Wall clock time and date at job start Sun Mar 7 2021 13:40:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.53000 * 109.46982 * 2 1 4 4 C 1.53004 * 109.47023 * 240.00334 * 2 1 3 5 5 C 1.52992 * 109.47480 * 120.00345 * 2 1 3 6 6 H 1.09008 * 112.85110 * 292.52395 * 5 2 1 7 7 C 1.53788 * 113.61675 * 63.71659 * 5 2 1 8 8 C 1.53780 * 87.08087 * 139.98462 * 7 5 2 9 9 H 1.08999 * 113.61252 * 219.93711 * 8 7 5 10 10 N 1.46498 * 113.61820 * 89.11741 * 8 7 5 11 11 C 1.34773 * 120.00270 * 154.99884 * 10 8 7 12 12 O 1.21513 * 119.99705 * 0.02562 * 11 10 8 13 13 C 1.48164 * 120.00171 * 180.02562 * 11 10 8 14 14 N 1.32718 * 119.72438 * 359.97180 * 13 11 10 15 15 C 1.31524 * 121.64367 * 180.02562 * 14 13 11 16 16 C 1.38558 * 120.90380 * 359.97438 * 15 14 13 17 17 C 1.50703 * 120.32223 * 179.97438 * 16 15 14 18 18 O 1.42901 * 109.46840 * 245.02592 * 17 16 15 19 19 Si 1.86302 * 109.47005 * 5.02656 * 17 16 15 20 20 C 1.38628 * 119.35194 * 0.02562 * 16 15 14 21 21 C 1.38591 * 118.48906 * 359.97438 * 20 16 15 22 22 C 1.53783 * 87.08362 * 334.56925 * 8 7 5 23 23 H 1.09004 * 109.47285 * 299.99328 * 1 2 3 24 24 H 1.08994 * 109.47807 * 59.99600 * 1 2 3 25 25 H 1.09002 * 109.47105 * 180.02562 * 1 2 3 26 26 H 1.08998 * 109.47018 * 180.02562 * 3 2 1 27 27 H 1.09006 * 109.47343 * 300.00393 * 3 2 1 28 28 H 1.09004 * 109.47086 * 60.00270 * 3 2 1 29 29 H 1.08994 * 109.46754 * 293.49279 * 4 2 1 30 30 H 1.09007 * 109.46935 * 53.48986 * 4 2 1 31 31 H 1.08995 * 109.47337 * 173.49192 * 4 2 1 32 32 H 1.08996 * 113.61158 * 25.43335 * 7 5 2 33 33 H 1.08999 * 113.61494 * 254.53337 * 7 5 2 34 34 H 0.97004 * 119.99582 * 335.00580 * 10 8 7 35 35 H 1.08001 * 119.54753 * 180.02562 * 15 14 13 36 36 H 1.09001 * 109.46954 * 125.02712 * 17 16 15 37 37 H 0.96696 * 113.99885 * 60.00184 * 18 17 16 38 38 H 1.48497 * 109.99813 * 180.02562 * 19 17 16 39 39 H 1.48507 * 109.99906 * 301.31461 * 19 17 16 40 40 H 1.07993 * 120.75373 * 179.97438 * 20 16 15 41 41 H 1.07992 * 120.46967 * 179.73055 * 21 20 16 42 42 H 1.08994 * 113.61675 * 139.98145 * 22 8 7 43 43 H 1.08997 * 113.61576 * 270.89150 * 22 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2493 5 6 2.0401 -0.7213 1.2491 6 1 1.8184 -0.1814 2.1698 7 6 1.6572 -2.2098 1.3005 8 6 3.0675 -2.4725 1.8545 9 1 3.5330 -3.3732 1.4543 10 7 3.1490 -2.3909 3.3149 11 6 4.1170 -3.0577 3.9742 12 8 4.9225 -3.7263 3.3572 13 6 4.1991 -2.9755 5.4513 14 7 3.3168 -2.2432 6.1197 15 6 3.3548 -2.1433 7.4306 16 6 4.3245 -2.8046 8.1668 17 6 4.3562 -2.6805 9.6684 18 8 5.5552 -2.0123 10.0659 19 14 2.8795 -1.6999 10.2417 20 6 5.2660 -3.5806 7.5086 21 6 5.2017 -3.6676 6.1270 22 6 3.5031 -1.1822 1.1401 23 1 -0.3634 0.5137 0.8901 24 1 -0.3634 0.5138 -0.8899 25 1 -0.3633 -1.0277 0.0005 26 1 3.1299 1.4425 -0.0005 27 1 1.6766 1.9564 -0.8900 28 1 1.6766 1.9563 0.8900 29 1 1.7748 -1.7769 -1.1930 30 1 1.5846 -0.2789 -2.1355 31 1 3.1237 -0.6215 -1.3095 32 1 1.4847 -2.6504 0.3186 33 1 0.8608 -2.4316 2.0108 34 1 2.5061 -1.8569 3.8074 35 1 2.6195 -1.5382 7.9401 36 1 4.3286 -3.6741 10.1158 37 1 5.6469 -1.1204 9.7039 38 1 2.8994 -1.5699 11.7209 39 1 2.8886 -0.3541 9.6139 40 1 6.0320 -4.1055 8.0600 41 1 5.9215 -4.2596 5.5815 42 1 4.1968 -0.5745 1.7210 43 1 3.8352 -1.3419 0.1143 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664192_13287726.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 13:40:07 Heat of formation + Delta-G solvation = -12.129865 kcal Electronic energy + Delta-G solvation = -23185.816496 eV Core-core repulsion = 19812.134545 eV Total energy + Delta-G solvation = -3373.681951 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 291.162 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -41.98199 -41.26243 -39.70508 -38.08093 -36.53931 -34.27360 -33.25685 -32.88873 -28.52381 -28.28976 -28.03640 -26.28584 -25.92441 -25.06665 -23.87972 -22.06610 -21.13613 -19.29390 -19.10384 -18.71963 -17.76129 -16.94145 -16.70777 -16.55451 -16.38963 -16.12978 -15.95298 -15.73768 -15.21916 -15.07507 -14.48907 -14.45252 -14.43691 -14.16013 -13.85046 -13.58226 -13.45138 -13.20798 -12.79456 -12.75138 -12.72884 -12.46641 -12.16601 -12.06279 -11.90117 -11.42667 -11.23450 -11.14013 -11.11575 -10.89767 -10.80152 -10.64302 -10.36586 -9.97777 -5.12252 -0.59119 0.03643 1.06793 1.42588 1.62546 1.81816 1.99340 2.67775 2.92493 3.15576 3.39996 3.50487 3.52853 3.61499 3.68726 3.73983 3.84936 3.89289 4.02602 4.11473 4.23631 4.24235 4.32310 4.51315 4.51712 4.67022 4.70306 4.73288 4.76456 4.78269 4.88094 4.91040 4.94226 4.96316 4.99743 5.08664 5.11615 5.15902 5.22131 5.33189 5.35278 5.44512 5.44717 5.66180 6.18548 6.33972 6.63234 7.15877 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.141 4.141 2 C -0.059 4.059 3 C -0.141 4.141 4 C -0.148 4.148 5 C -0.099 4.099 6 H 0.089 0.911 7 C -0.143 4.143 8 C 0.116 3.884 9 H 0.104 0.896 10 N -0.692 5.692 11 C 0.575 3.425 12 O -0.528 6.528 13 C 0.082 3.918 14 N -0.453 5.453 15 C 0.102 3.898 16 C -0.148 4.148 17 C -0.074 4.074 18 O -0.525 6.525 19 Si 0.686 3.314 20 C -0.052 4.052 21 C -0.108 4.108 22 C -0.151 4.151 23 H 0.054 0.946 24 H 0.054 0.946 25 H 0.056 0.944 26 H 0.055 0.945 27 H 0.054 0.946 28 H 0.053 0.947 29 H 0.059 0.941 30 H 0.055 0.945 31 H 0.059 0.941 32 H 0.100 0.900 33 H 0.073 0.927 34 H 0.412 0.588 35 H 0.164 0.836 36 H 0.125 0.875 37 H 0.378 0.622 38 H -0.251 1.251 39 H -0.255 1.255 40 H 0.148 0.852 41 H 0.153 0.847 42 H 0.069 0.931 43 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.495 0.806 0.792 3.673 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.199 4.199 2 C -0.059 4.059 3 C -0.199 4.199 4 C -0.205 4.205 5 C -0.117 4.117 6 H 0.107 0.893 7 C -0.181 4.181 8 C 0.011 3.989 9 H 0.122 0.878 10 N -0.343 5.343 11 C 0.359 3.641 12 O -0.403 6.403 13 C -0.057 4.057 14 N -0.164 5.164 15 C -0.058 4.058 16 C -0.151 4.151 17 C -0.184 4.184 18 O -0.332 6.332 19 Si 0.587 3.413 20 C -0.078 4.078 21 C -0.129 4.129 22 C -0.189 4.189 23 H 0.073 0.927 24 H 0.073 0.927 25 H 0.075 0.925 26 H 0.074 0.926 27 H 0.073 0.927 28 H 0.072 0.928 29 H 0.078 0.922 30 H 0.074 0.926 31 H 0.078 0.922 32 H 0.118 0.882 33 H 0.092 0.908 34 H 0.248 0.752 35 H 0.181 0.819 36 H 0.143 0.857 37 H 0.226 0.774 38 H -0.176 1.176 39 H -0.180 1.180 40 H 0.165 0.835 41 H 0.170 0.830 42 H 0.087 0.913 43 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges -3.744 0.917 0.554 3.894 hybrid contribution 1.334 0.518 0.548 1.532 sum -2.410 1.436 1.101 3.013 Atomic orbital electron populations 1.21850 0.94415 1.01854 1.01733 1.20426 0.95549 0.95362 0.94581 1.21851 1.01059 0.95248 1.01708 1.22040 1.01177 1.00447 0.96861 1.22651 0.95856 0.94986 0.98231 0.89323 1.23450 0.95987 0.96493 1.02148 1.21911 0.97925 0.99695 0.79395 0.87835 1.45499 1.31963 1.49884 1.06924 1.17843 0.81243 0.79421 0.85568 1.90817 1.40650 1.40975 1.67871 1.21175 0.93804 0.96461 0.94224 1.67532 1.23635 1.15639 1.09602 1.22677 0.96737 0.97063 0.89308 1.21582 0.97034 0.98516 0.97961 1.25017 0.97407 1.04562 0.91421 1.86641 1.39317 1.32859 1.74362 0.94980 0.83236 0.81693 0.81413 1.21568 0.97213 0.95426 0.93617 1.22230 0.98008 0.97965 0.94651 1.23600 0.96728 0.96886 1.01680 0.92724 0.92694 0.92518 0.92638 0.92676 0.92755 0.92232 0.92637 0.92234 0.88197 0.90799 0.75175 0.81897 0.85721 0.77433 1.17567 1.17968 0.83457 0.82954 0.91259 0.88332 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 0.16 8.32 37.16 0.31 0.47 16 2 C -0.06 0.07 0.68 -154.51 -0.11 -0.04 16 3 C -0.14 0.10 8.43 37.16 0.31 0.42 16 4 C -0.15 0.18 7.49 37.16 0.28 0.46 16 5 C -0.10 0.13 2.91 -89.81 -0.26 -0.14 16 6 H 0.09 -0.10 8.14 -51.92 -0.42 -0.52 16 7 C -0.14 0.20 6.40 -25.92 -0.17 0.03 16 8 C 0.12 0.03 4.32 -67.12 -0.29 -0.26 16 9 H 0.10 0.18 7.46 -51.93 -0.39 -0.21 16 10 N -0.69 -0.61 5.25 -53.86 -0.28 -0.89 16 11 C 0.57 1.79 7.81 -12.19 -0.10 1.69 16 12 O -0.53 -3.19 15.92 5.35 0.09 -3.10 16 13 C 0.08 0.15 6.75 -83.01 -0.56 -0.41 16 14 N -0.45 -0.41 9.54 -9.80 -0.09 -0.51 16 15 C 0.10 -0.08 9.84 -17.57 -0.17 -0.25 16 16 C -0.15 0.18 5.37 -104.36 -0.56 -0.38 16 17 C -0.07 0.15 2.82 36.01 0.10 0.25 16 18 O -0.53 0.22 12.84 -35.23 -0.45 -0.23 16 19 Si 0.69 -1.82 29.91 -169.99 -5.08 -6.91 16 20 C -0.05 0.03 9.83 -39.31 -0.39 -0.35 16 21 C -0.11 -0.09 9.63 -39.05 -0.38 -0.47 16 22 C -0.15 0.05 7.09 -25.92 -0.18 -0.14 16 23 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 24 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 25 H 0.06 -0.07 7.56 -51.93 -0.39 -0.46 16 26 H 0.05 -0.02 8.10 -51.93 -0.42 -0.45 16 27 H 0.05 -0.03 8.14 -51.93 -0.42 -0.46 16 28 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 29 H 0.06 -0.09 6.05 -51.93 -0.31 -0.40 16 30 H 0.05 -0.05 8.14 -51.93 -0.42 -0.48 16 31 H 0.06 -0.06 6.46 -51.93 -0.34 -0.40 16 32 H 0.10 -0.18 6.09 -51.93 -0.32 -0.50 16 33 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 34 H 0.41 -0.16 8.03 -40.82 -0.33 -0.49 16 35 H 0.16 -0.48 4.86 -52.49 -0.25 -0.74 16 36 H 0.13 -0.36 7.96 -51.93 -0.41 -0.78 16 37 H 0.38 -1.18 8.70 45.56 0.40 -0.78 16 38 H -0.25 -0.20 7.11 56.52 0.40 0.20 16 39 H -0.25 0.23 7.01 56.52 0.40 0.63 16 40 H 0.15 -0.30 8.06 -52.49 -0.42 -0.72 16 41 H 0.15 0.09 7.64 -52.49 -0.40 -0.31 16 42 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 43 H 0.10 -0.06 5.69 -51.93 -0.30 -0.36 16 LS Contribution 343.07 15.07 5.17 5.17 Total: 0.00 -5.83 343.07 -9.28 -15.12 By element: Atomic # 1 Polarization: -3.07 SS G_CDS: -6.47 Total: -9.54 kcal Atomic # 6 Polarization: 3.05 SS G_CDS: -2.16 Total: 0.89 kcal Atomic # 7 Polarization: -1.02 SS G_CDS: -0.38 Total: -1.40 kcal Atomic # 8 Polarization: -2.97 SS G_CDS: -0.37 Total: -3.34 kcal Atomic # 14 Polarization: -1.82 SS G_CDS: -5.08 Total: -6.91 kcal Total LS contribution 5.17 Total: 5.17 kcal Total: -5.83 -9.28 -15.12 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664192_13287726.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 2.988 kcal (2) G-P(sol) polarization free energy of solvation -5.835 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -2.846 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.283 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.118 kcal (6) G-S(sol) free energy of system = (1) + (5) -12.130 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds