 eV Total energy + Delta-G solvation = -3784.642330 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 329.178 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -42.71746 -41.56321 -39.96682 -38.81484 -37.01754 -36.63901 -33.92109 -33.26894 -31.14222 -30.44471 -28.60703 -28.34136 -27.30409 -26.38401 -25.87701 -24.29616 -23.18937 -21.96816 -21.31216 -21.23107 -19.58932 -19.21067 -18.44413 -17.96661 -17.31548 -17.02466 -16.62320 -16.41308 -16.21747 -15.89610 -15.55347 -15.31722 -15.06863 -14.99019 -14.79221 -14.70026 -14.38763 -14.32106 -14.01167 -13.94636 -13.60733 -13.38018 -13.28180 -12.90207 -12.83424 -12.67105 -12.54211 -12.26355 -12.16506 -12.14643 -11.99159 -11.84213 -11.50163 -11.24699 -11.21743 -10.99839 -10.93950 -10.34904 -10.20193 -9.33094 -8.82698 -4.96077 -0.34529 0.49081 0.99345 1.27170 1.65609 1.74514 1.89978 1.99876 2.24942 2.73047 3.35294 3.37963 3.41364 3.53061 3.59588 3.62509 3.74351 3.83939 3.93432 3.95311 4.12686 4.15594 4.18620 4.28896 4.35803 4.40825 4.43426 4.55087 4.58191 4.62858 4.65357 4.68426 4.73369 4.82576 4.86102 4.87824 4.90915 4.94727 4.98716 5.00730 5.07355 5.10830 5.25009 5.28724 5.35129 5.36684 5.37203 5.50574 5.55339 5.59536 5.94006 6.18461 6.34491 6.58310 6.99564 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.141 4.141 2 C -0.059 4.059 3 C -0.141 4.141 4 C -0.149 4.149 5 C -0.099 4.099 6 H 0.086 0.914 7 C -0.143 4.143 8 C 0.118 3.882 9 H 0.107 0.893 10 N -0.711 5.711 11 C 0.588 3.412 12 O -0.515 6.515 13 C 0.013 3.987 14 C -0.098 4.098 15 C -0.117 4.117 16 C -0.049 4.049 17 C -0.152 4.152 18 C -0.045 4.045 19 C -0.072 4.072 20 O -0.546 6.546 21 Si 0.685 3.315 22 C -0.100 4.100 23 C 0.117 3.883 24 N -0.577 5.577 25 C -0.151 4.151 26 H 0.053 0.947 27 H 0.055 0.945 28 H 0.056 0.944 29 H 0.055 0.945 30 H 0.055 0.945 31 H 0.053 0.947 32 H 0.059 0.941 33 H 0.055 0.945 34 H 0.059 0.941 35 H 0.071 0.929 36 H 0.101 0.899 37 H 0.396 0.604 38 H 0.159 0.841 39 H 0.132 0.868 40 H 0.121 0.879 41 H 0.075 0.925 42 H 0.383 0.617 43 H -0.254 1.254 44 H -0.250 1.250 45 H 0.129 0.871 46 H 0.417 0.583 47 H 0.100 0.900 48 H 0.070 0.930 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.010 2.615 2.533 6.193 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.199 4.199 2 C -0.059 4.059 3 C -0.199 4.199 4 C -0.205 4.205 5 C -0.118 4.118 6 H 0.104 0.896 7 C -0.181 4.181 8 C 0.014 3.986 9 H 0.125 0.875 10 N -0.361 5.361 11 C 0.375 3.625 12 O -0.390 6.390 13 C -0.096 4.096 14 C -0.125 4.125 15 C -0.122 4.122 16 C -0.067 4.067 17 C -0.170 4.170 18 C -0.046 4.046 19 C -0.182 4.182 20 O -0.352 6.352 21 Si 0.586 3.414 22 C -0.120 4.120 23 C 0.007 3.993 24 N -0.182 5.182 25 C -0.189 4.189 26 H 0.072 0.928 27 H 0.074 0.926 28 H 0.075 0.925 29 H 0.074 0.926 30 H 0.074 0.926 31 H 0.072 0.928 32 H 0.078 0.922 33 H 0.074 0.926 34 H 0.078 0.922 35 H 0.090 0.910 36 H 0.120 0.880 37 H 0.230 0.770 38 H 0.177 0.823 39 H 0.150 0.850 40 H 0.138 0.862 41 H 0.093 0.907 42 H 0.230 0.770 43 H -0.179 1.179 44 H -0.174 1.174 45 H 0.147 0.853 46 H 0.255 0.745 47 H 0.118 0.882 48 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges -3.588 1.569 1.566 4.218 hybrid contribution -0.978 0.607 -0.426 1.227 sum -4.566 2.176 1.140 5.185 Atomic orbital electron populations 1.21852 0.94403 1.01835 1.01770 1.20428 0.95542 0.95405 0.94541 1.21850 1.01107 0.95172 1.01748 1.22042 1.01233 1.00420 0.96849 1.22647 0.95995 0.94918 0.98211 0.89598 1.23462 0.95843 0.96498 1.02296 1.21933 0.97909 0.99907 0.78900 0.87539 1.45552 1.32308 1.50769 1.07489 1.17164 0.81182 0.79442 0.84759 1.90880 1.40274 1.40553 1.67251 1.20081 0.96778 1.02357 0.90340 1.20971 0.99751 1.01383 0.90404 1.18196 0.97969 1.02219 0.93813 1.20323 0.98595 0.97881 0.89918 1.20341 0.97588 1.01272 0.97838 1.19024 0.95303 0.97129 0.93179 1.24701 1.05769 0.85806 1.01919 1.86495 1.88155 1.16978 1.43600 0.95431 0.80403 0.80736 0.84838 1.19824 1.01893 1.01894 0.88431 1.18277 0.96625 0.99685 0.84680 1.41871 1.28457 1.43453 1.04458 1.23639 0.96615 0.96759 1.01877 0.92800 0.92591 0.92541 0.92582 0.92586 0.92804 0.92237 0.92553 0.92175 0.91002 0.88033 0.77029 0.82320 0.85005 0.86202 0.90677 0.76978 1.17897 1.17423 0.85341 0.74473 0.88186 0.91166 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 0.23 8.31 37.16 0.31 0.54 16 2 C -0.06 0.10 0.68 -154.51 -0.11 -0.01 16 3 C -0.14 0.17 8.43 37.16 0.31 0.48 16 4 C -0.15 0.23 7.48 37.16 0.28 0.51 16 5 C -0.10 0.20 2.92 -89.81 -0.26 -0.06 16 6 H 0.09 -0.20 8.14 -51.93 -0.42 -0.62 16 7 C -0.14 0.31 6.40 -25.92 -0.17 0.14 16 8 C 0.12 -0.05 4.33 -67.02 -0.29 -0.34 16 9 H 0.11 0.14 7.46 -51.93 -0.39 -0.25 16 10 N -0.71 0.34 5.26 -54.12 -0.28 0.06 16 11 C 0.59 1.57 7.80 -12.68 -0.10 1.47 16 12 O -0.51 -3.24 16.44 5.24 0.09 -3.15 16 13 C 0.01 0.03 6.96 -82.29 -0.57 -0.54 16 14 C -0.10 -0.30 10.53 -39.15 -0.41 -0.71 16 15 C -0.12 -0.38 6.16 -106.93 -0.66 -1.03 16 16 C -0.05 -0.12 10.06 -39.53 -0.40 -0.52 16 17 C -0.15 -0.41 8.59 -39.97 -0.34 -0.75 16 18 C -0.04 -0.10 5.43 -104.57 -0.57 -0.67 16 19 C -0.07 0.02 2.80 36.00 0.10 0.12 16 20 O -0.55 0.08 12.73 -35.23 -0.45 -0.37 16 21 Si 0.68 -0.77 29.75 -169.99 -5.06 -5.83 16 22 C -0.10 -0.19 9.61 -39.42 -0.38 -0.57 16 23 C 0.12 0.27 7.25 -83.98 -0.61 -0.34 16 24 N -0.58 -0.14 6.07 -7.36 -0.04 -0.18 16 25 C -0.15 0.14 7.09 -25.82 -0.18 -0.04 16 26 H 0.05 -0.08 8.14 -51.92 -0.42 -0.51 16 27 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 28 H 0.06 -0.10 7.56 -51.93 -0.39 -0.49 16 29 H 0.06 -0.05 8.10 -51.93 -0.42 -0.47 16 30 H 0.06 -0.05 8.14 -51.93 -0.42 -0.48 16 31 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 32 H 0.06 -0.11 6.05 -51.93 -0.31 -0.42 16 33 H 0.06 -0.07 8.14 -51.93 -0.42 -0.49 16 34 H 0.06 -0.09 6.46 -51.93 -0.34 -0.42 16 35 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 36 H 0.10 -0.23 6.09 -51.92 -0.32 -0.55 16 37 H 0.40 -1.21 7.76 -40.82 -0.32 -1.52 16 38 H 0.16 0.36 8.06 -52.49 -0.42 -0.06 16 39 H 0.13 0.06 8.06 -52.48 -0.42 -0.36 16 40 H 0.12 0.23 4.82 -52.49 -0.25 -0.02 16 41 H 0.08 -0.15 7.96 -51.93 -0.41 -0.57 16 42 H 0.38 -1.99 8.74 45.56 0.40 -1.59 16 43 H -0.25 -0.33 7.11 56.52 0.40 0.07 16 44 H -0.25 -0.55 7.11 56.52 0.40 -0.15 16 45 H 0.13 0.04 8.06 -52.49 -0.42 -0.38 16 46 H 0.42 -1.26 8.12 -40.82 -0.33 -1.59 16 47 H 0.10 -0.11 5.69 -51.93 -0.30 -0.40 16 48 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 LS Contribution 379.45 15.07 5.72 5.72 Total: 0.00 -8.04 379.45 -11.30 -19.35 By element: Atomic # 1 Polarization: -6.03 SS G_CDS: -7.23 Total: -13.26 kcal Atomic # 6 Polarization: 1.71 SS G_CDS: -4.05 Total: -2.33 kcal Atomic # 7 Polarization: 0.21 SS G_CDS: -0.33 Total: -0.12 kcal Atomic # 8 Polarization: -3.16 SS G_CDS: -0.36 Total: -3.52 kcal Atomic # 14 Polarization: -0.77 SS G_CDS: -5.06 Total: -5.83 kcal Total LS contribution 5.72 Total: 5.72 kcal Total: -8.04 -11.30 -19.35 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664192_13158378.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 30.960 kcal (2) G-P(sol) polarization free energy of solvation -8.045 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 22.915 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.303 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.348 kcal (6) G-S(sol) free energy of system = (1) + (5) 11.612 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds