Wall clock time and date at job start Sun Mar 7 2021 13:40:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 C 1.52998 * 109.47234 * 2 1 4 4 C 1.53004 * 109.46938 * 119.99524 * 2 1 3 5 5 C 1.53001 * 109.47639 * 239.99756 * 2 1 3 6 6 H 1.09001 * 112.84494 * 292.52400 * 5 2 1 7 7 C 1.53776 * 113.61073 * 63.71378 * 5 2 1 8 8 C 1.53789 * 87.07890 * 139.98768 * 7 5 2 9 9 H 1.09003 * 113.61350 * 220.02512 * 8 7 5 10 10 N 1.46493 * 113.61479 * 89.20064 * 8 7 5 11 11 C 1.34778 * 119.99867 * 155.00235 * 10 8 7 12 12 O 1.21587 * 120.00225 * 0.02562 * 11 10 8 13 13 C 1.47538 * 119.99865 * 179.97438 * 11 10 8 14 14 C 1.40137 * 120.18659 * 179.72310 * 13 11 10 15 15 O 1.35648 * 120.15620 * 0.02562 * 14 13 11 16 16 C 1.38712 * 119.69332 * 179.77587 * 14 13 11 17 17 C 1.38052 * 120.08623 * 0.50176 * 16 14 13 18 18 C 1.50705 * 119.80575 * 179.72372 * 17 16 14 19 19 O 1.42901 * 109.46997 * 65.02300 * 18 17 16 20 20 Si 1.86299 * 109.47155 * 185.02520 * 18 17 16 21 21 C 1.38550 * 120.38859 * 359.75135 * 17 16 14 22 22 C 1.37778 * 120.30318 * 359.97438 * 21 17 16 23 23 C 1.53778 * 113.61729 * 161.21425 * 5 2 1 24 24 H 1.08993 * 109.47327 * 179.97438 * 1 2 3 25 25 H 1.09000 * 109.47197 * 60.00247 * 1 2 3 26 26 H 1.09001 * 109.47516 * 300.00256 * 1 2 3 27 27 H 1.08997 * 109.47510 * 53.48571 * 3 2 1 28 28 H 1.09002 * 109.47666 * 173.48706 * 3 2 1 29 29 H 1.08997 * 109.47019 * 293.48686 * 3 2 1 30 30 H 1.09004 * 109.47004 * 60.00031 * 4 2 1 31 31 H 1.08999 * 109.47092 * 179.97438 * 4 2 1 32 32 H 1.09001 * 109.47197 * 300.00416 * 4 2 1 33 33 H 1.08998 * 113.61851 * 254.53131 * 7 5 2 34 34 H 1.08994 * 113.61725 * 25.35717 * 7 5 2 35 35 H 0.96997 * 120.00240 * 334.99459 * 10 8 7 36 36 H 0.96696 * 114.00090 * 89.99758 * 15 14 13 37 37 H 1.08003 * 119.95702 * 180.22816 * 16 14 13 38 38 H 1.09004 * 109.46774 * 305.02716 * 18 17 16 39 39 H 0.96702 * 113.99821 * 60.00369 * 19 18 17 40 40 H 1.48506 * 110.00068 * 58.68132 * 20 18 17 41 41 H 1.48500 * 110.00120 * 180.02562 * 20 18 17 42 42 H 1.07998 * 119.84350 * 180.02562 * 21 17 16 43 43 H 1.07999 * 120.04849 * 179.97438 * 22 21 17 44 44 H 1.09000 * 113.61433 * 334.56919 * 23 5 2 45 45 H 1.09004 * 113.61326 * 105.46700 * 23 5 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0399 -0.7212 1.2493 5 6 2.0401 -0.7213 -1.2492 6 1 1.8184 -1.7885 -1.2418 7 6 1.6571 -0.0216 -2.5639 8 6 3.0675 -0.3701 -3.0685 9 1 3.5336 0.4273 -3.6472 10 7 3.1485 -1.6749 -3.7296 11 6 4.1167 -1.9118 -4.6367 12 8 4.9232 -1.0427 -4.9061 13 6 4.1986 -3.2260 -5.3021 14 6 5.2002 -3.4746 -6.2502 15 8 6.0999 -2.5080 -6.5605 16 6 5.2705 -4.7155 -6.8661 17 6 4.3511 -5.6966 -6.5532 18 6 4.4296 -7.0404 -7.2308 19 8 5.6423 -7.6947 -6.8521 20 14 2.9743 -8.0824 -6.7142 21 6 3.3562 -5.4528 -5.6203 22 6 3.2748 -4.2280 -4.9947 23 6 3.5031 -0.3964 -1.5939 24 1 -0.3633 -1.0276 -0.0005 25 1 -0.3633 0.5138 -0.8900 26 1 -0.3634 0.5139 0.8899 27 1 1.5846 1.9889 0.8259 28 1 3.1237 1.4448 0.1166 29 1 1.7750 1.9215 -0.9425 30 1 1.6765 -1.7489 1.2494 31 1 3.1299 -0.7216 1.2491 32 1 1.6765 -0.2073 2.1393 33 1 0.8607 -0.5260 -3.1111 34 1 1.4833 1.0488 -2.4544 35 1 2.5054 -2.3684 -3.5144 36 1 6.8947 -2.5191 -6.0099 37 1 6.0430 -4.9130 -7.5947 38 1 4.4130 -6.9036 -8.3121 39 1 5.7254 -7.8493 -5.9011 40 1 1.7064 -7.3981 -7.0739 41 1 3.0404 -9.4106 -7.3751 42 1 2.6417 -6.2268 -5.3818 43 1 2.4973 -4.0423 -4.2684 44 1 3.8353 0.5719 -1.2194 45 1 4.1969 -1.2033 -1.3578 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664192_13422076.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 13:40:30 Heat of formation + Delta-G solvation = -63.073230 kcal Electronic energy + Delta-G solvation = -25439.501717 eV Core-core repulsion = 21810.354415 eV Total energy + Delta-G solvation = -3629.147302 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 306.166 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -41.86933 -41.07180 -39.51559 -38.39898 -37.17724 -36.47715 -34.00551 -32.37292 -31.13865 -28.56539 -28.30891 -27.71771 -26.32364 -25.87842 -23.97161 -23.55582 -21.80372 -21.18756 -19.43479 -19.13852 -18.70839 -18.21501 -17.25866 -16.81597 -16.64601 -16.40713 -16.16206 -15.88065 -15.77300 -15.59757 -15.25375 -15.05068 -14.91593 -14.51326 -14.20279 -13.89049 -13.88176 -13.56411 -13.36503 -13.16881 -12.98575 -12.80617 -12.77169 -12.50455 -12.33739 -12.19585 -12.09871 -11.93700 -11.69569 -11.41194 -11.17987 -10.92558 -10.81775 -10.55469 -10.17751 -10.00751 -9.80772 -5.15199 -0.43066 0.07403 1.14711 1.52760 1.75650 1.87902 2.04127 2.56353 3.07221 3.34335 3.39318 3.46902 3.48571 3.58504 3.67696 3.70391 3.82456 3.95739 3.98591 4.16489 4.20194 4.20364 4.29629 4.46696 4.53092 4.63603 4.66229 4.68899 4.69925 4.72589 4.80686 4.86906 4.91844 4.93348 4.95457 5.04747 5.06262 5.08880 5.12235 5.16703 5.19608 5.31575 5.40440 5.41181 5.50050 5.64573 6.42860 6.46158 6.69652 7.23064 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.141 4.141 2 C -0.059 4.059 3 C -0.149 4.149 4 C -0.141 4.141 5 C -0.099 4.099 6 H 0.087 0.913 7 C -0.144 4.144 8 C 0.120 3.880 9 H 0.103 0.897 10 N -0.710 5.710 11 C 0.561 3.439 12 O -0.516 6.516 13 C -0.164 4.164 14 C 0.173 3.827 15 O -0.476 6.476 16 C -0.129 4.129 17 C -0.076 4.076 18 C -0.074 4.074 19 O -0.536 6.536 20 Si 0.690 3.310 21 C -0.135 4.135 22 C -0.065 4.065 23 C -0.150 4.150 24 H 0.053 0.947 25 H 0.055 0.945 26 H 0.054 0.946 27 H 0.055 0.945 28 H 0.059 0.941 29 H 0.059 0.941 30 H 0.053 0.947 31 H 0.055 0.945 32 H 0.054 0.946 33 H 0.071 0.929 34 H 0.099 0.901 35 H 0.398 0.602 36 H 0.398 0.602 37 H 0.140 0.860 38 H 0.118 0.882 39 H 0.380 0.620 40 H -0.255 1.255 41 H -0.252 1.252 42 H 0.136 0.864 43 H 0.134 0.866 44 H 0.098 0.902 45 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.786 -2.823 5.254 6.583 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.199 4.199 2 C -0.059 4.059 3 C -0.206 4.206 4 C -0.198 4.198 5 C -0.117 4.117 6 H 0.105 0.895 7 C -0.182 4.182 8 C 0.014 3.986 9 H 0.121 0.879 10 N -0.362 5.362 11 C 0.348 3.652 12 O -0.392 6.392 13 C -0.168 4.168 14 C 0.127 3.873 15 O -0.288 6.288 16 C -0.148 4.148 17 C -0.077 4.077 18 C -0.185 4.185 19 O -0.342 6.342 20 Si 0.591 3.409 21 C -0.152 4.152 22 C -0.084 4.084 23 C -0.189 4.189 24 H 0.072 0.928 25 H 0.074 0.926 26 H 0.073 0.927 27 H 0.074 0.926 28 H 0.078 0.922 29 H 0.077 0.923 30 H 0.072 0.928 31 H 0.074 0.926 32 H 0.073 0.927 33 H 0.090 0.910 34 H 0.118 0.882 35 H 0.234 0.766 36 H 0.257 0.743 37 H 0.158 0.842 38 H 0.135 0.865 39 H 0.228 0.772 40 H -0.180 1.180 41 H -0.177 1.177 42 H 0.153 0.847 43 H 0.151 0.849 44 H 0.116 0.884 45 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges -3.207 -2.424 3.722 5.479 hybrid contribution 0.202 -0.028 0.054 0.211 sum -3.005 -2.452 3.776 5.413 Atomic orbital electron populations 1.21850 0.94442 1.01742 1.01834 1.20429 0.95518 0.95410 0.94577 1.22041 1.01203 0.95354 1.01954 1.21850 1.01079 1.00060 0.96859 1.22641 0.95985 0.99361 0.93699 0.89469 1.23460 0.96067 1.02282 0.96410 1.21834 0.97637 0.85731 0.93363 0.87926 1.45579 1.32549 1.15690 1.42428 1.18037 0.81204 0.87067 0.78893 1.90835 1.39982 1.45696 1.62679 1.20425 1.00432 0.95201 1.00707 1.18513 0.90376 0.87129 0.91304 1.84759 1.32201 1.51295 1.60500 1.21355 1.00611 0.91181 1.01607 1.20445 0.94662 0.96466 0.96136 1.25190 0.97932 0.93091 1.02253 1.86542 1.38797 1.79316 1.29507 0.94782 0.75665 0.79385 0.91021 1.20921 0.98943 0.97524 0.97810 1.21141 0.96947 0.92146 0.98146 1.23598 0.96575 1.03196 0.95500 0.92755 0.92554 0.92663 0.92622 0.92205 0.92253 0.92767 0.92601 0.92656 0.90991 0.88241 0.76597 0.74304 0.84198 0.86474 0.77245 1.18022 1.17729 0.84675 0.84865 0.88398 0.91245 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 0.24 8.31 37.16 0.31 0.55 16 2 C -0.06 0.11 0.68 -154.51 -0.11 0.00 16 3 C -0.15 0.23 7.48 37.16 0.28 0.51 16 4 C -0.14 0.21 8.43 37.16 0.31 0.52 16 5 C -0.10 0.21 2.92 -89.81 -0.26 -0.05 16 6 H 0.09 -0.22 8.14 -51.93 -0.42 -0.65 16 7 C -0.14 0.28 6.40 -25.92 -0.17 0.11 16 8 C 0.12 -0.03 4.32 -67.12 -0.29 -0.32 16 9 H 0.10 0.19 7.46 -51.93 -0.39 -0.20 16 10 N -0.71 0.30 5.22 -54.05 -0.28 0.02 16 11 C 0.56 1.44 7.76 -12.47 -0.10 1.35 16 12 O -0.52 -3.27 14.76 -16.59 -0.24 -3.51 16 13 C -0.16 -0.18 5.89 -104.84 -0.62 -0.80 16 14 C 0.17 0.33 6.72 -38.69 -0.26 0.07 16 15 O -0.48 -1.41 11.58 -40.52 -0.47 -1.88 16 16 C -0.13 -0.08 9.60 -39.47 -0.38 -0.46 16 17 C -0.08 0.06 5.35 -104.57 -0.56 -0.50 16 18 C -0.07 0.09 2.79 36.01 0.10 0.19 16 19 O -0.54 0.43 12.83 -35.23 -0.45 -0.02 16 20 Si 0.69 -1.55 29.78 -169.99 -5.06 -6.61 16 21 C -0.13 0.28 8.64 -39.63 -0.34 -0.06 16 22 C -0.07 0.11 9.53 -39.20 -0.37 -0.26 16 23 C -0.15 0.16 7.09 -25.92 -0.18 -0.02 16 24 H 0.05 -0.09 8.14 -51.93 -0.42 -0.52 16 25 H 0.06 -0.09 7.56 -51.93 -0.39 -0.49 16 26 H 0.05 -0.07 8.14 -51.93 -0.42 -0.50 16 27 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 28 H 0.06 -0.09 6.46 -51.93 -0.34 -0.42 16 29 H 0.06 -0.10 6.05 -51.93 -0.31 -0.42 16 30 H 0.05 -0.08 8.14 -51.93 -0.42 -0.51 16 31 H 0.05 -0.07 8.10 -51.93 -0.42 -0.49 16 32 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 33 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 34 H 0.10 -0.20 6.09 -51.93 -0.32 -0.51 16 35 H 0.40 -1.21 6.73 -40.82 -0.27 -1.49 16 36 H 0.40 -0.32 9.06 45.56 0.41 0.10 16 37 H 0.14 0.06 8.06 -52.48 -0.42 -0.36 16 38 H 0.12 -0.08 7.96 -51.93 -0.41 -0.49 16 39 H 0.38 -1.84 8.70 45.56 0.40 -1.45 16 40 H -0.26 -0.02 7.11 56.52 0.40 0.38 16 41 H -0.25 -0.32 7.11 56.52 0.40 0.09 16 42 H 0.14 -0.60 4.88 -52.49 -0.26 -0.85 16 43 H 0.13 -0.62 6.40 -52.49 -0.34 -0.96 16 44 H 0.10 -0.11 5.69 -51.93 -0.30 -0.40 16 45 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 LS Contribution 354.66 15.07 5.34 5.34 Total: 0.00 -8.22 354.66 -9.74 -17.95 By element: Atomic # 1 Polarization: -6.19 SS G_CDS: -5.94 Total: -12.12 kcal Atomic # 6 Polarization: 3.46 SS G_CDS: -2.63 Total: 0.83 kcal Atomic # 7 Polarization: 0.30 SS G_CDS: -0.28 Total: 0.02 kcal Atomic # 8 Polarization: -4.24 SS G_CDS: -1.17 Total: -5.41 kcal Atomic # 14 Polarization: -1.55 SS G_CDS: -5.06 Total: -6.61 kcal Total LS contribution 5.34 Total: 5.34 kcal Total: -8.22 -9.74 -17.95 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664192_13422076.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -45.121 kcal (2) G-P(sol) polarization free energy of solvation -8.216 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -53.337 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.736 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.952 kcal (6) G-S(sol) free energy of system = (1) + (5) -63.073 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds