Wall clock time and date at job start Sun Mar 7 2021 13:40:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.52996 * 109.47407 * 2 1 4 4 C 1.53000 * 109.47107 * 119.99735 * 2 1 3 5 5 C 1.53004 * 109.47297 * 239.99375 * 2 1 3 6 6 H 1.08999 * 112.85062 * 187.46668 * 5 2 1 7 7 C 1.53776 * 113.61584 * 318.66946 * 5 2 1 8 8 C 1.53953 * 87.02087 * 139.94690 * 7 5 2 9 9 H 1.09001 * 113.74742 * 220.05431 * 8 7 5 10 10 N 1.46502 * 113.53846 * 89.18551 * 8 7 5 11 11 C 1.34777 * 120.00071 * 107.50175 * 10 8 7 12 12 O 1.21593 * 119.99742 * 0.02562 * 11 10 8 13 13 C 1.47559 * 120.00201 * 180.02562 * 11 10 8 14 14 C 1.39829 * 120.00219 * 359.72638 * 13 11 10 15 15 C 1.36561 * 120.00101 * 179.78329 * 14 13 11 16 16 C 1.39818 * 119.99728 * 0.47162 * 15 14 13 17 17 C 1.47568 * 119.99906 * 179.75918 * 16 15 14 18 18 C 1.34974 * 125.27210 * 0.02784 * 17 16 15 19 19 C 1.37804 * 114.70109 * 179.97438 * 18 17 16 20 20 C 1.33735 * 115.07883 * 359.97438 * 19 18 17 21 21 C 1.50702 * 125.12039 * 180.02562 * 20 19 18 22 22 O 1.42903 * 109.47066 * 299.99974 * 21 20 19 23 23 Si 1.86298 * 109.47341 * 179.97438 * 21 20 19 24 24 S 1.75862 * 109.76306 * 359.77161 * 20 19 18 25 25 C 1.39827 * 120.00594 * 359.78315 * 16 15 14 26 26 C 1.36555 * 119.99775 * 359.97438 * 25 16 15 27 27 C 1.53781 * 113.61051 * 56.27876 * 5 2 1 28 28 H 1.09001 * 109.46571 * 66.49973 * 1 2 3 29 29 H 1.08999 * 109.47045 * 306.50197 * 1 2 3 30 30 H 1.08998 * 109.47159 * 186.49883 * 1 2 3 31 31 H 1.09000 * 109.47349 * 59.99591 * 3 2 1 32 32 H 1.09001 * 109.47068 * 179.97438 * 3 2 1 33 33 H 1.09000 * 109.47115 * 299.99525 * 3 2 1 34 34 H 1.09007 * 109.46878 * 60.00015 * 4 2 1 35 35 H 1.09001 * 109.47392 * 179.97438 * 4 2 1 36 36 H 1.09002 * 109.47448 * 300.00462 * 4 2 1 37 37 H 1.08996 * 113.61584 * 254.52360 * 7 5 2 38 38 H 1.08999 * 113.61397 * 25.42930 * 7 5 2 39 39 H 0.97000 * 120.00102 * 287.50916 * 10 8 7 40 40 H 1.08002 * 119.99650 * 0.02902 * 14 13 11 41 41 H 1.07994 * 119.99891 * 180.23550 * 15 14 13 42 42 H 1.08002 * 122.65313 * 359.93544 * 18 17 16 43 43 H 1.08000 * 122.45829 * 179.97438 * 19 18 17 44 44 H 1.09001 * 109.46948 * 59.99516 * 21 20 19 45 45 H 0.96711 * 113.99372 * 300.00145 * 22 21 20 46 46 H 1.48509 * 110.00053 * 58.67779 * 23 21 20 47 47 H 1.48497 * 109.99994 * 179.97438 * 23 21 20 48 48 H 1.08002 * 119.99937 * 180.02562 * 25 16 15 49 49 H 1.07999 * 120.00016 * 180.02562 * 26 25 16 50 50 H 1.09002 * 113.61394 * 334.55888 * 27 5 2 51 51 H 1.08999 * 113.62131 * 105.46760 * 27 5 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 6 2.0400 -0.7212 1.2493 5 6 2.0400 -0.7214 -1.2492 6 1 3.1201 -0.8680 -1.2420 7 6 1.2479 -1.9940 -1.5922 8 6 1.3664 -1.5731 -3.0684 9 1 0.4599 -1.7466 -3.6484 10 7 2.5702 -2.0849 -3.7279 11 6 2.4717 -3.0769 -4.6349 12 8 1.3835 -3.5467 -4.9062 13 6 3.6843 -3.5928 -5.2988 14 6 4.9351 -3.0487 -4.9911 15 6 6.0578 -3.5291 -5.6023 16 6 5.9555 -4.5585 -6.5429 17 6 7.1682 -5.0741 -7.2073 18 6 8.4246 -4.6323 -6.9881 19 6 9.3965 -5.2698 -7.7284 20 6 8.9482 -6.2266 -8.5482 21 6 9.8109 -7.0642 -9.4567 22 8 10.5017 -6.2141 -10.3746 23 14 8.7396 -8.2595 -10.4022 24 16 7.2013 -6.3652 -8.4012 25 6 4.7042 -5.0991 -6.8546 26 6 3.5821 -4.6220 -6.2399 27 6 1.5079 -0.1273 -2.5640 28 1 -0.3632 0.4098 -0.9425 29 1 -0.3633 0.6113 0.8261 30 1 -0.3633 -1.0210 0.1163 31 1 1.6767 1.9563 0.8899 32 1 3.1301 1.4424 0.0005 33 1 1.6768 1.9563 -0.8900 34 1 1.6766 -1.7489 1.2493 35 1 3.1300 -0.7216 1.2491 36 1 1.6766 -0.2074 2.1393 37 1 1.7792 -2.9160 -1.3562 38 1 0.2247 -1.9859 -1.2167 39 1 3.4383 -1.7100 -3.5117 40 1 5.0136 -2.2511 -4.2672 41 1 7.0242 -3.1114 -5.3618 42 1 8.6504 -3.8412 -6.2884 43 1 10.4433 -5.0155 -7.6520 44 1 10.5350 -7.6191 -8.8602 45 1 9.9183 -5.6888 -10.9393 46 1 7.7270 -7.5167 -11.1949 47 1 9.5785 -9.0910 -11.3023 48 1 4.6254 -5.8945 -7.5810 49 1 2.6156 -5.0399 -6.4803 50 1 0.5558 0.3920 -2.4546 51 1 2.2487 0.4556 -3.1113 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664192_13308390.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 13:40:27 Heat of formation + Delta-G solvation = 7.972398 kcal Electronic energy + Delta-G solvation = -29989.071816 eV Core-core repulsion = 25946.859922 eV Total energy + Delta-G solvation = -4042.211894 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.155 amu Computer time = 1.39 seconds Orbital eigenvalues (eV) -41.76161 -40.78569 -39.66525 -38.98492 -37.50335 -36.54508 -34.17301 -33.16309 -32.19611 -30.48329 -28.55864 -28.29736 -27.44664 -26.32212 -25.97752 -24.66503 -23.97949 -23.44081 -21.85811 -21.19932 -20.32631 -19.25415 -19.13151 -18.63049 -17.71185 -17.12192 -16.71924 -16.50371 -16.36793 -16.24127 -16.21120 -15.93575 -15.58710 -15.48256 -15.17515 -15.01368 -14.65543 -14.48449 -14.37430 -14.15625 -13.88613 -13.82636 -13.66255 -13.58013 -13.38642 -13.19262 -13.11470 -12.81030 -12.76887 -12.56911 -12.49774 -12.36133 -12.15962 -12.08112 -11.93392 -11.55799 -11.41634 -11.17895 -10.94379 -10.91393 -10.88835 -10.65974 -10.23638 -10.04028 -9.59074 -9.06200 -5.13225 -0.91201 0.23231 0.30111 0.34828 0.71601 1.15721 1.50834 1.55078 1.84422 1.99758 2.05478 2.82494 3.20986 3.37701 3.46197 3.48614 3.58717 3.64198 3.66925 3.70674 3.77033 3.83602 3.99079 4.12768 4.19612 4.21019 4.24908 4.32225 4.43448 4.47347 4.48684 4.55970 4.63903 4.69274 4.70287 4.73277 4.80651 4.84897 4.87632 4.92880 4.94483 4.96696 5.05313 5.05469 5.07521 5.12245 5.17192 5.20551 5.23544 5.27279 5.32240 5.41167 5.41339 5.42154 5.63020 5.69844 6.24232 6.45224 7.19556 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C -0.060 4.060 3 C -0.141 4.141 4 C -0.141 4.141 5 C -0.099 4.099 6 H 0.087 0.913 7 C -0.151 4.151 8 C 0.118 3.882 9 H 0.104 0.896 10 N -0.709 5.709 11 C 0.561 3.439 12 O -0.532 6.532 13 C -0.136 4.136 14 C -0.078 4.078 15 C -0.110 4.110 16 C 0.013 3.987 17 C -0.148 4.148 18 C -0.119 4.119 19 C -0.104 4.104 20 C -0.217 4.217 21 C -0.033 4.033 22 O -0.523 6.523 23 Si 0.649 3.351 24 S 0.134 5.866 25 C -0.120 4.120 26 C -0.049 4.049 27 C -0.144 4.144 28 H 0.059 0.941 29 H 0.055 0.945 30 H 0.059 0.941 31 H 0.054 0.946 32 H 0.053 0.947 33 H 0.055 0.945 34 H 0.055 0.945 35 H 0.053 0.947 36 H 0.054 0.946 37 H 0.069 0.931 38 H 0.098 0.902 39 H 0.400 0.600 40 H 0.129 0.871 41 H 0.134 0.866 42 H 0.145 0.855 43 H 0.146 0.854 44 H 0.128 0.872 45 H 0.378 0.622 46 H -0.240 1.240 47 H -0.234 1.234 48 H 0.131 0.869 49 H 0.142 0.858 50 H 0.100 0.900 51 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.793 1.469 2.696 3.555 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.060 4.060 3 C -0.198 4.198 4 C -0.198 4.198 5 C -0.117 4.117 6 H 0.105 0.895 7 C -0.189 4.189 8 C 0.013 3.987 9 H 0.122 0.878 10 N -0.360 5.360 11 C 0.349 3.651 12 O -0.409 6.409 13 C -0.139 4.139 14 C -0.097 4.097 15 C -0.129 4.129 16 C 0.011 3.989 17 C -0.265 4.265 18 C -0.150 4.150 19 C -0.134 4.134 20 C -0.335 4.335 21 C -0.145 4.145 22 O -0.330 6.330 23 Si 0.547 3.453 24 S 0.402 5.598 25 C -0.139 4.139 26 C -0.067 4.067 27 C -0.182 4.182 28 H 0.077 0.923 29 H 0.074 0.926 30 H 0.078 0.922 31 H 0.073 0.927 32 H 0.072 0.928 33 H 0.075 0.925 34 H 0.074 0.926 35 H 0.072 0.928 36 H 0.073 0.927 37 H 0.088 0.912 38 H 0.116 0.884 39 H 0.235 0.765 40 H 0.147 0.853 41 H 0.152 0.848 42 H 0.162 0.838 43 H 0.163 0.837 44 H 0.146 0.854 45 H 0.226 0.774 46 H -0.164 1.164 47 H -0.157 1.157 48 H 0.149 0.851 49 H 0.160 0.840 50 H 0.118 0.882 51 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges 0.160 -0.357 1.275 1.334 hybrid contribution 1.821 2.173 0.373 2.860 sum 1.981 1.816 1.648 3.153 Atomic orbital electron populations 1.22038 0.94576 1.01960 1.01943 1.20432 0.95629 0.95321 0.94575 1.21848 1.00906 0.95256 1.01825 1.21849 1.00855 1.00287 0.96852 1.22642 0.99446 0.95904 0.93718 0.89501 1.23630 1.01925 0.97917 0.95454 1.21900 0.88861 0.94501 0.93423 0.87845 1.45587 1.10235 1.37870 1.42309 1.18207 0.88738 0.79321 0.78798 1.90809 1.28401 1.58227 1.63469 1.20008 0.93040 1.00049 1.00826 1.20953 0.91526 0.98653 0.98570 1.20863 0.99155 0.96499 0.96431 1.18295 0.90596 0.95092 0.94935 1.23091 0.96288 1.02888 1.04220 1.20389 0.90762 1.02074 1.01768 1.20001 1.01262 0.96208 0.95962 1.25038 0.96810 1.05302 1.06328 1.24375 1.00170 0.96623 0.93342 1.86631 1.36006 1.58513 1.51843 0.95227 0.81060 0.82871 0.86134 1.84170 1.03095 1.34274 1.38308 1.20978 0.91332 1.00712 1.00840 1.20948 0.99444 0.93558 0.92790 1.23458 1.02832 0.95476 0.96410 0.92252 0.92622 0.92201 0.92670 0.92774 0.92546 0.92599 0.92784 0.92653 0.91186 0.88369 0.76457 0.85292 0.84824 0.83771 0.83659 0.85438 0.77394 1.16383 1.15710 0.85124 0.84036 0.88203 0.90955 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.22 7.49 37.16 0.28 0.50 16 2 C -0.06 0.10 0.68 -154.51 -0.11 -0.01 16 3 C -0.14 0.22 8.31 37.16 0.31 0.53 16 4 C -0.14 0.17 8.43 37.16 0.31 0.48 16 5 C -0.10 0.19 2.91 -89.81 -0.26 -0.07 16 6 H 0.09 -0.19 8.14 -51.93 -0.42 -0.61 16 7 C -0.15 0.12 7.09 -25.83 -0.18 -0.07 16 8 C 0.12 -0.02 4.33 -67.03 -0.29 -0.31 16 9 H 0.10 0.18 7.46 -51.93 -0.39 -0.21 16 10 N -0.71 0.20 5.21 -53.96 -0.28 -0.09 16 11 C 0.56 1.42 7.76 -12.46 -0.10 1.33 16 12 O -0.53 -3.35 15.93 5.28 0.08 -3.27 16 13 C -0.14 -0.15 5.88 -104.90 -0.62 -0.76 16 14 C -0.08 0.09 9.48 -39.59 -0.38 -0.29 16 15 C -0.11 0.10 9.48 -39.60 -0.38 -0.27 16 16 C 0.01 0.00 5.88 -104.91 -0.62 -0.61 16 17 C -0.15 -0.05 6.37 -36.94 -0.24 -0.28 16 18 C -0.12 0.05 9.64 -40.90 -0.39 -0.35 16 19 C -0.10 0.02 10.00 -41.32 -0.41 -0.40 16 20 C -0.22 0.04 5.73 -35.89 -0.21 -0.16 16 21 C -0.03 0.02 2.96 36.01 0.11 0.13 16 22 O -0.52 -0.32 12.86 -35.23 -0.45 -0.77 16 23 Si 0.65 -0.62 30.96 -169.99 -5.26 -5.88 16 24 S 0.13 -0.03 19.46 -107.50 -2.09 -2.12 16 25 C -0.12 -0.06 9.54 -39.60 -0.38 -0.44 16 26 C -0.05 -0.07 9.53 -39.59 -0.38 -0.44 16 27 C -0.14 0.27 6.41 -25.92 -0.17 0.11 16 28 H 0.06 -0.10 6.05 -51.93 -0.31 -0.41 16 29 H 0.05 -0.06 8.14 -51.93 -0.42 -0.49 16 30 H 0.06 -0.08 6.46 -51.93 -0.34 -0.41 16 31 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 32 H 0.05 -0.08 8.14 -51.93 -0.42 -0.51 16 33 H 0.06 -0.09 7.57 -51.93 -0.39 -0.48 16 34 H 0.05 -0.05 8.10 -51.92 -0.42 -0.47 16 35 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 36 H 0.05 -0.05 8.14 -51.93 -0.42 -0.48 16 37 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 38 H 0.10 -0.09 5.69 -51.93 -0.30 -0.38 16 39 H 0.40 -1.11 6.71 -40.82 -0.27 -1.39 16 40 H 0.13 -0.51 6.38 -52.49 -0.34 -0.84 16 41 H 0.13 -0.40 6.74 -52.49 -0.35 -0.76 16 42 H 0.14 -0.33 6.88 -52.49 -0.36 -0.69 16 43 H 0.15 -0.14 8.06 -52.49 -0.42 -0.56 16 44 H 0.13 -0.21 7.96 -51.93 -0.41 -0.62 16 45 H 0.38 -0.79 8.70 45.56 0.40 -0.39 16 46 H -0.24 -0.22 7.11 56.52 0.40 0.19 16 47 H -0.23 -0.40 7.11 56.52 0.40 0.00 16 48 H 0.13 -0.09 7.26 -52.49 -0.38 -0.47 16 49 H 0.14 0.20 7.64 -52.49 -0.40 -0.20 16 50 H 0.10 -0.21 6.09 -51.93 -0.32 -0.52 16 51 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 LS Contribution 415.40 15.07 6.26 6.26 Total: 0.00 -6.54 415.40 -13.41 -19.95 By element: Atomic # 1 Polarization: -5.10 SS G_CDS: -7.59 Total: -12.69 kcal Atomic # 6 Polarization: 2.69 SS G_CDS: -4.08 Total: -1.39 kcal Atomic # 7 Polarization: 0.20 SS G_CDS: -0.28 Total: -0.09 kcal Atomic # 8 Polarization: -3.67 SS G_CDS: -0.37 Total: -4.04 kcal Atomic # 14 Polarization: -0.62 SS G_CDS: -5.26 Total: -5.88 kcal Atomic # 16 Polarization: -0.03 SS G_CDS: -2.09 Total: -2.12 kcal Total LS contribution 6.26 Total: 6.26 kcal Total: -6.54 -13.41 -19.95 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664192_13308390.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 27.922 kcal (2) G-P(sol) polarization free energy of solvation -6.536 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 21.386 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.414 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.949 kcal (6) G-S(sol) free energy of system = (1) + (5) 7.972 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.39 seconds