Wall clock time and date at job start Sun Mar 7 2021 13:40:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.52992 * 109.47121 * 2 1 4 4 C 1.53001 * 109.47139 * 239.99491 * 2 1 3 5 5 C 1.53002 * 109.46847 * 119.99797 * 2 1 3 6 6 H 1.09000 * 112.90647 * 186.26890 * 5 2 1 7 7 C 1.53781 * 113.61761 * 317.52229 * 5 2 1 8 8 C 1.53776 * 87.08099 * 139.98213 * 7 5 2 9 9 H 1.09004 * 113.61542 * 220.01874 * 8 7 5 10 10 N 1.46501 * 113.61745 * 89.12146 * 8 7 5 11 11 C 1.34775 * 120.00290 * 107.49805 * 10 8 7 12 12 O 1.21583 * 119.99841 * 0.02562 * 11 10 8 13 13 C 1.47568 * 119.99733 * 180.02562 * 11 10 8 14 14 C 1.40213 * 120.11833 * 180.02562 * 13 11 10 15 15 O 1.35645 * 120.00323 * 359.97438 * 14 13 11 16 16 C 1.38810 * 119.99284 * 180.02562 * 14 13 11 17 17 C 1.37771 * 120.24885 * 359.97438 * 16 14 13 18 18 C 1.39841 * 120.24016 * 0.02602 * 17 16 14 19 19 C 1.47826 * 119.99766 * 180.02562 * 18 17 16 20 20 C 1.35932 * 125.93004 * 359.71173 * 19 18 17 21 21 C 1.40968 * 106.74250 * 179.91456 * 20 19 18 22 22 C 1.34707 * 107.02547 * 0.35123 * 21 20 19 23 23 C 1.50698 * 125.66201 * 179.78564 * 22 21 20 24 24 O 1.42900 * 109.47262 * 64.97394 * 23 22 21 25 25 Si 1.86298 * 109.47274 * 184.97687 * 23 22 21 26 26 O 1.34337 * 108.67148 * 359.78254 * 22 21 20 27 27 C 1.39178 * 120.00330 * 359.67641 * 18 17 16 28 28 C 1.53780 * 87.08390 * 334.56574 * 8 7 5 29 29 H 1.09004 * 109.47155 * 306.30420 * 1 2 3 30 30 H 1.09004 * 109.47137 * 66.30397 * 1 2 3 31 31 H 1.09005 * 109.47105 * 186.30113 * 1 2 3 32 32 H 1.09005 * 109.47197 * 179.97438 * 3 2 1 33 33 H 1.09004 * 109.47494 * 299.99552 * 3 2 1 34 34 H 1.09004 * 109.47561 * 60.00021 * 3 2 1 35 35 H 1.08999 * 109.47168 * 300.00096 * 4 2 1 36 36 H 1.08999 * 109.47067 * 60.00351 * 4 2 1 37 37 H 1.09005 * 109.46871 * 180.02562 * 4 2 1 38 38 H 1.08998 * 113.61574 * 254.53596 * 7 5 2 39 39 H 1.09007 * 113.61098 * 25.34785 * 7 5 2 40 40 H 0.97000 * 119.99465 * 287.50214 * 10 8 7 41 41 H 0.96703 * 114.00042 * 90.00368 * 15 14 13 42 42 H 1.08005 * 119.87883 * 179.97438 * 16 14 13 43 43 H 1.07997 * 119.88095 * 180.02562 * 17 16 14 44 44 H 1.08007 * 126.62935 * 0.02562 * 20 19 18 45 45 H 1.07996 * 126.48460 * 180.13468 * 21 20 19 46 46 H 1.09002 * 109.46972 * 304.97298 * 23 22 21 47 47 H 0.96699 * 114.00159 * 60.00251 * 24 23 22 48 48 H 1.48503 * 110.00135 * 179.97438 * 25 23 22 49 49 H 1.48505 * 109.99733 * 301.31723 * 25 23 22 50 50 H 1.07998 * 120.12339 * 180.31647 * 27 18 17 51 51 H 1.09000 * 113.61848 * 270.88368 * 28 8 7 52 52 H 1.09001 * 113.61227 * 139.97841 * 28 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 6 2.0400 -0.7214 -1.2492 5 6 2.0399 -0.7212 1.2493 6 1 3.1223 -0.6600 1.3625 7 6 1.2655 -0.3608 2.5280 8 6 1.3630 -1.8467 2.9118 9 1 0.4531 -2.2415 3.3640 10 7 2.5689 -2.1779 3.6748 11 6 2.4788 -2.4562 4.9904 12 8 1.3965 -2.4329 5.5439 13 6 3.6936 -2.7893 5.7591 14 6 3.6027 -3.0798 7.1277 15 8 2.3965 -3.0545 7.7478 16 6 4.7472 -3.3922 7.8484 17 6 5.9749 -3.4188 7.2238 18 6 6.0773 -3.1308 5.8592 19 6 7.3972 -3.1615 5.1943 20 6 8.5845 -3.4477 5.7911 21 6 9.5731 -3.3638 4.7897 22 6 8.9476 -3.0264 3.6453 23 6 9.6123 -2.8196 2.3088 24 8 10.1699 -4.0556 1.8577 25 14 8.3522 -2.2197 1.0747 26 8 7.6329 -2.9049 3.8934 27 6 4.9355 -2.8223 5.1255 28 6 1.4836 -2.1461 1.4082 29 1 -0.3634 0.6085 0.8282 30 1 -0.3633 0.4130 -0.9411 31 1 -0.3633 -1.0215 0.1128 32 1 3.1300 1.4424 0.0005 33 1 1.6767 1.9563 -0.8900 34 1 1.6767 1.9563 0.8900 35 1 1.6767 -1.7490 -1.2491 36 1 1.6767 -0.2076 -2.1392 37 1 3.1301 -0.7217 -1.2489 38 1 1.8139 0.3004 3.1989 39 1 0.2463 -0.0228 2.3405 40 1 3.4323 -2.1968 3.2331 41 1 1.9316 -3.9024 7.7385 42 1 4.6751 -3.6153 8.9027 43 1 6.8615 -3.6631 7.7901 44 1 8.7401 -3.6937 6.8312 45 1 10.6319 -3.5340 4.9167 46 1 10.4050 -2.0781 2.4081 47 1 9.5200 -4.7630 1.7467 48 1 8.9953 -2.0113 -0.2475 49 1 7.2497 -3.2073 0.9537 50 1 5.0117 -2.6045 4.0704 51 1 0.5236 -2.2976 0.9147 52 1 2.2083 -2.9262 1.1752 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664192_13259648.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 13:40:00 Heat of formation + Delta-G solvation = -42.939068 kcal Electronic energy + Delta-G solvation = -34254.394754 eV Core-core repulsion = 29767.222302 eV Total energy + Delta-G solvation = -4487.172452 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.182 amu Computer time = 1.46 seconds Orbital eigenvalues (eV) -43.74902 -41.82105 -40.94360 -39.28524 -38.25394 -37.83870 -36.46762 -34.35789 -33.87247 -32.77128 -32.07668 -30.09556 -28.53406 -28.28103 -26.46242 -26.39612 -26.28737 -25.01710 -23.61371 -22.98325 -21.98878 -21.23714 -21.15578 -19.64107 -19.22117 -19.07549 -18.39635 -17.68655 -17.50989 -17.11386 -16.81084 -16.52994 -16.46103 -16.19387 -15.88065 -15.81660 -15.63478 -15.41388 -15.09825 -14.75957 -14.54931 -14.36659 -14.19501 -14.02189 -13.88245 -13.84140 -13.66301 -13.47420 -13.30512 -13.19190 -13.15716 -12.93899 -12.79536 -12.75507 -12.47875 -12.12111 -12.09034 -11.91201 -11.83908 -11.38807 -11.15910 -11.10759 -10.90555 -10.85853 -10.76443 -10.49854 -10.33429 -9.98398 -8.95049 -5.07820 -0.59265 -0.25263 0.73070 1.04830 1.39980 1.45443 1.63617 1.84944 1.92440 2.03578 2.60829 3.06403 3.09599 3.23225 3.43236 3.48213 3.50432 3.56894 3.69570 3.82123 3.84377 3.93282 3.96705 4.00824 4.12017 4.20885 4.22560 4.26829 4.34456 4.49144 4.55726 4.58027 4.64655 4.70606 4.71613 4.72637 4.74976 4.78224 4.83028 4.89258 4.94571 4.96985 4.98246 5.07030 5.07347 5.09212 5.11875 5.14437 5.21187 5.33536 5.36821 5.40863 5.42954 5.43347 5.65871 5.92660 6.18058 6.45455 6.64871 7.21846 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.059 4.059 3 C -0.141 4.141 4 C -0.142 4.142 5 C -0.100 4.100 6 H 0.088 0.912 7 C -0.150 4.150 8 C 0.120 3.880 9 H 0.103 0.897 10 N -0.710 5.710 11 C 0.562 3.438 12 O -0.515 6.515 13 C -0.164 4.164 14 C 0.180 3.820 15 O -0.475 6.475 16 C -0.148 4.148 17 C -0.053 4.053 18 C -0.034 4.034 19 C 0.036 3.964 20 C -0.188 4.188 21 C -0.169 4.169 22 C -0.050 4.050 23 C -0.034 4.034 24 O -0.520 6.520 25 Si 0.696 3.304 26 O -0.166 6.166 27 C -0.054 4.054 28 C -0.145 4.145 29 H 0.059 0.941 30 H 0.055 0.945 31 H 0.058 0.942 32 H 0.054 0.946 33 H 0.054 0.946 34 H 0.055 0.945 35 H 0.055 0.945 36 H 0.054 0.946 37 H 0.053 0.947 38 H 0.070 0.930 39 H 0.098 0.902 40 H 0.399 0.601 41 H 0.400 0.600 42 H 0.146 0.854 43 H 0.140 0.860 44 H 0.155 0.845 45 H 0.154 0.846 46 H 0.137 0.863 47 H 0.380 0.620 48 H -0.248 1.248 49 H -0.254 1.254 50 H 0.135 0.865 51 H 0.100 0.900 52 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.993 -0.307 -1.160 2.327 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.059 4.059 3 C -0.199 4.199 4 C -0.199 4.199 5 C -0.118 4.118 6 H 0.106 0.894 7 C -0.189 4.189 8 C 0.015 3.985 9 H 0.121 0.879 10 N -0.363 5.363 11 C 0.350 3.650 12 O -0.391 6.391 13 C -0.167 4.167 14 C 0.133 3.867 15 O -0.287 6.287 16 C -0.167 4.167 17 C -0.071 4.071 18 C -0.034 4.034 19 C -0.014 4.014 20 C -0.207 4.207 21 C -0.188 4.188 22 C -0.100 4.100 23 C -0.144 4.144 24 O -0.327 6.327 25 Si 0.595 3.405 26 O -0.063 6.063 27 C -0.073 4.073 28 C -0.183 4.183 29 H 0.078 0.922 30 H 0.074 0.926 31 H 0.077 0.923 32 H 0.073 0.927 33 H 0.073 0.927 34 H 0.074 0.926 35 H 0.074 0.926 36 H 0.073 0.927 37 H 0.073 0.927 38 H 0.089 0.911 39 H 0.116 0.884 40 H 0.234 0.766 41 H 0.259 0.741 42 H 0.164 0.836 43 H 0.158 0.842 44 H 0.172 0.828 45 H 0.172 0.828 46 H 0.155 0.845 47 H 0.229 0.771 48 H -0.172 1.172 49 H -0.178 1.178 50 H 0.152 0.848 51 H 0.118 0.882 52 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges 1.228 0.545 -1.622 2.106 hybrid contribution 0.773 -1.688 -0.008 1.856 sum 2.001 -1.143 -1.630 2.823 Atomic orbital electron populations 1.22045 0.94616 1.02009 1.01883 1.20420 0.95589 0.95392 0.94477 1.21849 1.00938 0.95261 1.01828 1.21854 1.00935 1.00271 0.96832 1.22656 0.99528 0.95215 0.94394 0.89396 1.23592 1.01976 0.96446 0.96872 1.21832 0.88742 0.96359 0.91563 0.87865 1.45602 1.10517 1.71161 1.08982 1.17967 0.88395 0.77037 0.81649 1.90835 1.28353 1.50744 1.69136 1.20283 0.93753 1.08492 0.94201 1.18597 0.86500 0.93308 0.88255 1.84751 1.29100 1.38073 1.76747 1.21400 0.91392 1.02451 1.01440 1.21125 0.98126 0.95519 0.92327 1.17573 0.88431 1.04406 0.93031 1.20274 0.94168 1.05512 0.81449 1.21863 0.91091 1.06658 1.01113 1.21572 1.01091 1.04613 0.91503 1.22836 0.80682 1.07718 0.98756 1.24337 1.05186 0.90753 0.94087 1.86670 1.37599 1.21092 1.87332 0.94549 0.77705 0.89735 0.78489 1.83920 1.26234 1.69510 1.26681 1.21289 0.90446 0.95769 0.99759 1.23475 1.02780 0.97301 0.94722 0.92186 0.92633 0.92268 0.92684 0.92673 0.92566 0.92610 0.92654 0.92743 0.91146 0.88402 0.76583 0.74140 0.83621 0.84208 0.82783 0.82794 0.84518 0.77145 1.17207 1.17827 0.84761 0.88179 0.91057 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.20 7.53 37.16 0.28 0.48 16 2 C -0.06 0.09 0.68 -154.51 -0.10 -0.02 16 3 C -0.14 0.16 8.42 37.15 0.31 0.47 16 4 C -0.14 0.20 8.33 37.16 0.31 0.50 16 5 C -0.10 0.17 2.91 -89.80 -0.26 -0.09 16 6 H 0.09 -0.17 8.14 -51.93 -0.42 -0.60 16 7 C -0.15 0.09 7.04 -25.92 -0.18 -0.10 16 8 C 0.12 0.00 4.32 -67.12 -0.29 -0.29 16 9 H 0.10 0.17 7.47 -51.93 -0.39 -0.21 16 10 N -0.71 -0.06 5.21 -54.05 -0.28 -0.34 16 11 C 0.56 1.52 7.76 -12.46 -0.10 1.43 16 12 O -0.52 -3.14 14.74 -16.66 -0.25 -3.38 16 13 C -0.16 -0.22 5.88 -104.90 -0.62 -0.83 16 14 C 0.18 0.22 6.72 -38.63 -0.26 -0.03 16 15 O -0.48 -0.97 11.55 -40.59 -0.47 -1.44 16 16 C -0.15 0.12 9.96 -39.54 -0.39 -0.28 16 17 C -0.05 0.07 9.54 -39.15 -0.37 -0.31 16 18 C -0.03 0.00 5.87 -105.03 -0.62 -0.61 16 19 C 0.04 0.01 7.03 -36.49 -0.26 -0.24 16 20 C -0.19 0.03 10.26 -39.38 -0.40 -0.38 16 21 C -0.17 -0.03 10.78 -39.80 -0.43 -0.46 16 22 C -0.05 0.00 6.20 -35.56 -0.22 -0.22 16 23 C -0.03 0.04 2.98 36.00 0.11 0.15 16 24 O -0.52 -0.01 12.88 -35.23 -0.45 -0.46 16 25 Si 0.70 -1.15 32.11 -169.99 -5.46 -6.61 16 26 O -0.17 -0.08 8.80 4.60 0.04 -0.04 16 27 C -0.05 0.01 9.20 -38.78 -0.36 -0.35 16 28 C -0.14 0.24 6.46 -25.92 -0.17 0.07 16 29 H 0.06 -0.07 6.43 -51.93 -0.33 -0.41 16 30 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 31 H 0.06 -0.09 6.00 -51.93 -0.31 -0.40 16 32 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 33 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 34 H 0.06 -0.04 8.05 -51.93 -0.42 -0.46 16 35 H 0.05 -0.08 7.61 -51.93 -0.39 -0.47 16 36 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 37 H 0.05 -0.08 8.14 -51.93 -0.42 -0.50 16 38 H 0.07 0.04 8.14 -51.93 -0.42 -0.39 16 39 H 0.10 -0.07 5.72 -51.92 -0.30 -0.37 16 40 H 0.40 -0.80 6.73 -40.82 -0.27 -1.07 16 41 H 0.40 -0.69 9.06 45.56 0.41 -0.27 16 42 H 0.15 -0.38 8.06 -52.48 -0.42 -0.80 16 43 H 0.14 -0.49 6.96 -52.49 -0.37 -0.85 16 44 H 0.15 -0.35 7.25 -52.48 -0.38 -0.73 16 45 H 0.15 -0.13 8.06 -52.49 -0.42 -0.56 16 46 H 0.14 -0.35 7.96 -51.93 -0.41 -0.76 16 47 H 0.38 -1.02 8.70 45.56 0.40 -0.62 16 48 H -0.25 -0.25 7.11 56.52 0.40 0.15 16 49 H -0.25 -0.14 7.11 56.52 0.40 0.26 16 50 H 0.13 -0.26 6.24 -52.49 -0.33 -0.58 16 51 H 0.10 -0.19 6.02 -51.93 -0.31 -0.50 16 52 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 LS Contribution 418.80 15.07 6.31 6.31 Total: 0.00 -8.29 418.80 -11.41 -19.70 By element: Atomic # 1 Polarization: -5.79 SS G_CDS: -6.83 Total: -12.63 kcal Atomic # 6 Polarization: 2.92 SS G_CDS: -4.02 Total: -1.10 kcal Atomic # 7 Polarization: -0.06 SS G_CDS: -0.28 Total: -0.34 kcal Atomic # 8 Polarization: -4.20 SS G_CDS: -1.13 Total: -5.33 kcal Atomic # 14 Polarization: -1.15 SS G_CDS: -5.46 Total: -6.61 kcal Total LS contribution 6.31 Total: 6.31 kcal Total: -8.29 -11.41 -19.70 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664192_13259648.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.241 kcal (2) G-P(sol) polarization free energy of solvation -8.290 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -31.531 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.408 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.698 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.939 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.46 seconds