Wall clock time and date at job start Sun Mar 7 2021 13:40:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.36421 * 125.79660 * 2 1 4 4 C 1.47370 * 127.19546 * 359.73570 * 3 2 1 5 5 O 1.21618 * 120.00184 * 0.02562 * 4 3 2 6 6 N 1.34782 * 120.00087 * 180.02562 * 4 3 2 7 7 C 1.46494 * 119.99932 * 179.97438 * 6 4 3 8 8 H 1.08999 * 112.85371 * 336.19531 * 7 6 4 9 9 C 1.53784 * 113.61484 * 107.50462 * 7 6 4 10 10 C 1.53774 * 87.08263 * 89.11261 * 9 7 6 11 11 H 1.08999 * 113.69383 * 270.87170 * 10 9 7 12 12 C 1.53007 * 113.61326 * 139.98173 * 10 9 7 13 13 C 1.52994 * 109.47236 * 317.53311 * 12 10 9 14 14 C 1.53000 * 109.46966 * 77.53455 * 12 10 9 15 15 C 1.53001 * 109.46898 * 197.53115 * 12 10 9 16 16 C 1.53779 * 87.08083 * 25.43501 * 10 9 7 17 17 C 1.47029 * 105.61138 * 179.73786 * 3 2 1 18 18 C 1.34180 * 105.95362 * 359.97438 * 17 3 2 19 19 C 1.50697 * 125.43553 * 179.97438 * 18 17 3 20 20 O 1.42898 * 109.47131 * 65.00097 * 19 18 17 21 21 Si 1.86298 * 109.47046 * 185.00258 * 19 18 17 22 22 O 1.33648 * 125.80181 * 179.68909 * 2 1 3 23 23 H 1.08993 * 109.47428 * 90.00243 * 1 2 3 24 24 H 1.09005 * 109.47192 * 210.00343 * 1 2 3 25 25 H 1.09000 * 109.47290 * 329.99902 * 1 2 3 26 26 H 0.97002 * 119.99894 * 359.97438 * 6 4 3 27 27 H 1.08997 * 113.61566 * 203.66310 * 9 7 6 28 28 H 1.09006 * 113.61353 * 334.56659 * 9 7 6 29 29 H 1.09003 * 109.47136 * 66.29972 * 13 12 10 30 30 H 1.09004 * 109.47389 * 186.30117 * 13 12 10 31 31 H 1.08997 * 109.47083 * 306.30237 * 13 12 10 32 32 H 1.08996 * 109.47133 * 60.00033 * 14 12 10 33 33 H 1.09000 * 109.47003 * 180.02562 * 14 12 10 34 34 H 1.09003 * 109.47201 * 299.99951 * 14 12 10 35 35 H 1.09001 * 109.47065 * 60.00445 * 15 12 10 36 36 H 1.09000 * 109.46747 * 179.97438 * 15 12 10 37 37 H 1.08996 * 109.47532 * 300.00170 * 15 12 10 38 38 H 1.09000 * 113.61339 * 220.01437 * 16 10 9 39 39 H 1.08997 * 113.61407 * 89.11738 * 16 10 9 40 40 H 1.07998 * 127.01816 * 179.97438 * 17 3 2 41 41 H 1.09001 * 109.46993 * 304.99807 * 19 18 17 42 42 H 0.96707 * 113.99731 * 180.02562 * 20 19 18 43 43 H 1.48500 * 110.00063 * 178.68147 * 21 19 18 44 44 H 1.48504 * 109.99728 * 299.99715 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3049 1.1065 0.0000 4 6 1.8739 2.5158 -0.0054 5 8 0.6889 2.7892 -0.0101 6 7 2.7929 3.5016 -0.0052 7 6 2.3644 4.9025 -0.0111 8 1 1.3633 5.0372 -0.4206 9 6 2.5846 5.6198 1.3313 10 6 3.9845 5.9902 0.8140 11 1 4.7474 5.2462 1.0435 12 6 4.4148 7.4133 1.1757 13 6 3.2388 8.3698 0.9689 14 6 4.8556 7.4561 2.6402 15 6 5.5804 7.8369 0.2798 16 6 3.4076 5.8633 -0.6057 17 6 3.6849 0.5992 0.0065 18 6 3.5859 -0.7389 0.0103 19 6 4.7459 -1.7009 0.0168 20 8 5.4722 -1.5629 1.2397 21 14 4.1075 -3.4446 -0.1330 22 8 2.2888 -1.0839 0.0059 23 1 -0.3634 0.0000 -1.0276 24 1 -0.3634 -0.8900 0.5139 25 1 -0.3634 0.8900 0.5138 26 1 3.7381 3.2836 -0.0010 27 1 1.9318 6.4801 1.4789 28 1 2.5999 4.9467 2.1886 29 1 2.4510 8.1373 1.6855 30 1 3.5744 9.3961 1.1182 31 1 2.8529 8.2575 -0.0443 32 1 5.6934 6.7747 2.7876 33 1 5.1616 8.4700 2.8981 34 1 4.0252 7.1543 3.2786 35 1 5.2664 7.8064 -0.7636 36 1 5.8866 8.8509 0.5371 37 1 6.4183 7.1555 0.4271 38 1 4.0873 5.3869 -1.3123 39 1 2.9798 6.7902 -0.9877 40 1 4.5927 1.1842 0.0079 41 1 5.4044 -1.4817 -0.8236 42 1 6.2349 -2.1530 1.3129 43 1 5.2433 -4.4008 -0.1597 44 1 3.2082 -3.7559 1.0071 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17664192_13308374.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 13:40:23 Heat of formation + Delta-G solvation = -32.537412 kcal Electronic energy + Delta-G solvation = -24153.514059 eV Core-core repulsion = 20653.917029 eV Total energy + Delta-G solvation = -3499.597029 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 294.166 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -43.79200 -41.52952 -39.87520 -38.08739 -36.54009 -34.43531 -33.54582 -33.04394 -29.50191 -28.45178 -28.20292 -26.57806 -26.24191 -25.42820 -24.12514 -22.39727 -21.23439 -20.57510 -19.07512 -18.85989 -18.47052 -17.37747 -17.16209 -16.91130 -16.38215 -16.08659 -15.95645 -15.71933 -15.48489 -15.07454 -14.87937 -14.37709 -14.22350 -14.06568 -14.00345 -13.86572 -13.80527 -13.46887 -13.19375 -13.13985 -12.77534 -12.68917 -12.65559 -12.39976 -12.16945 -12.02346 -11.84988 -11.35313 -11.12034 -11.10314 -10.96468 -10.86637 -10.63056 -10.09158 -9.59317 -4.95508 0.19538 0.78268 1.15387 1.35119 1.67107 1.93527 2.09728 2.21126 3.19763 3.51401 3.52701 3.56801 3.68993 3.71272 3.77179 3.88367 4.08000 4.10711 4.27117 4.27460 4.29828 4.43449 4.55343 4.58793 4.62784 4.70928 4.74306 4.78016 4.79357 4.82701 4.87661 4.97459 4.99399 5.03457 5.10499 5.14240 5.17789 5.19445 5.22026 5.26396 5.41201 5.48343 5.51227 5.69277 5.88844 6.46186 6.51092 7.13541 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.084 4.084 2 C 0.085 3.915 3 C -0.269 4.269 4 C 0.591 3.409 5 O -0.573 6.573 6 N -0.694 5.694 7 C 0.113 3.887 8 H 0.085 0.915 9 C -0.150 4.150 10 C -0.090 4.090 11 H 0.091 0.909 12 C -0.057 4.057 13 C -0.149 4.149 14 C -0.142 4.142 15 C -0.140 4.140 16 C -0.132 4.132 17 C -0.146 4.146 18 C -0.023 4.023 19 C -0.038 4.038 20 O -0.554 6.554 21 Si 0.763 3.237 22 O -0.175 6.175 23 H 0.105 0.895 24 H 0.095 0.905 25 H 0.096 0.904 26 H 0.411 0.589 27 H 0.099 0.901 28 H 0.055 0.945 29 H 0.056 0.944 30 H 0.053 0.947 31 H 0.064 0.936 32 H 0.054 0.946 33 H 0.053 0.947 34 H 0.050 0.950 35 H 0.060 0.940 36 H 0.052 0.948 37 H 0.054 0.946 38 H 0.081 0.919 39 H 0.106 0.894 40 H 0.179 0.821 41 H 0.133 0.867 42 H 0.406 0.594 43 H -0.262 1.262 44 H -0.312 1.312 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.632 -0.391 -3.470 5.800 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.140 4.140 2 C 0.032 3.968 3 C -0.274 4.274 4 C 0.381 3.619 5 O -0.455 6.455 6 N -0.344 5.344 7 C 0.008 3.992 8 H 0.103 0.897 9 C -0.188 4.188 10 C -0.108 4.108 11 H 0.109 0.891 12 C -0.057 4.057 13 C -0.206 4.206 14 C -0.199 4.199 15 C -0.197 4.197 16 C -0.169 4.169 17 C -0.165 4.165 18 C -0.070 4.070 19 C -0.146 4.146 20 O -0.366 6.366 21 Si 0.667 3.333 22 O -0.073 6.073 23 H 0.123 0.877 24 H 0.114 0.886 25 H 0.114 0.886 26 H 0.248 0.752 27 H 0.118 0.882 28 H 0.074 0.926 29 H 0.075 0.925 30 H 0.072 0.928 31 H 0.083 0.917 32 H 0.073 0.927 33 H 0.073 0.927 34 H 0.069 0.931 35 H 0.079 0.921 36 H 0.071 0.929 37 H 0.074 0.926 38 H 0.099 0.901 39 H 0.124 0.876 40 H 0.196 0.804 41 H 0.150 0.850 42 H 0.259 0.741 43 H -0.187 1.187 44 H -0.240 1.240 Dipole moment (debyes) X Y Z Total from point charges 3.260 -0.831 -3.011 4.515 hybrid contribution 1.332 0.146 1.070 1.715 sum 4.592 -0.685 -1.941 5.033 Atomic orbital electron populations 1.20716 0.82401 1.05322 1.05545 1.23252 0.94829 0.82875 0.95855 1.21206 0.94244 0.93486 1.18445 1.17336 0.85232 0.84323 0.75052 1.90749 1.17898 1.84496 1.52317 1.45360 1.09833 1.04991 1.74229 1.21888 0.99376 0.79792 0.98135 0.89713 1.23580 0.98179 1.00405 0.96635 1.22575 0.95865 0.96650 0.95755 0.89120 1.20408 0.95730 0.94207 0.95378 1.22047 0.97659 0.98748 1.02145 1.21851 1.00963 1.01637 0.95454 1.21835 0.97325 1.01018 0.99537 1.23408 0.97284 0.99304 0.96926 1.22779 0.96466 0.93519 1.03745 1.21503 0.82259 0.94898 1.08362 1.23989 0.91652 1.08224 0.90771 1.86518 1.46706 1.65447 1.37976 0.93669 0.79886 0.72150 0.87609 1.83659 1.16815 1.35209 1.71593 0.87666 0.88612 0.88557 0.75187 0.88234 0.92614 0.92523 0.92758 0.91730 0.92733 0.92743 0.93123 0.92137 0.92897 0.92641 0.90074 0.87615 0.80379 0.84997 0.74133 1.18675 1.24040 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.20 9.88 71.24 0.70 0.51 16 2 C 0.09 0.52 7.37 25.26 0.19 0.71 16 3 C -0.27 -1.72 6.31 -18.99 -0.12 -1.84 16 4 C 0.59 4.82 7.81 86.65 0.68 5.50 16 5 O -0.57 -8.17 14.45 -4.09 -0.06 -8.23 16 6 N -0.69 -1.45 5.26 -443.35 -2.33 -3.78 16 7 C 0.11 0.16 4.32 45.52 0.20 0.36 16 8 H 0.08 0.47 7.46 -2.39 -0.02 0.45 16 9 C -0.15 -0.06 7.04 31.12 0.22 0.16 16 10 C -0.09 0.25 2.91 -10.27 -0.03 0.22 16 11 H 0.09 -0.29 8.14 -2.39 -0.02 -0.31 16 12 C -0.06 0.14 0.68 -52.18 -0.04 0.11 16 13 C -0.15 0.35 7.53 71.98 0.54 0.89 16 14 C -0.14 0.17 8.42 71.98 0.61 0.78 16 15 C -0.14 0.42 8.33 71.98 0.60 1.02 16 16 C -0.13 0.43 6.46 31.12 0.20 0.63 16 17 C -0.15 -0.35 10.48 23.65 0.25 -0.10 16 18 C -0.02 -0.07 6.22 24.76 0.15 0.09 16 19 C -0.04 0.10 2.96 71.24 0.21 0.31 16 20 O -0.55 0.41 12.86 -148.98 -1.92 -1.51 16 21 Si 0.76 -1.57 32.09 68.60 2.20 0.63 16 22 O -0.18 -0.98 8.90 4.47 0.04 -0.94 16 23 H 0.11 -0.04 8.14 -2.39 -0.02 -0.06 16 24 H 0.10 -0.10 8.14 -2.38 -0.02 -0.12 16 25 H 0.10 0.55 6.50 -2.39 -0.02 0.53 16 26 H 0.41 -1.10 7.87 -92.71 -0.73 -1.83 16 27 H 0.10 -0.01 5.72 -2.39 -0.01 -0.02 16 28 H 0.06 0.18 8.14 -2.38 -0.02 0.16 16 29 H 0.06 -0.09 6.43 -2.39 -0.02 -0.11 16 30 H 0.05 -0.10 8.14 -2.38 -0.02 -0.12 16 31 H 0.06 -0.21 6.00 -2.39 -0.01 -0.23 16 32 H 0.05 -0.07 8.14 -2.39 -0.02 -0.09 16 33 H 0.05 -0.05 8.14 -2.39 -0.02 -0.07 16 34 H 0.05 -0.01 8.05 -2.39 -0.02 -0.03 16 35 H 0.06 -0.22 7.61 -2.39 -0.02 -0.24 16 36 H 0.05 -0.12 8.14 -2.39 -0.02 -0.14 16 37 H 0.05 -0.17 8.14 -2.39 -0.02 -0.19 16 38 H 0.08 -0.37 8.14 -2.39 -0.02 -0.39 16 39 H 0.11 -0.44 6.02 -2.39 -0.01 -0.45 16 40 H 0.18 -0.57 7.74 -2.91 -0.02 -0.59 16 41 H 0.13 -1.25 7.96 -2.39 -0.02 -1.27 16 42 H 0.41 -3.98 8.74 -74.05 -0.65 -4.63 16 43 H -0.26 0.15 7.11 99.48 0.71 0.86 16 44 H -0.31 -2.58 7.11 99.48 0.71 -1.88 16 Total: 0.00 -17.18 352.02 1.97 -15.21 By element: Atomic # 1 Polarization: -10.41 SS G_CDS: -0.33 Total: -10.74 kcal Atomic # 6 Polarization: 4.99 SS G_CDS: 4.36 Total: 9.35 kcal Atomic # 7 Polarization: -1.45 SS G_CDS: -2.33 Total: -3.78 kcal Atomic # 8 Polarization: -8.74 SS G_CDS: -1.93 Total: -10.67 kcal Atomic # 14 Polarization: -1.57 SS G_CDS: 2.20 Total: 0.63 kcal Total: -17.18 1.97 -15.21 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664192_13308374.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -17.324 kcal (2) G-P(sol) polarization free energy of solvation -17.181 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -34.505 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.967 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.213 kcal (6) G-S(sol) free energy of system = (1) + (5) -32.537 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds