Wall clock time and date at job start Sun Mar 7 2021 13:40:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.36421 * 125.79660 * 2 1 4 4 C 1.47370 * 127.19546 * 359.73570 * 3 2 1 5 5 O 1.21618 * 120.00184 * 0.02562 * 4 3 2 6 6 N 1.34782 * 120.00087 * 180.02562 * 4 3 2 7 7 C 1.46494 * 119.99932 * 179.97438 * 6 4 3 8 8 H 1.08999 * 112.85371 * 336.19531 * 7 6 4 9 9 C 1.53784 * 113.61484 * 107.50462 * 7 6 4 10 10 C 1.53774 * 87.08263 * 89.11261 * 9 7 6 11 11 H 1.08999 * 113.69383 * 270.87170 * 10 9 7 12 12 C 1.53007 * 113.61326 * 139.98173 * 10 9 7 13 13 C 1.52994 * 109.47236 * 317.53311 * 12 10 9 14 14 C 1.53000 * 109.46966 * 77.53455 * 12 10 9 15 15 C 1.53001 * 109.46898 * 197.53115 * 12 10 9 16 16 C 1.53779 * 87.08083 * 25.43501 * 10 9 7 17 17 C 1.47029 * 105.61138 * 179.73786 * 3 2 1 18 18 C 1.34180 * 105.95362 * 359.97438 * 17 3 2 19 19 C 1.50697 * 125.43553 * 179.97438 * 18 17 3 20 20 O 1.42898 * 109.47131 * 65.00097 * 19 18 17 21 21 Si 1.86298 * 109.47046 * 185.00258 * 19 18 17 22 22 O 1.33648 * 125.80181 * 179.68909 * 2 1 3 23 23 H 1.08993 * 109.47428 * 90.00243 * 1 2 3 24 24 H 1.09005 * 109.47192 * 210.00343 * 1 2 3 25 25 H 1.09000 * 109.47290 * 329.99902 * 1 2 3 26 26 H 0.97002 * 119.99894 * 359.97438 * 6 4 3 27 27 H 1.08997 * 113.61566 * 203.66310 * 9 7 6 28 28 H 1.09006 * 113.61353 * 334.56659 * 9 7 6 29 29 H 1.09003 * 109.47136 * 66.29972 * 13 12 10 30 30 H 1.09004 * 109.47389 * 186.30117 * 13 12 10 31 31 H 1.08997 * 109.47083 * 306.30237 * 13 12 10 32 32 H 1.08996 * 109.47133 * 60.00033 * 14 12 10 33 33 H 1.09000 * 109.47003 * 180.02562 * 14 12 10 34 34 H 1.09003 * 109.47201 * 299.99951 * 14 12 10 35 35 H 1.09001 * 109.47065 * 60.00445 * 15 12 10 36 36 H 1.09000 * 109.46747 * 179.97438 * 15 12 10 37 37 H 1.08996 * 109.47532 * 300.00170 * 15 12 10 38 38 H 1.09000 * 113.61339 * 220.01437 * 16 10 9 39 39 H 1.08997 * 113.61407 * 89.11738 * 16 10 9 40 40 H 1.07998 * 127.01816 * 179.97438 * 17 3 2 41 41 H 1.09001 * 109.46993 * 304.99807 * 19 18 17 42 42 H 0.96707 * 113.99731 * 180.02562 * 20 19 18 43 43 H 1.48500 * 110.00063 * 178.68147 * 21 19 18 44 44 H 1.48504 * 109.99728 * 299.99715 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3049 1.1065 0.0000 4 6 1.8739 2.5158 -0.0054 5 8 0.6889 2.7892 -0.0101 6 7 2.7929 3.5016 -0.0052 7 6 2.3644 4.9025 -0.0111 8 1 1.3633 5.0372 -0.4206 9 6 2.5846 5.6198 1.3313 10 6 3.9845 5.9902 0.8140 11 1 4.7474 5.2462 1.0435 12 6 4.4148 7.4133 1.1757 13 6 3.2388 8.3698 0.9689 14 6 4.8556 7.4561 2.6402 15 6 5.5804 7.8369 0.2798 16 6 3.4076 5.8633 -0.6057 17 6 3.6849 0.5992 0.0065 18 6 3.5859 -0.7389 0.0103 19 6 4.7459 -1.7009 0.0168 20 8 5.4722 -1.5629 1.2397 21 14 4.1075 -3.4446 -0.1330 22 8 2.2888 -1.0839 0.0059 23 1 -0.3634 0.0000 -1.0276 24 1 -0.3634 -0.8900 0.5139 25 1 -0.3634 0.8900 0.5138 26 1 3.7381 3.2836 -0.0010 27 1 1.9318 6.4801 1.4789 28 1 2.5999 4.9467 2.1886 29 1 2.4510 8.1373 1.6855 30 1 3.5744 9.3961 1.1182 31 1 2.8529 8.2575 -0.0443 32 1 5.6934 6.7747 2.7876 33 1 5.1616 8.4700 2.8981 34 1 4.0252 7.1543 3.2786 35 1 5.2664 7.8064 -0.7636 36 1 5.8866 8.8509 0.5371 37 1 6.4183 7.1555 0.4271 38 1 4.0873 5.3869 -1.3123 39 1 2.9798 6.7902 -0.9877 40 1 4.5927 1.1842 0.0079 41 1 5.4044 -1.4817 -0.8236 42 1 6.2349 -2.1530 1.3129 43 1 5.2433 -4.4008 -0.1597 44 1 3.2082 -3.7559 1.0071 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664192_13308374.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 13:40:23 Heat of formation + Delta-G solvation = -36.297390 kcal Electronic energy + Delta-G solvation = -24153.677103 eV Core-core repulsion = 20653.917029 eV Total energy + Delta-G solvation = -3499.760074 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 294.166 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -43.68051 -41.48125 -39.70545 -38.14518 -36.49690 -34.28189 -33.47400 -32.96603 -29.48051 -28.51824 -28.26932 -26.52540 -26.27215 -25.40936 -24.02564 -22.31021 -21.13505 -20.49437 -19.08669 -18.90853 -18.39173 -17.26744 -17.07721 -16.84907 -16.35848 -16.05679 -15.92653 -15.63626 -15.45943 -15.05869 -14.78070 -14.36872 -14.16975 -13.98527 -13.97148 -13.86270 -13.83392 -13.46396 -13.21063 -13.12780 -12.78667 -12.73658 -12.60278 -12.46598 -12.10357 -12.06208 -11.89213 -11.37833 -11.13335 -10.94850 -10.87815 -10.81656 -10.64979 -9.96573 -9.49554 -5.02878 0.35787 0.85944 1.09539 1.36801 1.67451 1.91505 2.20315 2.41511 3.17947 3.43067 3.51240 3.53478 3.71522 3.76486 3.79439 3.89778 4.02789 4.09529 4.21152 4.23324 4.24480 4.45326 4.51319 4.60246 4.66490 4.67789 4.73299 4.73828 4.76398 4.81395 4.90799 4.91826 4.96514 5.00287 5.09220 5.10911 5.14811 5.17965 5.23641 5.27684 5.34925 5.44221 5.46726 5.70833 5.99705 6.21778 6.57339 7.31154 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 C 0.098 3.902 3 C -0.253 4.253 4 C 0.596 3.404 5 O -0.538 6.538 6 N -0.706 5.706 7 C 0.121 3.879 8 H 0.103 0.897 9 C -0.151 4.151 10 C -0.099 4.099 11 H 0.087 0.913 12 C -0.059 4.059 13 C -0.148 4.148 14 C -0.141 4.141 15 C -0.141 4.141 16 C -0.144 4.144 17 C -0.146 4.146 18 C -0.009 4.009 19 C -0.037 4.037 20 O -0.534 6.534 21 Si 0.698 3.302 22 O -0.168 6.168 23 H 0.094 0.906 24 H 0.081 0.919 25 H 0.111 0.889 26 H 0.400 0.600 27 H 0.097 0.903 28 H 0.069 0.931 29 H 0.059 0.941 30 H 0.055 0.945 31 H 0.059 0.941 32 H 0.053 0.947 33 H 0.054 0.946 34 H 0.055 0.945 35 H 0.055 0.945 36 H 0.054 0.946 37 H 0.053 0.947 38 H 0.071 0.929 39 H 0.100 0.900 40 H 0.157 0.843 41 H 0.097 0.903 42 H 0.388 0.612 43 H -0.252 1.252 44 H -0.251 1.251 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.111 -0.538 -2.655 4.125 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.142 4.142 2 C 0.044 3.956 3 C -0.258 4.258 4 C 0.385 3.615 5 O -0.417 6.417 6 N -0.356 5.356 7 C 0.015 3.985 8 H 0.121 0.879 9 C -0.190 4.190 10 C -0.117 4.117 11 H 0.105 0.895 12 C -0.059 4.059 13 C -0.205 4.205 14 C -0.199 4.199 15 C -0.198 4.198 16 C -0.182 4.182 17 C -0.166 4.166 18 C -0.057 4.057 19 C -0.146 4.146 20 O -0.343 6.343 21 Si 0.597 3.403 22 O -0.065 6.065 23 H 0.112 0.888 24 H 0.100 0.900 25 H 0.129 0.871 26 H 0.235 0.765 27 H 0.116 0.884 28 H 0.087 0.913 29 H 0.078 0.922 30 H 0.074 0.926 31 H 0.078 0.922 32 H 0.072 0.928 33 H 0.073 0.927 34 H 0.074 0.926 35 H 0.075 0.925 36 H 0.073 0.927 37 H 0.072 0.928 38 H 0.090 0.910 39 H 0.118 0.882 40 H 0.174 0.826 41 H 0.115 0.885 42 H 0.238 0.762 43 H -0.176 1.176 44 H -0.175 1.175 Dipole moment (debyes) X Y Z Total from point charges 1.680 -0.985 -2.176 2.920 hybrid contribution 1.822 0.214 0.741 1.979 sum 3.502 -0.771 -1.434 3.863 Atomic orbital electron populations 1.20705 0.83229 1.05423 1.04844 1.22901 0.94035 0.82709 0.95938 1.21090 0.93178 0.93781 1.17708 1.17141 0.85395 0.83626 0.75359 1.90773 1.16500 1.83966 1.50457 1.45438 1.09582 1.05205 1.75423 1.21828 0.99542 0.79697 0.97410 0.87860 1.23597 0.97158 1.00688 0.97511 1.22638 0.96588 0.96584 0.95914 0.89517 1.20428 0.95622 0.94254 0.95624 1.22040 0.97738 0.98822 1.01927 1.21848 1.01144 1.01691 0.95183 1.21848 0.97454 1.01117 0.99421 1.23463 0.98086 0.99726 0.96916 1.22522 0.96448 0.93388 1.04201 1.20938 0.82103 0.94044 1.08570 1.23806 0.91793 1.09151 0.89871 1.86568 1.45683 1.64573 1.37428 0.94434 0.82981 0.72912 0.89966 1.83651 1.16197 1.35115 1.71499 0.88792 0.90024 0.87076 0.76487 0.88437 0.91269 0.92215 0.92639 0.92216 0.92793 0.92668 0.92603 0.92545 0.92682 0.92783 0.90995 0.88221 0.82565 0.88492 0.76250 1.17641 1.17480 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.05 9.88 36.01 0.36 0.31 16 2 C 0.10 0.25 7.37 -34.96 -0.26 -0.01 16 3 C -0.25 -0.71 6.31 -103.27 -0.65 -1.37 16 4 C 0.60 2.09 7.81 -12.54 -0.10 1.99 16 5 O -0.54 -3.30 14.45 5.26 0.08 -3.23 16 6 N -0.71 -0.60 5.26 -54.11 -0.28 -0.89 16 7 C 0.12 0.06 4.32 -67.12 -0.29 -0.23 16 8 H 0.10 0.21 7.46 -51.93 -0.39 -0.18 16 9 C -0.15 0.01 7.04 -25.92 -0.18 -0.17 16 10 C -0.10 0.11 2.91 -89.81 -0.26 -0.15 16 11 H 0.09 -0.10 8.14 -51.93 -0.42 -0.52 16 12 C -0.06 0.06 0.68 -154.51 -0.10 -0.04 16 13 C -0.15 0.15 7.53 37.15 0.28 0.43 16 14 C -0.14 0.08 8.42 37.16 0.31 0.39 16 15 C -0.14 0.15 8.33 37.16 0.31 0.46 16 16 C -0.14 0.19 6.46 -25.92 -0.17 0.02 16 17 C -0.15 -0.21 10.48 -37.45 -0.39 -0.60 16 18 C -0.01 -0.01 6.22 -35.74 -0.22 -0.24 16 19 C -0.04 0.03 2.96 36.00 0.11 0.13 16 20 O -0.53 -0.09 12.86 -35.23 -0.45 -0.54 16 21 Si 0.70 -0.70 32.09 -169.99 -5.46 -6.16 16 22 O -0.17 -0.41 8.90 7.65 0.07 -0.35 16 23 H 0.09 -0.06 8.14 -51.93 -0.42 -0.48 16 24 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 25 H 0.11 0.20 6.50 -51.93 -0.34 -0.14 16 26 H 0.40 -0.44 7.87 -40.82 -0.32 -0.76 16 27 H 0.10 -0.03 5.72 -51.93 -0.30 -0.33 16 28 H 0.07 0.08 8.14 -51.93 -0.42 -0.34 16 29 H 0.06 -0.05 6.43 -51.93 -0.33 -0.39 16 30 H 0.05 -0.04 8.14 -51.93 -0.42 -0.47 16 31 H 0.06 -0.08 6.00 -51.93 -0.31 -0.39 16 32 H 0.05 -0.02 8.14 -51.93 -0.42 -0.45 16 33 H 0.05 -0.03 8.14 -51.93 -0.42 -0.45 16 34 H 0.05 -0.01 8.05 -51.93 -0.42 -0.43 16 35 H 0.06 -0.06 7.61 -51.93 -0.39 -0.46 16 36 H 0.05 -0.04 8.14 -51.93 -0.42 -0.47 16 37 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 38 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 39 H 0.10 -0.16 6.02 -51.93 -0.31 -0.47 16 40 H 0.16 -0.13 7.74 -52.49 -0.41 -0.54 16 41 H 0.10 -0.33 7.96 -51.93 -0.41 -0.74 16 42 H 0.39 -1.65 8.74 45.56 0.40 -1.25 16 43 H -0.25 -0.02 7.11 56.52 0.40 0.38 16 44 H -0.25 -0.75 7.11 56.52 0.40 -0.35 16 LS Contribution 352.02 15.07 5.30 5.30 Total: 0.00 -6.70 352.02 -8.97 -15.67 By element: Atomic # 1 Polarization: -3.77 SS G_CDS: -6.96 Total: -10.74 kcal Atomic # 6 Polarization: 2.18 SS G_CDS: -1.26 Total: 0.92 kcal Atomic # 7 Polarization: -0.60 SS G_CDS: -0.28 Total: -0.89 kcal Atomic # 8 Polarization: -3.81 SS G_CDS: -0.31 Total: -4.11 kcal Atomic # 14 Polarization: -0.70 SS G_CDS: -5.46 Total: -6.16 kcal Total LS contribution 5.30 Total: 5.30 kcal Total: -6.70 -8.97 -15.67 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664192_13308374.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -20.629 kcal (2) G-P(sol) polarization free energy of solvation -6.700 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -27.329 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.968 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.668 kcal (6) G-S(sol) free energy of system = (1) + (5) -36.297 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds