Wall clock time and date at job start Sun Mar 7 2021 07:38:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.52996 * 109.47407 * 2 1 4 4 C 1.53000 * 109.47107 * 119.99735 * 2 1 3 5 5 C 1.53004 * 109.47297 * 239.99375 * 2 1 3 6 6 H 1.08999 * 112.85062 * 187.46668 * 5 2 1 7 7 C 1.53776 * 113.61584 * 318.66946 * 5 2 1 8 8 C 1.53953 * 87.02087 * 139.94690 * 7 5 2 9 9 H 1.09001 * 113.74742 * 220.05431 * 8 7 5 10 10 N 1.46502 * 113.53846 * 89.18551 * 8 7 5 11 11 C 1.34777 * 120.00071 * 107.50175 * 10 8 7 12 12 O 1.21283 * 119.99699 * 0.02562 * 11 10 8 13 13 C 1.50698 * 120.00335 * 180.02562 * 11 10 8 14 14 O 1.42896 * 109.47196 * 180.02562 * 13 11 10 15 15 C 1.35904 * 117.00165 * 180.02562 * 14 13 11 16 16 C 1.38712 * 120.05992 * 179.72974 * 15 14 13 17 17 C 1.38164 * 119.94520 * 179.76304 * 16 15 14 18 18 C 1.50694 * 119.97275 * 180.22645 * 17 16 15 19 19 O 1.42898 * 109.47530 * 300.25835 * 18 17 16 20 20 Si 1.86306 * 109.47274 * 180.25500 * 18 17 16 21 21 C 1.38247 * 120.05497 * 0.48519 * 17 16 15 22 22 C 1.38285 * 120.10928 * 359.76781 * 21 17 16 23 23 C 1.38125 * 120.06010 * 359.97438 * 22 21 17 24 24 C 1.53781 * 113.61051 * 56.27876 * 5 2 1 25 25 H 1.09001 * 109.46571 * 66.49973 * 1 2 3 26 26 H 1.08999 * 109.47045 * 306.50197 * 1 2 3 27 27 H 1.08998 * 109.47159 * 186.49883 * 1 2 3 28 28 H 1.09000 * 109.47349 * 59.99591 * 3 2 1 29 29 H 1.09001 * 109.47068 * 179.97438 * 3 2 1 30 30 H 1.09000 * 109.47115 * 299.99525 * 3 2 1 31 31 H 1.09007 * 109.46878 * 60.00015 * 4 2 1 32 32 H 1.09001 * 109.47392 * 179.97438 * 4 2 1 33 33 H 1.09002 * 109.47448 * 300.00462 * 4 2 1 34 34 H 1.08996 * 113.61584 * 254.52360 * 7 5 2 35 35 H 1.08999 * 113.61397 * 25.42930 * 7 5 2 36 36 H 0.97000 * 120.00102 * 287.50916 * 10 8 7 37 37 H 1.09000 * 109.47450 * 300.00592 * 13 11 10 38 38 H 1.09003 * 109.46468 * 60.00607 * 13 11 10 39 39 H 1.08006 * 120.02658 * 359.97438 * 16 15 14 40 40 H 1.09004 * 109.47354 * 60.25704 * 18 17 16 41 41 H 0.96696 * 113.99977 * 300.00069 * 19 18 17 42 42 H 1.48501 * 109.99964 * 180.02562 * 20 18 17 43 43 H 1.48498 * 109.99761 * 301.32270 * 20 18 17 44 44 H 1.07997 * 119.94579 * 179.74199 * 21 17 16 45 45 H 1.08008 * 119.97135 * 179.97438 * 22 21 17 46 46 H 1.07997 * 120.03020 * 179.97438 * 23 22 21 47 47 H 1.09002 * 113.61394 * 334.55888 * 24 5 2 48 48 H 1.08992 * 113.61819 * 105.38403 * 24 5 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 6 2.0400 -0.7212 1.2493 5 6 2.0400 -0.7214 -1.2492 6 1 3.1201 -0.8680 -1.2420 7 6 1.2479 -1.9940 -1.5922 8 6 1.3664 -1.5731 -3.0684 9 1 0.4599 -1.7466 -3.6484 10 7 2.5702 -2.0849 -3.7279 11 6 2.4717 -3.0769 -4.6349 12 8 1.3863 -3.5455 -4.9055 13 6 3.7101 -3.6038 -5.3130 14 8 3.3484 -4.6430 -6.2247 15 6 4.3562 -5.2298 -6.9227 16 6 4.0774 -6.2494 -7.8209 17 6 5.1031 -6.8409 -8.5329 18 6 4.8003 -7.9451 -9.5126 19 8 4.1774 -9.0330 -8.8268 20 14 6.3852 -8.5314 -10.2970 21 6 6.4076 -6.4243 -8.3433 22 6 6.6887 -5.4117 -7.4445 23 6 5.6663 -4.8134 -6.7342 24 6 1.5079 -0.1273 -2.5640 25 1 -0.3632 0.4098 -0.9425 26 1 -0.3633 0.6113 0.8261 27 1 -0.3633 -1.0210 0.1163 28 1 1.6767 1.9563 0.8899 29 1 3.1301 1.4424 0.0005 30 1 1.6768 1.9563 -0.8900 31 1 1.6766 -1.7489 1.2493 32 1 3.1300 -0.7216 1.2491 33 1 1.6766 -0.2074 2.1393 34 1 1.7792 -2.9160 -1.3562 35 1 0.2247 -1.9859 -1.2167 36 1 3.4383 -1.7100 -3.5117 37 1 4.1975 -2.7957 -5.8584 38 1 4.3943 -4.0002 -4.5626 39 1 3.0589 -6.5782 -7.9662 40 1 4.1291 -7.5710 -10.2857 41 1 4.7190 -9.4163 -8.1234 42 1 6.1001 -9.6201 -11.2659 43 1 7.0587 -7.4018 -10.9866 44 1 7.2084 -6.8908 -8.8976 45 1 7.7087 -5.0882 -7.2978 46 1 5.8864 -4.0229 -6.0321 47 1 0.5558 0.3920 -2.4546 48 1 2.2482 0.4567 -3.1105 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17664192_4860298.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:38:51 Heat of formation + Delta-G solvation = -55.012949 kcal Electronic energy + Delta-G solvation = -26467.106340 eV Core-core repulsion = 22682.770939 eV Total energy + Delta-G solvation = -3784.335401 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 320.182 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -41.79879 -41.24662 -40.08769 -38.91273 -37.25020 -36.53602 -33.90487 -32.46733 -31.63365 -29.34757 -28.45130 -28.19545 -26.85964 -26.25159 -25.74262 -23.67677 -22.87922 -21.68058 -21.21153 -19.41008 -19.00545 -18.55324 -17.68075 -17.49569 -17.32622 -17.01522 -16.62490 -16.38642 -16.15291 -15.80190 -15.62660 -15.31140 -15.06482 -14.96401 -14.70451 -14.28852 -14.20309 -14.02904 -13.80035 -13.61702 -13.43134 -13.17269 -12.93656 -12.77691 -12.70636 -12.61991 -12.39633 -12.13646 -12.01985 -12.00119 -11.85520 -11.68598 -11.32805 -11.11166 -11.03938 -10.87942 -10.51834 -10.15277 -9.92660 -9.29925 -4.99114 0.19675 0.37893 1.27319 1.37396 1.45783 1.64942 1.96937 2.55578 2.66632 3.45993 3.51364 3.53322 3.55896 3.66592 3.76813 3.82286 3.85025 3.97739 4.05196 4.08899 4.11825 4.23896 4.27206 4.30010 4.34735 4.48659 4.55798 4.61833 4.72022 4.74513 4.78859 4.83446 4.84006 4.96948 4.97087 4.99876 5.04143 5.13937 5.15467 5.22462 5.23579 5.24527 5.36024 5.41522 5.43898 5.45232 5.52108 5.66436 5.69736 6.25288 6.43337 6.74137 7.08214 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.058 4.058 3 C -0.140 4.140 4 C -0.141 4.141 5 C -0.087 4.087 6 H 0.101 0.899 7 C -0.151 4.151 8 C 0.111 3.889 9 H 0.075 0.925 10 N -0.690 5.690 11 C 0.513 3.487 12 O -0.574 6.574 13 C 0.039 3.961 14 O -0.324 6.324 15 C 0.113 3.887 16 C -0.151 4.151 17 C -0.084 4.084 18 C -0.087 4.087 19 O -0.558 6.558 20 Si 0.797 3.203 21 C -0.157 4.157 22 C -0.069 4.069 23 C -0.202 4.202 24 C -0.132 4.132 25 H 0.061 0.939 26 H 0.052 0.948 27 H 0.055 0.945 28 H 0.050 0.950 29 H 0.058 0.942 30 H 0.058 0.942 31 H 0.050 0.950 32 H 0.058 0.942 33 H 0.051 0.949 34 H 0.062 0.938 35 H 0.094 0.906 36 H 0.421 0.579 37 H 0.126 0.874 38 H 0.127 0.873 39 H 0.110 0.890 40 H 0.100 0.900 41 H 0.396 0.604 42 H -0.302 1.302 43 H -0.279 1.279 44 H 0.150 0.850 45 H 0.164 0.836 46 H 0.161 0.839 47 H 0.100 0.900 48 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.956 4.334 4.864 11.074 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.058 4.058 3 C -0.197 4.197 4 C -0.198 4.198 5 C -0.106 4.106 6 H 0.119 0.881 7 C -0.189 4.189 8 C 0.006 3.994 9 H 0.093 0.907 10 N -0.344 5.344 11 C 0.300 3.700 12 O -0.453 6.453 13 C -0.038 4.038 14 O -0.238 6.238 15 C 0.068 3.932 16 C -0.170 4.170 17 C -0.085 4.085 18 C -0.196 4.196 19 O -0.366 6.366 20 Si 0.702 3.298 21 C -0.175 4.175 22 C -0.087 4.087 23 C -0.221 4.221 24 C -0.169 4.169 25 H 0.080 0.920 26 H 0.071 0.929 27 H 0.074 0.926 28 H 0.069 0.931 29 H 0.077 0.923 30 H 0.077 0.923 31 H 0.069 0.931 32 H 0.077 0.923 33 H 0.070 0.930 34 H 0.080 0.920 35 H 0.113 0.887 36 H 0.259 0.741 37 H 0.143 0.857 38 H 0.145 0.855 39 H 0.128 0.872 40 H 0.118 0.882 41 H 0.245 0.755 42 H -0.230 1.230 43 H -0.206 1.206 44 H 0.167 0.833 45 H 0.182 0.818 46 H 0.179 0.821 47 H 0.118 0.882 48 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges 7.934 4.007 3.531 9.564 hybrid contribution -0.777 0.481 0.089 0.919 sum 7.156 4.488 3.620 9.190 Atomic orbital electron populations 1.22052 0.94988 1.01673 1.01972 1.20417 0.95303 0.95523 0.94576 1.21833 1.01168 0.94924 1.01770 1.21847 1.01109 0.99974 0.96906 1.22597 0.99883 0.94664 0.93419 0.88134 1.23613 1.02070 0.98332 0.94891 1.21918 0.88086 0.96194 0.93228 0.90656 1.45343 1.11278 1.36682 1.41101 1.20604 0.90309 0.79724 0.79400 1.90765 1.30988 1.59231 1.64289 1.22713 0.95201 0.91859 0.94045 1.86125 1.33631 1.50276 1.53753 1.19207 0.87706 0.93540 0.92735 1.20287 1.00087 0.97634 0.98980 1.20210 0.93371 0.97475 0.97404 1.25449 1.09788 0.87259 0.97082 1.86475 1.48061 1.48020 1.54090 0.93502 0.76655 0.77986 0.81640 1.21226 0.95106 0.99949 1.01203 1.21347 1.00422 0.93757 0.93187 1.21636 0.90746 1.04646 1.05038 1.23397 1.03328 0.94126 0.96096 0.92007 0.92910 0.92622 0.93118 0.92290 0.92283 0.93096 0.92312 0.92996 0.91950 0.88746 0.74122 0.85670 0.85524 0.87186 0.88222 0.75453 1.23013 1.20579 0.83284 0.81837 0.82149 0.88170 0.89570 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.46 7.49 71.98 0.54 1.00 16 2 C -0.06 0.25 0.68 -52.18 -0.04 0.22 16 3 C -0.14 0.65 8.31 71.98 0.60 1.25 16 4 C -0.14 0.47 8.43 71.98 0.61 1.07 16 5 C -0.09 0.49 2.91 -10.27 -0.03 0.46 16 6 H 0.10 -0.78 8.14 -2.39 -0.02 -0.80 16 7 C -0.15 0.28 7.09 31.18 0.22 0.50 16 8 C 0.11 -0.08 4.33 45.58 0.20 0.12 16 9 H 0.08 0.41 7.46 -2.39 -0.02 0.39 16 10 N -0.69 2.17 5.26 -439.75 -2.31 -0.15 16 11 C 0.51 2.12 7.91 87.66 0.69 2.82 16 12 O -0.57 -9.50 16.10 16.00 0.26 -9.24 16 13 C 0.04 -0.08 5.22 71.24 0.37 0.29 16 14 O -0.32 -2.57 9.67 -73.43 -0.71 -3.28 16 15 C 0.11 0.55 6.69 22.51 0.15 0.71 16 16 C -0.15 -1.10 9.55 22.37 0.21 -0.89 16 17 C -0.08 -0.22 5.39 -19.88 -0.11 -0.33 16 18 C -0.09 -0.19 2.82 71.23 0.20 0.01 16 19 O -0.56 -2.05 12.76 -148.98 -1.90 -3.95 16 20 Si 0.80 -1.55 29.79 68.60 2.04 0.50 16 21 C -0.16 0.33 8.67 22.28 0.19 0.52 16 22 C -0.07 0.30 10.04 22.25 0.22 0.52 16 23 C -0.20 0.50 9.04 22.37 0.20 0.70 16 24 C -0.13 0.72 6.41 31.12 0.20 0.92 16 25 H 0.06 -0.22 6.05 -2.39 -0.01 -0.23 16 26 H 0.05 -0.12 8.14 -2.39 -0.02 -0.14 16 27 H 0.05 -0.12 6.46 -2.39 -0.02 -0.13 16 28 H 0.05 -0.17 8.14 -2.39 -0.02 -0.19 16 29 H 0.06 -0.31 8.14 -2.39 -0.02 -0.33 16 30 H 0.06 -0.29 7.57 -2.39 -0.02 -0.31 16 31 H 0.05 -0.11 8.10 -2.38 -0.02 -0.13 16 32 H 0.06 -0.24 8.14 -2.39 -0.02 -0.26 16 33 H 0.05 -0.13 8.14 -2.39 -0.02 -0.15 16 34 H 0.06 -0.01 8.14 -2.39 -0.02 -0.03 16 35 H 0.09 -0.09 5.69 -2.39 -0.01 -0.11 16 36 H 0.42 -4.58 8.70 -92.71 -0.81 -5.39 16 37 H 0.13 -1.09 7.66 -2.39 -0.02 -1.11 16 38 H 0.13 -1.13 7.66 -2.39 -0.02 -1.15 16 39 H 0.11 1.23 8.06 -2.91 -0.02 1.20 16 40 H 0.10 0.44 7.96 -2.38 -0.02 0.42 16 41 H 0.40 -1.98 8.70 -74.06 -0.64 -2.63 16 42 H -0.30 -1.76 7.11 99.48 0.71 -1.06 16 43 H -0.28 -0.44 7.11 99.48 0.71 0.26 16 44 H 0.15 -1.01 4.87 -2.91 -0.01 -1.02 16 45 H 0.16 -1.76 8.06 -2.91 -0.02 -1.79 16 46 H 0.16 -1.53 6.30 -2.91 -0.02 -1.55 16 47 H 0.10 -0.50 6.09 -2.39 -0.01 -0.52 16 48 H 0.09 -0.65 8.14 -2.39 -0.02 -0.67 16 Total: 0.00 -25.01 379.28 1.37 -23.64 By element: Atomic # 1 Polarization: -16.96 SS G_CDS: -0.44 Total: -17.41 kcal Atomic # 6 Polarization: 5.44 SS G_CDS: 4.44 Total: 9.88 kcal Atomic # 7 Polarization: 2.17 SS G_CDS: -2.31 Total: -0.15 kcal Atomic # 8 Polarization: -14.11 SS G_CDS: -2.35 Total: -16.47 kcal Atomic # 14 Polarization: -1.55 SS G_CDS: 2.04 Total: 0.50 kcal Total: -25.01 1.37 -23.64 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664192_4860298.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -31.374 kcal (2) G-P(sol) polarization free energy of solvation -25.013 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -56.387 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.374 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.639 kcal (6) G-S(sol) free energy of system = (1) + (5) -55.013 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds