Wall clock time and date at job start Sun Mar 7 2021 13:40:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.37785 * 119.84468 * 2 1 4 4 C 1.39710 * 119.90896 * 179.97438 * 3 2 1 5 5 C 1.47534 * 120.19581 * 179.97438 * 4 3 2 6 6 O 1.21585 * 119.99839 * 179.97438 * 5 4 3 7 7 N 1.34779 * 119.99783 * 359.72828 * 5 4 3 8 8 C 1.46497 * 119.99854 * 180.27408 * 7 5 4 9 9 H 1.08999 * 112.85027 * 25.32946 * 8 7 5 10 10 C 1.53784 * 113.61528 * 156.52424 * 8 7 5 11 11 C 1.53787 * 87.07792 * 89.11714 * 10 8 7 12 12 H 1.09002 * 113.61338 * 270.80095 * 11 10 8 13 13 C 1.53001 * 113.61603 * 139.98616 * 11 10 8 14 14 C 1.52999 * 109.47131 * 63.64814 * 13 11 10 15 15 C 1.52990 * 109.47088 * 183.65258 * 13 11 10 16 16 C 1.53002 * 109.46577 * 303.65155 * 13 11 10 17 17 C 1.53777 * 113.61379 * 254.13240 * 8 7 5 18 18 C 1.40136 * 119.61221 * 0.27382 * 4 3 2 19 19 O 1.35660 * 120.14991 * 179.72362 * 18 4 3 20 20 C 1.38714 * 119.70116 * 359.44676 * 18 4 3 21 21 C 1.50701 * 119.95927 * 180.27291 * 20 18 4 22 22 O 1.42902 * 109.47141 * 285.28361 * 21 20 18 23 23 Si 1.86296 * 109.47247 * 165.28082 * 21 20 18 24 24 C 1.38054 * 120.08361 * 0.55909 * 20 18 4 25 25 H 1.09005 * 109.46521 * 90.00921 * 1 2 3 26 26 H 1.09001 * 109.46863 * 209.99849 * 1 2 3 27 27 H 1.08994 * 109.47328 * 330.00587 * 1 2 3 28 28 H 1.08004 * 120.04798 * 359.97438 * 3 2 1 29 29 H 0.97001 * 119.99684 * 0.27037 * 7 5 4 30 30 H 1.08989 * 113.61741 * 203.66492 * 10 8 7 31 31 H 1.08999 * 113.61162 * 334.48853 * 10 8 7 32 32 H 1.08998 * 109.46982 * 60.00341 * 14 13 11 33 33 H 1.08999 * 109.46899 * 180.02562 * 14 13 11 34 34 H 1.08999 * 109.47257 * 300.00345 * 14 13 11 35 35 H 1.09001 * 109.47366 * 59.99874 * 15 13 11 36 36 H 1.09003 * 109.47318 * 179.97438 * 15 13 11 37 37 H 1.08998 * 109.47650 * 299.99755 * 15 13 11 38 38 H 1.09000 * 109.47044 * 53.49732 * 16 13 11 39 39 H 1.08998 * 109.47026 * 173.49934 * 16 13 11 40 40 H 1.09001 * 109.46968 * 293.49731 * 16 13 11 41 41 H 1.09002 * 113.61712 * 25.43735 * 17 8 7 42 42 H 1.09000 * 113.61496 * 156.33258 * 17 8 7 43 43 H 0.96698 * 114.00151 * 89.99493 * 19 18 4 44 44 H 1.09001 * 109.47059 * 45.28152 * 21 20 18 45 45 H 0.96695 * 113.99543 * 299.99782 * 22 21 20 46 46 H 1.48499 * 110.00102 * 58.67987 * 23 21 20 47 47 H 1.48498 * 110.00289 * 180.02562 * 23 21 20 48 48 H 1.07991 * 119.80655 * 179.74466 * 24 20 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1927 1.1951 0.0000 4 6 3.5898 1.1967 0.0005 5 6 4.3304 2.4727 0.0000 6 8 5.5463 2.4698 0.0009 7 7 3.6592 3.6414 -0.0066 8 6 4.3946 4.9084 -0.0132 9 1 5.3924 4.8164 -0.4421 10 6 3.5862 6.0869 -0.5812 11 6 3.0795 6.3272 0.8507 12 1 2.1719 5.7734 1.0914 13 6 2.9904 7.8070 1.2292 14 6 1.9588 8.5004 0.3371 15 6 2.5661 7.9342 2.6936 16 6 4.3575 8.4660 1.0352 17 6 4.3702 5.6419 1.3381 18 6 4.2836 -0.0209 -0.0047 19 8 5.6402 -0.0320 -0.0099 20 6 3.5771 -1.2146 0.0012 21 6 4.3174 -2.5272 0.0018 22 8 4.8556 -2.7711 -1.2993 23 14 3.1445 -3.9014 0.4563 24 6 2.1966 -1.2016 0.0006 25 1 -0.3632 -0.0002 -1.0278 26 1 -0.3633 -0.8900 0.5138 27 1 -0.3633 0.8900 0.5137 28 1 1.6510 2.1294 -0.0004 29 1 2.6892 3.6435 -0.0070 30 1 4.2062 6.8963 -0.9665 31 1 2.8041 5.7845 -1.2776 32 1 0.9849 8.0308 0.4753 33 1 1.8957 9.5547 0.6065 34 1 2.2611 8.4097 -0.7062 35 1 3.3011 7.4402 3.3291 36 1 2.5031 8.9884 2.9634 37 1 1.5922 7.4646 2.8318 38 1 4.7122 8.2757 0.0222 39 1 4.2684 9.5408 1.1930 40 1 5.0659 8.0510 1.7522 41 1 4.2197 4.9805 2.1913 42 1 5.2042 6.3298 1.4767 43 1 6.0369 -0.0371 0.8719 44 1 5.1285 -2.4866 0.7287 45 1 4.1888 -2.8199 -1.9979 46 1 2.0170 -3.9469 -0.5091 47 1 3.8625 -5.2013 0.4610 48 1 1.6511 -2.1336 0.0010 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664192_13422088.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 13:40:34 Heat of formation + Delta-G solvation = -66.772241 kcal Electronic energy + Delta-G solvation = -27714.836749 eV Core-core repulsion = 23929.991426 eV Total energy + Delta-G solvation = -3784.845322 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 320.182 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -41.89709 -41.14517 -39.51163 -38.01060 -37.68287 -36.46092 -34.02922 -33.11804 -32.33300 -28.55766 -28.29481 -27.69505 -26.84401 -26.40333 -26.29499 -24.68948 -22.12437 -21.58774 -21.14791 -19.59226 -19.13080 -18.40988 -17.94271 -17.38053 -16.79795 -16.73935 -16.43668 -16.03700 -15.82227 -15.78196 -15.56260 -15.18791 -14.92300 -14.83610 -14.65834 -14.37038 -14.18338 -13.87726 -13.66199 -13.53981 -13.43774 -13.22335 -13.07288 -12.82794 -12.76963 -12.59308 -12.49558 -12.24084 -12.09824 -11.92883 -11.78174 -11.68881 -11.40350 -11.17260 -10.91509 -10.86202 -10.47725 -10.19958 -9.96179 -9.54428 -5.03790 -0.34725 0.03811 1.19731 1.49591 1.77381 1.89856 2.07772 2.57968 3.17102 3.30762 3.45967 3.47767 3.49788 3.56642 3.64145 3.68660 3.83278 3.99343 4.03351 4.06978 4.20358 4.20983 4.25815 4.42191 4.47529 4.51774 4.55765 4.64372 4.67910 4.70199 4.70920 4.73322 4.82914 4.87690 4.89857 4.93224 4.94130 4.96706 5.05594 5.07731 5.12057 5.14671 5.21204 5.28793 5.32206 5.41135 5.42298 5.55492 5.66369 6.42067 6.48699 6.77186 7.26273 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.097 4.097 3 C -0.067 4.067 4 C -0.164 4.164 5 C 0.561 3.439 6 O -0.515 6.515 7 N -0.711 5.711 8 C 0.120 3.880 9 H 0.102 0.898 10 C -0.144 4.144 11 C -0.098 4.098 12 H 0.087 0.913 13 C -0.059 4.059 14 C -0.141 4.141 15 C -0.141 4.141 16 C -0.148 4.148 17 C -0.150 4.150 18 C 0.192 3.808 19 O -0.467 6.467 20 C -0.151 4.151 21 C -0.066 4.066 22 O -0.519 6.519 23 Si 0.689 3.311 24 C -0.081 4.081 25 H 0.074 0.926 26 H 0.072 0.928 27 H 0.071 0.929 28 H 0.130 0.870 29 H 0.398 0.602 30 H 0.099 0.901 31 H 0.071 0.929 32 H 0.053 0.947 33 H 0.054 0.946 34 H 0.055 0.945 35 H 0.055 0.945 36 H 0.054 0.946 37 H 0.053 0.947 38 H 0.059 0.941 39 H 0.055 0.945 40 H 0.059 0.941 41 H 0.069 0.931 42 H 0.098 0.902 43 H 0.394 0.606 44 H 0.116 0.884 45 H 0.374 0.626 46 H -0.259 1.259 47 H -0.255 1.255 48 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.615 1.553 3.221 7.520 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.097 4.097 3 C -0.086 4.086 4 C -0.168 4.168 5 C 0.349 3.651 6 O -0.391 6.391 7 N -0.363 5.363 8 C 0.015 3.985 9 H 0.120 0.880 10 C -0.182 4.182 11 C -0.117 4.117 12 H 0.105 0.895 13 C -0.059 4.059 14 C -0.199 4.199 15 C -0.198 4.198 16 C -0.205 4.205 17 C -0.189 4.189 18 C 0.144 3.856 19 O -0.278 6.278 20 C -0.152 4.152 21 C -0.175 4.175 22 O -0.325 6.325 23 Si 0.590 3.410 24 C -0.099 4.099 25 H 0.093 0.907 26 H 0.091 0.909 27 H 0.090 0.910 28 H 0.148 0.852 29 H 0.233 0.767 30 H 0.118 0.882 31 H 0.090 0.910 32 H 0.072 0.928 33 H 0.073 0.927 34 H 0.075 0.925 35 H 0.074 0.926 36 H 0.073 0.927 37 H 0.072 0.928 38 H 0.077 0.923 39 H 0.074 0.926 40 H 0.078 0.922 41 H 0.088 0.912 42 H 0.116 0.884 43 H 0.253 0.747 44 H 0.134 0.866 45 H 0.221 0.779 46 H -0.184 1.184 47 H -0.180 1.180 48 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -5.575 0.811 2.700 6.247 hybrid contribution -0.403 0.352 -0.715 0.893 sum -5.978 1.163 1.984 6.405 Atomic orbital electron populations 1.20838 0.90043 1.03543 1.02931 1.19785 0.96743 0.92262 1.00929 1.21125 0.92147 0.98270 0.97029 1.20390 0.93924 0.93475 1.08975 1.18020 0.87321 0.83256 0.76548 1.90837 1.12990 1.87204 1.48071 1.45586 1.09912 1.04982 1.75826 1.21828 0.96961 0.82211 0.97510 0.88008 1.23449 1.00108 0.97696 0.96913 1.22688 0.97833 0.95344 0.95803 0.89508 1.20427 0.95783 0.94085 0.95635 1.21850 0.98370 1.00187 0.99450 1.21845 1.01134 1.01708 0.95149 1.22041 0.96187 1.00371 1.01940 1.23640 0.98601 0.99222 0.97401 1.18228 0.83963 0.89657 0.93705 1.84808 1.14016 1.95863 1.33105 1.20653 0.93968 0.95749 1.04792 1.24911 1.05078 0.98837 0.88721 1.86683 1.36468 1.93235 1.16071 0.95126 0.77923 0.77662 0.90306 1.21169 0.92911 0.98545 0.97307 0.90736 0.90887 0.91002 0.85211 0.76652 0.88235 0.91004 0.92771 0.92662 0.92550 0.92601 0.92657 0.92784 0.92253 0.92623 0.92200 0.91249 0.88414 0.74718 0.86587 0.77923 1.18383 1.17962 0.84628 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.41 10.00 36.01 0.36 0.77 16 2 C -0.10 0.14 5.87 -104.67 -0.61 -0.48 16 3 C -0.07 0.07 9.18 -39.20 -0.36 -0.29 16 4 C -0.16 -0.27 5.89 -104.85 -0.62 -0.89 16 5 C 0.56 1.73 7.76 -12.47 -0.10 1.63 16 6 O -0.52 -3.51 14.78 -16.59 -0.25 -3.75 16 7 N -0.71 -0.05 5.21 -54.06 -0.28 -0.33 16 8 C 0.12 0.02 4.29 -67.12 -0.29 -0.27 16 9 H 0.10 0.23 7.50 -51.93 -0.39 -0.16 16 10 C -0.14 0.24 6.40 -25.91 -0.17 0.07 16 11 C -0.10 0.18 2.93 -89.66 -0.26 -0.08 16 12 H 0.09 -0.19 8.14 -51.93 -0.42 -0.61 16 13 C -0.06 0.09 0.68 -154.51 -0.11 -0.01 16 14 C -0.14 0.21 8.31 37.16 0.31 0.52 16 15 C -0.14 0.17 8.43 37.15 0.31 0.49 16 16 C -0.15 0.20 7.48 37.16 0.28 0.48 16 17 C -0.15 0.10 7.11 -25.78 -0.18 -0.08 16 18 C 0.19 0.46 6.69 -38.69 -0.26 0.20 16 19 O -0.47 -1.73 10.91 -40.56 -0.44 -2.17 16 20 C -0.15 -0.08 5.27 -104.51 -0.55 -0.63 16 21 C -0.07 -0.02 2.37 36.01 0.09 0.07 16 22 O -0.52 -1.32 12.88 -35.23 -0.45 -1.78 16 23 Si 0.69 -0.92 30.24 -169.99 -5.14 -6.06 16 24 C -0.08 0.08 8.30 -39.54 -0.33 -0.25 16 25 H 0.07 -0.27 8.14 -51.93 -0.42 -0.69 16 26 H 0.07 -0.30 8.08 -51.93 -0.42 -0.72 16 27 H 0.07 -0.31 8.08 -51.93 -0.42 -0.73 16 28 H 0.13 -0.47 6.40 -52.48 -0.34 -0.80 16 29 H 0.40 -0.97 6.73 -40.82 -0.27 -1.25 16 30 H 0.10 -0.18 6.09 -51.94 -0.32 -0.49 16 31 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 32 H 0.05 -0.08 8.14 -51.93 -0.42 -0.51 16 33 H 0.05 -0.06 8.14 -51.93 -0.42 -0.49 16 34 H 0.06 -0.08 7.56 -51.93 -0.39 -0.48 16 35 H 0.05 -0.05 8.11 -51.93 -0.42 -0.47 16 36 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 37 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 38 H 0.06 -0.09 6.05 -51.93 -0.31 -0.40 16 39 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 40 H 0.06 -0.07 6.46 -51.93 -0.34 -0.41 16 41 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 42 H 0.10 -0.07 5.70 -51.93 -0.30 -0.37 16 43 H 0.39 -0.01 9.06 45.56 0.41 0.41 16 44 H 0.12 -0.05 7.84 -51.93 -0.41 -0.45 16 45 H 0.37 -0.17 8.70 45.56 0.40 0.23 16 46 H -0.26 0.00 6.68 56.52 0.38 0.38 16 47 H -0.25 -0.55 7.11 56.52 0.40 -0.15 16 48 H 0.14 -0.33 4.83 -52.49 -0.25 -0.58 16 LS Contribution 375.27 15.07 5.66 5.66 Total: 0.00 -8.19 375.27 -10.19 -18.38 By element: Atomic # 1 Polarization: -4.38 SS G_CDS: -6.79 Total: -11.18 kcal Atomic # 6 Polarization: 3.72 SS G_CDS: -2.49 Total: 1.23 kcal Atomic # 7 Polarization: -0.05 SS G_CDS: -0.28 Total: -0.33 kcal Atomic # 8 Polarization: -6.56 SS G_CDS: -1.14 Total: -7.70 kcal Atomic # 14 Polarization: -0.92 SS G_CDS: -5.14 Total: -6.06 kcal Total LS contribution 5.66 Total: 5.66 kcal Total: -8.19 -10.19 -18.38 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664192_13422088.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -48.397 kcal (2) G-P(sol) polarization free energy of solvation -8.189 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -56.585 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.187 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.376 kcal (6) G-S(sol) free energy of system = (1) + (5) -66.772 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds