Wall clock time and date at job start Sun Mar 7 2021 13:40:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.38975 * 119.95580 * 2 1 4 4 O 1.35711 * 119.91396 * 0.02562 * 3 2 1 5 5 C 1.39017 * 120.17834 * 179.97438 * 3 2 1 6 6 C 1.50696 * 119.96114 * 180.02562 * 5 3 2 7 7 O 1.42898 * 109.47328 * 75.02088 * 6 5 3 8 8 Si 1.86294 * 109.47306 * 195.02506 * 6 5 3 9 9 C 1.37689 * 120.08414 * 0.04659 * 5 3 2 10 10 C 1.39751 * 119.91025 * 359.97438 * 9 5 3 11 11 C 1.47605 * 120.08322 * 180.02562 * 10 9 5 12 12 O 1.21591 * 120.00414 * 359.97438 * 11 10 9 13 13 N 1.34771 * 119.99841 * 179.97438 * 11 10 9 14 14 C 1.46501 * 120.00348 * 179.97438 * 13 11 10 15 15 H 1.09003 * 112.90743 * 336.25344 * 14 13 11 16 16 C 1.53781 * 113.61355 * 107.49791 * 14 13 11 17 17 C 1.53782 * 87.07998 * 89.12141 * 16 14 13 18 18 H 1.09000 * 113.68951 * 270.87412 * 17 16 14 19 19 C 1.52999 * 113.61609 * 139.97923 * 17 16 14 20 20 C 1.53004 * 109.47131 * 317.50906 * 19 17 16 21 21 C 1.53000 * 109.47177 * 77.50801 * 19 17 16 22 22 C 1.53000 * 109.47099 * 197.51045 * 19 17 16 23 23 C 1.53776 * 87.08239 * 25.43296 * 17 16 14 24 24 C 1.37720 * 119.95576 * 180.32617 * 2 1 3 25 25 H 1.09001 * 109.47085 * 89.99962 * 1 2 3 26 26 H 1.08998 * 109.47253 * 209.99826 * 1 2 3 27 27 H 1.09007 * 109.46932 * 330.00117 * 1 2 3 28 28 H 0.96696 * 114.00220 * 269.97629 * 4 3 2 29 29 H 1.09012 * 109.46767 * 315.02417 * 6 5 3 30 30 H 0.96702 * 113.99502 * 60.00123 * 7 6 5 31 31 H 1.48504 * 110.00109 * 179.97438 * 8 6 5 32 32 H 1.48494 * 110.00131 * 301.31451 * 8 6 5 33 33 H 1.08006 * 120.04064 * 179.97438 * 9 5 3 34 34 H 0.97001 * 120.00574 * 359.97438 * 13 11 10 35 35 H 1.09006 * 113.61646 * 203.66443 * 16 14 13 36 36 H 1.08996 * 113.61829 * 334.57635 * 16 14 13 37 37 H 1.09002 * 109.47037 * 66.29925 * 20 19 17 38 38 H 1.08999 * 109.46731 * 186.29779 * 20 19 17 39 39 H 1.08998 * 109.46823 * 306.29744 * 20 19 17 40 40 H 1.09006 * 109.46864 * 59.99888 * 21 19 17 41 41 H 1.09001 * 109.47376 * 179.97438 * 21 19 17 42 42 H 1.08995 * 109.47069 * 300.00196 * 21 19 17 43 43 H 1.08996 * 109.47176 * 60.00025 * 22 19 17 44 44 H 1.09001 * 109.47038 * 180.02562 * 22 19 17 45 45 H 1.08996 * 109.47377 * 299.99454 * 22 19 17 46 46 H 1.08997 * 113.62087 * 220.02450 * 23 17 16 47 47 H 1.09000 * 113.69337 * 89.12574 * 23 17 16 48 48 H 1.08002 * 120.04959 * 359.97438 * 24 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2010 1.2041 0.0000 4 8 1.5197 2.3778 0.0005 5 6 3.5911 1.2095 0.0005 6 6 4.3386 2.5180 0.0011 7 8 4.2721 3.1041 1.3027 8 14 6.1198 2.2159 -0.4536 9 6 4.2859 0.0208 0.0001 10 6 3.5918 -1.1921 -0.0003 11 6 4.3328 -2.4687 -0.0002 12 8 5.5487 -2.4660 -0.0002 13 7 3.6616 -3.6374 -0.0001 14 6 4.3970 -4.9045 -0.0006 15 1 5.4047 -4.8101 -0.4053 16 6 4.3403 -5.6501 1.3432 17 6 3.0630 -6.3300 0.8224 18 1 2.1503 -5.7781 1.0472 19 6 2.9657 -7.8127 1.1868 20 6 4.3289 -8.4778 0.9860 21 6 2.5411 -7.9515 2.6501 22 6 1.9298 -8.4918 0.2886 23 6 3.6015 -6.0783 -0.5958 24 6 2.1947 -1.1932 -0.0068 25 1 -0.3633 0.0000 -1.0277 26 1 -0.3633 -0.8900 0.5138 27 1 -0.3633 0.8901 0.5138 28 1 1.3223 2.7184 -0.8827 29 1 3.8878 3.1943 -0.7254 30 1 4.6558 2.5559 2.0009 31 1 6.8677 3.4988 -0.4572 32 1 6.7369 1.2705 0.5110 33 1 5.3660 0.0258 0.0001 34 1 2.6916 -3.6397 0.0002 35 1 5.1708 -6.3396 1.4954 36 1 4.1692 -4.9964 2.1984 37 1 5.0409 -8.0711 1.7043 38 1 4.2343 -9.5531 1.1373 39 1 4.6826 -8.2829 -0.0264 40 1 1.5699 -7.4777 2.7931 41 1 2.4713 -9.0079 2.9096 42 1 3.2791 -7.4678 3.2900 43 1 2.2323 -8.3929 -0.7539 44 1 1.8602 -9.5480 0.5485 45 1 0.9586 -8.0181 0.4316 46 1 2.8343 -5.7701 -1.3060 47 1 4.2301 -6.8840 -0.9750 48 1 1.6548 -2.1286 -0.0117 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17664192_13287732.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 13:40:12 Heat of formation + Delta-G solvation = -67.406771 kcal Electronic energy + Delta-G solvation = -27546.048912 eV Core-core repulsion = 23761.176074 eV Total energy + Delta-G solvation = -3784.872838 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 320.182 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -41.92586 -41.19185 -39.92386 -37.99113 -37.52140 -36.56236 -34.15494 -33.80687 -31.57844 -28.43603 -28.19766 -27.99731 -27.02340 -26.27115 -26.15728 -24.53576 -22.15550 -21.64568 -21.17580 -19.61813 -19.06955 -18.84271 -18.14146 -17.26003 -16.93341 -16.60212 -16.35336 -16.12297 -16.03483 -15.82207 -15.70924 -15.12310 -15.10075 -14.76122 -14.45177 -14.22314 -14.08359 -13.88974 -13.79514 -13.50631 -13.30414 -13.19234 -12.91799 -12.84860 -12.71459 -12.67963 -12.47393 -12.38601 -12.01207 -11.93605 -11.83794 -11.64280 -11.33984 -11.11079 -11.08837 -10.85845 -10.63647 -10.18277 -9.98498 -9.65080 -5.02919 -0.40805 0.05774 1.19368 1.51431 1.58568 1.84601 1.98368 2.54244 3.11401 3.29627 3.49402 3.53206 3.55312 3.58115 3.70673 3.77966 3.87842 4.00934 4.09348 4.15384 4.28216 4.30832 4.36273 4.46185 4.56672 4.61929 4.71608 4.74904 4.75805 4.79664 4.82558 4.84239 4.85638 4.98263 5.00927 5.03752 5.04705 5.07876 5.15421 5.16130 5.20900 5.23401 5.26655 5.32121 5.42407 5.46940 5.52757 5.59790 5.69627 6.38413 6.41709 6.76591 7.08882 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.112 4.112 2 C -0.119 4.119 3 C 0.160 3.840 4 O -0.495 6.495 5 C -0.152 4.152 6 C -0.061 4.061 7 O -0.540 6.540 8 Si 0.749 3.251 9 C -0.065 4.065 10 C -0.151 4.151 11 C 0.560 3.440 12 O -0.579 6.579 13 N -0.692 5.692 14 C 0.110 3.890 15 H 0.082 0.918 16 C -0.151 4.151 17 C -0.089 4.089 18 H 0.097 0.903 19 C -0.057 4.057 20 C -0.150 4.150 21 C -0.142 4.142 22 C -0.140 4.140 23 C -0.131 4.131 24 C -0.054 4.054 25 H 0.089 0.911 26 H 0.083 0.917 27 H 0.068 0.932 28 H 0.413 0.587 29 H 0.134 0.866 30 H 0.382 0.618 31 H -0.291 1.291 32 H -0.297 1.297 33 H 0.131 0.869 34 H 0.414 0.586 35 H 0.096 0.904 36 H 0.057 0.943 37 H 0.055 0.945 38 H 0.052 0.948 39 H 0.063 0.937 40 H 0.056 0.944 41 H 0.052 0.948 42 H 0.049 0.951 43 H 0.060 0.940 44 H 0.050 0.950 45 H 0.057 0.943 46 H 0.085 0.915 47 H 0.103 0.897 48 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.619 -3.617 -4.086 8.579 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.168 4.168 2 C -0.120 4.120 3 C 0.114 3.886 4 O -0.309 6.309 5 C -0.153 4.153 6 C -0.171 4.171 7 O -0.347 6.347 8 Si 0.656 3.344 9 C -0.084 4.084 10 C -0.154 4.154 11 C 0.349 3.651 12 O -0.460 6.460 13 N -0.343 5.343 14 C 0.005 3.995 15 H 0.100 0.900 16 C -0.190 4.190 17 C -0.108 4.108 18 H 0.115 0.885 19 C -0.057 4.057 20 C -0.207 4.207 21 C -0.199 4.199 22 C -0.197 4.197 23 C -0.169 4.169 24 C -0.072 4.072 25 H 0.107 0.893 26 H 0.102 0.898 27 H 0.087 0.913 28 H 0.274 0.726 29 H 0.152 0.848 30 H 0.231 0.769 31 H -0.219 1.219 32 H -0.224 1.224 33 H 0.148 0.852 34 H 0.253 0.747 35 H 0.115 0.885 36 H 0.076 0.924 37 H 0.074 0.926 38 H 0.071 0.929 39 H 0.082 0.918 40 H 0.075 0.925 41 H 0.071 0.929 42 H 0.068 0.932 43 H 0.079 0.921 44 H 0.069 0.931 45 H 0.076 0.924 46 H 0.103 0.897 47 H 0.122 0.878 48 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -5.215 -3.149 -3.588 7.070 hybrid contribution -0.145 0.079 1.016 1.030 sum -5.360 -3.071 -2.572 6.691 Atomic orbital electron populations 1.20771 0.88190 1.04020 1.03850 1.20443 0.98347 0.91680 1.01523 1.18428 0.88604 0.85934 0.95617 1.84733 1.75405 1.35548 1.35256 1.20507 0.94193 0.95351 1.05288 1.24891 1.09902 0.93982 0.88291 1.86613 1.82900 1.48164 1.17059 0.94186 0.73291 0.77134 0.89833 1.21110 1.00367 0.91030 0.95910 1.19771 0.94380 0.92454 1.08797 1.18414 0.86786 0.84569 0.75349 1.90789 1.15334 1.88101 1.51749 1.45455 1.10722 1.04283 1.73888 1.21911 0.96652 0.82691 0.98236 0.89987 1.23588 0.99615 0.99101 0.96655 1.22595 0.97428 0.95100 0.95635 0.88529 1.20407 0.95708 0.94213 0.95399 1.22056 0.96338 1.00196 1.02099 1.21852 1.01138 1.01489 0.95436 1.21834 0.98375 1.00004 0.99502 1.23406 0.99911 0.96533 0.97039 1.21345 0.91558 0.99073 0.95253 0.89284 0.89839 0.91258 0.72573 0.84833 0.76893 1.21860 1.22431 0.85179 0.74742 0.88524 0.92371 0.92637 0.92890 0.91766 0.92485 0.92927 0.93168 0.92123 0.93082 0.92407 0.89661 0.87836 0.82150 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.77 9.78 71.24 0.70 1.46 16 2 C -0.12 0.33 5.89 -19.81 -0.12 0.22 16 3 C 0.16 -0.01 6.66 22.63 0.15 0.14 16 4 O -0.50 0.68 11.84 -90.32 -1.07 -0.39 16 5 C -0.15 -0.24 5.27 -19.81 -0.10 -0.35 16 6 C -0.06 -0.08 2.37 71.23 0.17 0.09 16 7 O -0.54 -2.93 12.88 -148.98 -1.92 -4.85 16 8 Si 0.75 1.71 30.24 68.60 2.07 3.78 16 9 C -0.07 -0.26 8.20 22.51 0.18 -0.08 16 10 C -0.15 -0.35 5.87 -20.08 -0.12 -0.47 16 11 C 0.56 3.16 7.76 86.72 0.67 3.83 16 12 O -0.58 -8.42 15.94 -4.00 -0.06 -8.48 16 13 N -0.69 0.83 5.21 -443.12 -2.31 -1.48 16 14 C 0.11 -0.05 4.32 45.52 0.20 0.14 16 15 H 0.08 0.36 7.47 -2.39 -0.02 0.35 16 16 C -0.15 0.20 7.04 31.12 0.22 0.42 16 17 C -0.09 0.45 2.91 -10.27 -0.03 0.42 16 18 H 0.10 -0.63 8.14 -2.39 -0.02 -0.65 16 19 C -0.06 0.23 0.68 -52.18 -0.04 0.20 16 20 C -0.15 0.48 7.53 71.98 0.54 1.02 16 21 C -0.14 0.38 8.42 71.98 0.61 0.99 16 22 C -0.14 0.63 8.33 71.98 0.60 1.23 16 23 C -0.13 0.70 6.46 31.12 0.20 0.90 16 24 C -0.05 0.19 9.18 22.50 0.21 0.39 16 25 H 0.09 -0.85 8.14 -2.39 -0.02 -0.87 16 26 H 0.08 -0.76 8.09 -2.39 -0.02 -0.78 16 27 H 0.07 -0.31 7.52 -2.38 -0.02 -0.32 16 28 H 0.41 -4.44 9.06 -74.06 -0.67 -5.11 16 29 H 0.13 -0.32 7.82 -2.38 -0.02 -0.34 16 30 H 0.38 0.38 8.70 -74.06 -0.64 -0.26 16 31 H -0.29 -2.45 7.11 99.48 0.71 -1.74 16 32 H -0.30 -2.66 6.68 99.48 0.66 -2.00 16 33 H 0.13 0.85 4.43 -2.91 -0.01 0.84 16 34 H 0.41 -3.13 6.72 -92.71 -0.62 -3.75 16 35 H 0.10 -0.10 5.72 -2.38 -0.01 -0.11 16 36 H 0.06 0.07 8.14 -2.39 -0.02 0.05 16 37 H 0.05 -0.13 6.43 -2.39 -0.02 -0.14 16 38 H 0.05 -0.13 8.14 -2.39 -0.02 -0.15 16 39 H 0.06 -0.26 6.00 -2.39 -0.01 -0.28 16 40 H 0.06 -0.18 8.14 -2.38 -0.02 -0.20 16 41 H 0.05 -0.11 8.14 -2.39 -0.02 -0.13 16 42 H 0.05 -0.07 8.05 -2.39 -0.02 -0.09 16 43 H 0.06 -0.31 7.61 -2.39 -0.02 -0.33 16 44 H 0.05 -0.17 8.14 -2.39 -0.02 -0.19 16 45 H 0.06 -0.29 8.14 -2.39 -0.02 -0.30 16 46 H 0.08 -0.62 8.14 -2.39 -0.02 -0.64 16 47 H 0.10 -0.57 6.02 -2.39 -0.01 -0.59 16 48 H 0.16 -1.65 6.39 -2.91 -0.02 -1.67 16 Total: 0.00 -20.07 375.89 -0.19 -20.26 By element: Atomic # 1 Polarization: -18.47 SS G_CDS: -0.94 Total: -19.42 kcal Atomic # 6 Polarization: 6.54 SS G_CDS: 4.04 Total: 10.58 kcal Atomic # 7 Polarization: 0.83 SS G_CDS: -2.31 Total: -1.48 kcal Atomic # 8 Polarization: -10.67 SS G_CDS: -3.05 Total: -13.72 kcal Atomic # 14 Polarization: 1.71 SS G_CDS: 2.07 Total: 3.78 kcal Total: -20.07 -0.19 -20.26 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664192_13287732.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -47.149 kcal (2) G-P(sol) polarization free energy of solvation -20.070 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -67.219 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.188 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.258 kcal (6) G-S(sol) free energy of system = (1) + (5) -67.407 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds