Wall clock time and date at job start Sun Mar 7 2021 07:37:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.53002 * 109.46874 * 2 1 4 4 C 1.52997 * 109.46995 * 240.00391 * 2 1 3 5 5 C 1.52991 * 109.47156 * 120.00343 * 2 1 3 6 6 H 1.09007 * 112.84726 * 292.45526 * 5 2 1 7 7 C 1.53781 * 113.61879 * 63.65093 * 5 2 1 8 8 C 1.53779 * 87.08066 * 139.98244 * 7 5 2 9 9 H 1.09006 * 113.61608 * 219.93754 * 8 7 5 10 10 N 1.46500 * 113.61506 * 89.12162 * 8 7 5 11 11 C 1.34777 * 119.99949 * 156.52989 * 10 8 7 12 12 O 1.21278 * 120.00232 * 359.97438 * 11 10 8 13 13 C 1.50703 * 119.99658 * 180.02562 * 11 10 8 14 14 C 1.50705 * 109.47130 * 179.97438 * 13 11 10 15 15 C 1.34858 * 125.88749 * 84.97079 * 14 13 11 16 16 C 1.40886 * 107.41073 * 180.02562 * 15 14 13 17 17 C 1.34843 * 107.42122 * 0.02562 * 16 15 14 18 18 C 1.50707 * 125.88787 * 180.02562 * 17 16 15 19 19 O 1.42906 * 109.46990 * 245.02070 * 18 17 16 20 20 Si 1.86294 * 109.47388 * 5.02145 * 18 17 16 21 21 N 1.36339 * 108.22185 * 0.26078 * 17 16 15 22 22 C 1.53779 * 87.17507 * 334.52842 * 8 7 5 23 23 H 1.09001 * 109.47306 * 300.00110 * 1 2 3 24 24 H 1.09002 * 109.47115 * 59.99858 * 1 2 3 25 25 H 1.09001 * 109.46893 * 179.97438 * 1 2 3 26 26 H 1.09004 * 109.46826 * 180.02562 * 3 2 1 27 27 H 1.09002 * 109.47365 * 299.99988 * 3 2 1 28 28 H 1.08998 * 109.47182 * 60.00388 * 3 2 1 29 29 H 1.09001 * 109.47515 * 293.49275 * 4 2 1 30 30 H 1.09001 * 109.47657 * 53.49773 * 4 2 1 31 31 H 1.09007 * 109.47110 * 173.49817 * 4 2 1 32 32 H 1.08997 * 113.61127 * 25.43788 * 7 5 2 33 33 H 1.08991 * 113.61837 * 254.53120 * 7 5 2 34 34 H 0.96997 * 120.00055 * 336.52514 * 10 8 7 35 35 H 1.08996 * 109.47255 * 59.99817 * 13 11 10 36 36 H 1.09004 * 109.46913 * 299.99262 * 13 11 10 37 37 H 1.07998 * 126.28893 * 0.02562 * 15 14 13 38 38 H 1.08004 * 126.28466 * 180.02562 * 16 15 14 39 39 H 1.09003 * 109.47022 * 125.02876 * 18 17 16 40 40 H 0.96693 * 114.00477 * 179.97438 * 19 18 17 41 41 H 1.48503 * 110.00178 * 300.00068 * 20 18 17 42 42 H 1.48502 * 109.99771 * 61.32244 * 20 18 17 43 43 H 0.96998 * 125.64200 * 179.73446 * 21 17 16 44 44 H 1.09002 * 113.61517 * 140.02271 * 22 8 7 45 45 H 1.09000 * 113.61574 * 270.92514 * 22 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2493 5 6 2.0400 -0.7213 1.2491 6 1 1.8193 -0.1808 2.1697 7 6 1.6558 -2.2094 1.3013 8 6 3.0661 -2.4732 1.8547 9 1 3.5306 -3.3745 1.4546 10 7 3.1483 -2.3911 3.3151 11 6 4.1345 -3.0336 3.9716 12 8 4.9536 -3.6801 3.3536 13 6 4.2188 -2.9495 5.4740 14 6 5.4011 -3.7498 5.9564 15 6 6.6740 -3.3111 6.0342 16 6 7.4557 -4.3718 6.5330 17 6 6.6310 -5.4183 6.7404 18 6 7.0350 -6.7698 7.2709 19 8 6.8268 -7.7595 6.2612 20 14 8.8359 -6.7373 7.7465 21 7 5.3697 -5.0446 6.3824 22 6 3.5051 -1.1845 1.1395 23 1 -0.3634 0.5138 0.8900 24 1 -0.3633 0.5139 -0.8900 25 1 -0.3633 -1.0277 -0.0005 26 1 3.1300 1.4425 -0.0005 27 1 1.6766 1.9564 -0.8900 28 1 1.6767 1.9563 0.8900 29 1 1.7749 -1.7769 -1.1931 30 1 1.5848 -0.2789 -2.1355 31 1 3.1238 -0.6215 -1.3094 32 1 1.4825 -2.6502 0.3197 33 1 0.8595 -2.4301 2.0121 34 1 2.4931 -1.8743 3.8094 35 1 3.3053 -3.3515 5.9121 36 1 4.3379 -1.9082 5.7735 37 1 7.0287 -2.3275 5.7639 38 1 8.5200 -4.3505 6.7156 39 1 6.4322 -7.0115 8.1463 40 1 7.0665 -8.6558 6.5336 41 1 9.6685 -6.4089 6.5614 42 1 9.0601 -5.7344 8.8185 43 1 4.5799 -5.6060 6.4264 44 1 4.2008 -0.5784 1.7198 45 1 3.8364 -1.3457 0.1137 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664192_14644196.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:37:44 Heat of formation + Delta-G solvation = -8.373611 kcal Electronic energy + Delta-G solvation = -23602.154933 eV Core-core repulsion = 20201.324387 eV Total energy + Delta-G solvation = -3400.830546 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 293.178 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -42.27207 -41.49086 -39.80153 -37.62475 -36.51046 -33.88692 -32.81265 -31.85827 -29.46230 -28.55504 -28.28662 -26.31630 -26.09552 -24.85508 -22.21573 -21.26111 -21.17175 -20.93440 -19.13357 -18.43070 -18.23390 -17.97847 -16.87820 -16.54828 -16.15496 -15.88458 -15.59758 -15.26105 -15.06785 -14.94982 -14.69863 -14.49680 -14.19012 -13.96375 -13.87740 -13.64741 -13.49034 -13.25465 -13.15208 -12.88275 -12.76587 -12.70054 -12.49573 -12.39323 -12.09490 -11.92537 -11.86541 -11.40840 -11.16927 -10.91312 -10.82208 -10.39844 -9.99540 -9.70035 -8.87145 -4.94253 1.12600 1.31257 1.66984 1.75306 1.93246 2.11668 2.29450 2.50317 3.46811 3.46977 3.50018 3.64828 3.68624 3.80519 3.96412 3.97939 4.00037 4.05569 4.20045 4.21510 4.29224 4.36111 4.48026 4.57210 4.63982 4.70286 4.70457 4.73523 4.83390 4.84378 4.87815 4.93713 4.97318 5.05881 5.08530 5.12695 5.20014 5.31114 5.32427 5.36849 5.41358 5.42647 5.66559 6.07534 6.20583 6.47533 6.59618 6.70262 7.27494 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.141 4.141 2 C -0.060 4.060 3 C -0.141 4.141 4 C -0.148 4.148 5 C -0.098 4.098 6 H 0.087 0.913 7 C -0.143 4.143 8 C 0.119 3.881 9 H 0.099 0.901 10 N -0.715 5.715 11 C 0.512 3.488 12 O -0.519 6.519 13 C -0.071 4.071 14 C 0.037 3.963 15 C -0.171 4.171 16 C -0.194 4.194 17 C 0.036 3.964 18 C -0.053 4.053 19 O -0.549 6.549 20 Si 0.714 3.286 21 N -0.533 5.533 22 C -0.151 4.151 23 H 0.053 0.947 24 H 0.054 0.946 25 H 0.055 0.945 26 H 0.055 0.945 27 H 0.054 0.946 28 H 0.053 0.947 29 H 0.058 0.942 30 H 0.055 0.945 31 H 0.059 0.941 32 H 0.098 0.902 33 H 0.071 0.929 34 H 0.400 0.600 35 H 0.100 0.900 36 H 0.117 0.883 37 H 0.137 0.863 38 H 0.134 0.866 39 H 0.069 0.931 40 H 0.383 0.617 41 H -0.249 1.249 42 H -0.254 1.254 43 H 0.413 0.587 44 H 0.069 0.931 45 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.814 -0.309 3.031 4.881 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.198 4.198 2 C -0.060 4.060 3 C -0.198 4.198 4 C -0.205 4.205 5 C -0.116 4.116 6 H 0.106 0.894 7 C -0.181 4.181 8 C 0.014 3.986 9 H 0.118 0.882 10 N -0.367 5.367 11 C 0.297 3.703 12 O -0.393 6.393 13 C -0.111 4.111 14 C -0.076 4.076 15 C -0.196 4.196 16 C -0.218 4.218 17 C -0.078 4.078 18 C -0.163 4.163 19 O -0.356 6.356 20 Si 0.614 3.386 21 N -0.128 5.128 22 C -0.189 4.189 23 H 0.072 0.928 24 H 0.073 0.927 25 H 0.074 0.926 26 H 0.074 0.926 27 H 0.073 0.927 28 H 0.072 0.928 29 H 0.077 0.923 30 H 0.074 0.926 31 H 0.078 0.922 32 H 0.116 0.884 33 H 0.090 0.910 34 H 0.235 0.765 35 H 0.118 0.882 36 H 0.135 0.865 37 H 0.155 0.845 38 H 0.151 0.849 39 H 0.087 0.913 40 H 0.231 0.769 41 H -0.174 1.174 42 H -0.179 1.179 43 H 0.250 0.750 44 H 0.088 0.912 45 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges -2.804 0.118 2.302 3.630 hybrid contribution -1.330 0.420 0.106 1.398 sum -4.134 0.538 2.408 4.814 Atomic orbital electron populations 1.21849 0.94448 1.01804 1.01731 1.20429 0.95506 0.95399 0.94627 1.21848 1.01096 0.95195 1.01705 1.22041 1.01220 1.00411 0.96864 1.22683 0.95951 0.94872 0.98121 0.89445 1.23437 0.96014 0.96548 1.02111 1.21818 0.97477 0.99472 0.79852 0.88247 1.45679 1.31082 1.53050 1.06937 1.20597 0.80914 0.78958 0.89786 1.90786 1.39337 1.40132 1.69067 1.20128 0.96740 1.01982 0.92286 1.19446 0.95918 0.85292 1.06968 1.20543 0.91614 1.00108 1.07304 1.20523 0.98422 0.94183 1.08715 1.19648 0.84710 0.95019 1.08383 1.24430 1.13332 0.85806 0.92712 1.86533 1.89780 1.19386 1.39856 0.95410 0.74034 0.88228 0.80967 1.41751 1.09099 1.10980 1.50933 1.23636 0.96522 0.97055 1.01703 0.92764 0.92668 0.92572 0.92601 0.92659 0.92773 0.92286 0.92619 0.92210 0.88352 0.91028 0.76542 0.88151 0.86450 0.84493 0.84893 0.91269 0.76949 1.17384 1.17897 0.75039 0.91247 0.88518 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 0.18 8.31 37.16 0.31 0.49 16 2 C -0.06 0.07 0.68 -154.51 -0.11 -0.03 16 3 C -0.14 0.12 8.43 37.16 0.31 0.43 16 4 C -0.15 0.15 7.48 37.16 0.28 0.43 16 5 C -0.10 0.16 2.93 -89.67 -0.26 -0.11 16 6 H 0.09 -0.17 8.14 -51.92 -0.42 -0.59 16 7 C -0.14 0.23 6.40 -25.92 -0.17 0.06 16 8 C 0.12 0.02 4.29 -67.12 -0.29 -0.27 16 9 H 0.10 0.25 7.50 -51.93 -0.39 -0.14 16 10 N -0.72 0.45 5.26 -53.02 -0.28 0.18 16 11 C 0.51 1.09 7.82 -10.98 -0.09 1.00 16 12 O -0.52 -3.79 15.65 5.56 0.09 -3.71 16 13 C -0.07 0.04 6.24 -29.03 -0.18 -0.14 16 14 C 0.04 0.12 5.66 -81.78 -0.46 -0.35 16 15 C -0.17 -0.79 10.77 -39.78 -0.43 -1.22 16 16 C -0.19 -1.02 9.37 -39.78 -0.37 -1.39 16 17 C 0.04 0.15 6.53 -81.79 -0.53 -0.38 16 18 C -0.05 -0.06 3.07 36.01 0.11 0.05 16 19 O -0.55 -0.84 12.86 -35.23 -0.45 -1.29 16 20 Si 0.71 -0.10 30.60 -169.99 -5.20 -5.30 16 21 N -0.53 -1.66 6.07 -5.44 -0.03 -1.69 16 22 C -0.15 0.04 7.11 -25.78 -0.18 -0.14 16 23 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 24 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 25 H 0.06 -0.07 7.56 -51.93 -0.39 -0.47 16 26 H 0.05 -0.03 8.11 -51.93 -0.42 -0.45 16 27 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 28 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 29 H 0.06 -0.07 6.05 -51.93 -0.31 -0.39 16 30 H 0.05 -0.04 8.14 -51.93 -0.42 -0.47 16 31 H 0.06 -0.05 6.46 -51.93 -0.34 -0.38 16 32 H 0.10 -0.16 6.09 -51.93 -0.32 -0.47 16 33 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 34 H 0.40 -1.39 8.70 -40.82 -0.36 -1.75 16 35 H 0.10 -0.32 8.14 -51.93 -0.42 -0.74 16 36 H 0.12 -0.33 8.14 -51.93 -0.42 -0.75 16 37 H 0.14 0.44 8.06 -52.49 -0.42 0.01 16 38 H 0.13 0.61 6.24 -52.48 -0.33 0.28 16 39 H 0.07 -0.07 7.96 -51.93 -0.41 -0.48 16 40 H 0.38 -1.50 8.74 45.56 0.40 -1.10 16 41 H -0.25 -0.89 7.11 56.52 0.40 -0.49 16 42 H -0.25 -0.58 7.11 56.52 0.40 -0.17 16 43 H 0.41 0.36 8.96 -40.82 -0.37 -0.01 16 44 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 45 H 0.10 -0.02 5.70 -51.93 -0.30 -0.31 16 LS Contribution 357.32 15.07 5.38 5.38 Total: 0.00 -9.78 357.32 -9.93 -19.71 By element: Atomic # 1 Polarization: -4.33 SS G_CDS: -7.38 Total: -11.71 kcal Atomic # 6 Polarization: 0.49 SS G_CDS: -2.06 Total: -1.57 kcal Atomic # 7 Polarization: -1.21 SS G_CDS: -0.31 Total: -1.52 kcal Atomic # 8 Polarization: -4.63 SS G_CDS: -0.37 Total: -5.00 kcal Atomic # 14 Polarization: -0.10 SS G_CDS: -5.20 Total: -5.30 kcal Total LS contribution 5.38 Total: 5.38 kcal Total: -9.78 -9.93 -19.71 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664192_14644196.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 11.333 kcal (2) G-P(sol) polarization free energy of solvation -9.776 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 1.557 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.931 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.707 kcal (6) G-S(sol) free energy of system = (1) + (5) -8.374 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds