Wall clock time and date at job start Sun Mar 7 2021 07:39:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.37643 * 125.67429 * 2 1 4 4 C 1.46673 * 126.22756 * 0.02562 * 3 2 1 5 5 O 1.21696 * 119.99447 * 5.81767 * 4 3 2 6 6 N 1.34771 * 120.00160 * 185.81390 * 4 3 2 7 7 C 1.46501 * 120.00412 * 184.91082 * 6 4 3 8 8 H 1.09000 * 112.84355 * 23.80307 * 7 6 4 9 9 C 1.53784 * 113.61677 * 154.99840 * 7 6 4 10 10 C 1.53780 * 87.07743 * 89.11869 * 9 7 6 11 11 H 1.09005 * 113.61628 * 270.88106 * 10 9 7 12 12 C 1.52998 * 113.61365 * 140.06461 * 10 9 7 13 13 C 1.53008 * 109.46773 * 58.95785 * 12 10 9 14 14 C 1.52996 * 109.47392 * 178.95687 * 12 10 9 15 15 C 1.52992 * 109.47209 * 298.96001 * 12 10 9 16 16 C 1.53771 * 113.61493 * 252.49956 * 7 6 4 17 17 C 1.37889 * 107.54838 * 180.02562 * 3 2 1 18 18 C 1.39886 * 107.08990 * 359.76646 * 17 3 2 19 19 Br 1.89099 * 126.07125 * 180.25201 * 18 17 3 20 20 C 1.35506 * 107.85143 * 0.38525 * 18 17 3 21 21 C 1.50702 * 125.56926 * 179.88002 * 20 18 17 22 22 O 1.42894 * 109.47383 * 149.68799 * 21 20 18 23 23 Si 1.86296 * 109.47089 * 29.68525 * 21 20 18 24 24 H 1.09008 * 109.46774 * 266.19663 * 1 2 3 25 25 H 1.08997 * 109.47198 * 26.19593 * 1 2 3 26 26 H 1.09000 * 109.47671 * 146.19721 * 1 2 3 27 27 H 0.97009 * 120.00002 * 4.90924 * 6 4 3 28 28 H 1.08995 * 113.61321 * 203.67106 * 9 7 6 29 29 H 1.09000 * 113.61317 * 334.56766 * 9 7 6 30 30 H 1.09000 * 109.46922 * 60.00491 * 13 12 10 31 31 H 1.09008 * 109.46495 * 179.97438 * 13 12 10 32 32 H 1.08994 * 109.47028 * 299.99522 * 13 12 10 33 33 H 1.09004 * 109.47267 * 59.99611 * 14 12 10 34 34 H 1.09001 * 109.47792 * 180.02562 * 14 12 10 35 35 H 1.09008 * 109.46967 * 300.00163 * 14 12 10 36 36 H 1.09005 * 109.47603 * 52.38070 * 15 12 10 37 37 H 1.09007 * 109.47466 * 172.38033 * 15 12 10 38 38 H 1.08998 * 109.47109 * 292.38025 * 15 12 10 39 39 H 1.08998 * 113.61503 * 25.43086 * 16 7 6 40 40 H 1.08997 * 113.61686 * 156.33150 * 16 7 6 41 41 H 1.07994 * 126.45787 * 179.97438 * 17 3 2 42 42 H 1.09002 * 109.46884 * 269.68885 * 21 20 18 43 43 H 0.96701 * 114.00486 * 179.97438 * 22 21 20 44 44 H 1.48509 * 110.00003 * 60.00453 * 23 21 20 45 45 H 1.48502 * 110.00128 * 181.31995 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2677 1.1181 0.0000 4 6 1.8121 2.5123 0.0005 5 8 0.6264 2.7648 0.1079 6 7 2.7064 3.5136 -0.1178 7 6 2.2653 4.9064 -0.0094 8 1 1.3386 5.0142 0.5543 9 6 3.3755 5.8711 0.4398 10 6 3.7218 6.0407 -1.0488 11 1 4.4483 5.3146 -1.4136 12 6 4.0731 7.4785 -1.4363 13 6 5.2714 7.9510 -0.6105 14 6 4.4252 7.5343 -2.9242 15 6 2.8740 8.3882 -1.1616 16 6 2.2634 5.6581 -1.3509 17 6 3.5782 0.6892 -0.0006 18 6 3.5529 -0.7095 0.0045 19 35 5.0609 -1.8503 0.0129 20 6 2.2558 -1.1015 -0.0006 21 6 1.7713 -2.5285 -0.0003 22 8 0.5138 -2.6045 0.6741 23 14 3.0126 -3.6056 0.8769 24 1 -0.3633 -0.0682 1.0255 25 1 -0.3633 0.9221 -0.4536 26 1 -0.3634 -0.8539 -0.5717 27 1 3.6422 3.3120 -0.2746 28 1 3.0001 6.7813 0.9074 29 1 4.1635 5.3903 1.0195 30 1 6.1257 7.3030 -0.8063 31 1 5.5219 8.9753 -0.8870 32 1 5.0205 7.9114 0.4494 33 1 3.5716 7.1976 -3.5125 34 1 4.6759 8.5585 -3.2002 35 1 5.2796 6.8862 -3.1198 36 1 2.5383 8.2466 -0.1342 37 1 3.1656 9.4282 -1.3085 38 1 2.0637 8.1379 -1.8463 39 1 2.1536 5.0054 -2.2170 40 1 1.5841 6.5101 -1.3731 41 1 4.4583 1.3150 -0.0011 42 1 1.6538 -2.8725 -1.0280 43 1 0.1411 -3.4960 0.7122 44 1 3.1818 -3.1469 2.2793 45 1 2.5619 -5.0204 0.8563 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17664192_5000100.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:39:03 Heat of formation + Delta-G solvation = -0.725199 kcal Electronic energy + Delta-G solvation = -26217.295083 eV Core-core repulsion = 22476.978194 eV Total energy + Delta-G solvation = -3740.316889 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 371.088 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -42.90218 -41.44971 -39.78076 -37.94217 -36.57865 -34.74702 -33.93795 -32.26863 -31.19482 -28.46620 -28.17616 -27.46671 -27.34685 -26.17945 -25.54178 -23.38236 -21.78917 -21.20267 -20.43582 -19.04098 -18.90684 -18.57054 -17.43864 -17.09442 -16.80011 -16.46260 -16.09932 -15.91910 -15.44504 -15.28025 -14.99126 -14.77328 -14.61835 -14.31911 -14.28040 -14.02723 -13.86351 -13.70354 -13.50450 -13.20335 -13.17585 -12.96662 -12.80667 -12.75144 -12.66669 -12.38631 -12.04639 -11.97759 -11.84236 -11.59239 -11.34120 -11.15364 -11.07796 -10.85485 -10.83034 -10.16962 -9.89599 -9.32358 -4.69698 0.12476 0.32982 0.87960 1.22688 1.40478 1.55758 1.93994 2.09698 2.24712 2.91927 3.44480 3.51365 3.55952 3.59186 3.77335 3.79887 3.88571 4.11147 4.13408 4.19244 4.29417 4.30374 4.33557 4.37761 4.55059 4.60827 4.63213 4.75490 4.78123 4.81565 4.86050 4.87921 4.99597 5.02204 5.07558 5.15568 5.18104 5.22894 5.26115 5.26880 5.44370 5.48260 5.54537 5.59059 5.69927 5.76699 6.38404 6.42496 7.02802 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.080 3.920 2 N -0.391 5.391 3 C -0.062 4.062 4 C 0.592 3.408 5 O -0.578 6.578 6 N -0.683 5.683 7 C 0.115 3.885 8 H 0.082 0.918 9 C -0.131 4.131 10 C -0.090 4.090 11 H 0.097 0.903 12 C -0.057 4.057 13 C -0.141 4.141 14 C -0.142 4.142 15 C -0.148 4.148 16 C -0.149 4.149 17 C -0.088 4.088 18 C -0.195 4.195 19 Br 0.095 6.905 20 C 0.096 3.904 21 C -0.044 4.044 22 O -0.557 6.557 23 Si 0.620 3.380 24 H 0.074 0.926 25 H 0.091 0.909 26 H 0.103 0.897 27 H 0.417 0.583 28 H 0.102 0.898 29 H 0.084 0.916 30 H 0.057 0.943 31 H 0.050 0.950 32 H 0.059 0.941 33 H 0.050 0.950 34 H 0.051 0.949 35 H 0.057 0.943 36 H 0.061 0.939 37 H 0.051 0.949 38 H 0.056 0.944 39 H 0.060 0.940 40 H 0.098 0.902 41 H 0.190 0.810 42 H 0.112 0.888 43 H 0.403 0.597 44 H -0.297 1.297 45 H -0.251 1.251 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.521 0.769 -2.992 5.476 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 N -0.062 5.062 3 C -0.176 4.176 4 C 0.380 3.620 5 O -0.460 6.460 6 N -0.334 5.334 7 C 0.010 3.990 8 H 0.100 0.900 9 C -0.169 4.169 10 C -0.108 4.108 11 H 0.115 0.885 12 C -0.057 4.057 13 C -0.198 4.198 14 C -0.199 4.199 15 C -0.205 4.205 16 C -0.188 4.188 17 C -0.115 4.115 18 C -0.280 4.280 19 Br 0.179 6.821 20 C -0.027 4.027 21 C -0.154 4.154 22 O -0.368 6.368 23 Si 0.522 3.478 24 H 0.092 0.908 25 H 0.110 0.890 26 H 0.122 0.878 27 H 0.255 0.745 28 H 0.121 0.879 29 H 0.103 0.897 30 H 0.076 0.924 31 H 0.069 0.931 32 H 0.078 0.922 33 H 0.069 0.931 34 H 0.070 0.930 35 H 0.076 0.924 36 H 0.080 0.920 37 H 0.071 0.929 38 H 0.075 0.925 39 H 0.078 0.922 40 H 0.117 0.883 41 H 0.207 0.793 42 H 0.130 0.870 43 H 0.254 0.746 44 H -0.224 1.224 45 H -0.176 1.176 Dipole moment (debyes) X Y Z Total from point charges 4.067 0.678 -2.175 4.661 hybrid contribution -1.493 -0.308 0.244 1.544 sum 2.573 0.370 -1.931 3.239 Atomic orbital electron populations 1.22290 0.74370 1.05123 1.04251 1.43920 1.07840 1.04001 1.50470 1.20170 0.90472 0.87697 1.19218 1.16974 0.85395 0.83775 0.75814 1.90801 1.17695 1.85082 1.52377 1.45182 1.11593 1.04617 1.72017 1.21909 0.99076 0.79461 0.98548 0.89997 1.23393 0.97518 0.98928 0.97056 1.22615 0.96054 0.96530 0.95635 0.88450 1.20405 0.95624 0.94252 0.95431 1.21850 0.97199 1.00829 0.99903 1.21859 1.01285 1.01613 0.95133 1.22035 0.97599 0.99029 1.01875 1.23597 0.98181 1.00193 0.96794 1.21497 0.95544 0.92440 1.01996 1.20616 0.90371 0.95048 1.21973 1.96291 1.32357 1.56128 1.97347 1.20065 0.89385 0.88503 1.04781 1.24323 0.93575 0.94498 1.02973 1.86454 1.34374 1.36450 1.79498 0.92929 0.93612 0.78008 0.83239 0.90782 0.89044 0.87819 0.74479 0.87939 0.89702 0.92388 0.93109 0.92190 0.93062 0.92980 0.92410 0.91997 0.92944 0.92535 0.92164 0.88331 0.79268 0.87001 0.74556 1.22394 1.17628 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 0.40 9.28 127.77 1.19 1.58 16 2 N -0.39 -2.40 3.16 -519.60 -1.64 -4.05 16 3 C -0.06 -0.29 6.88 40.35 0.28 -0.01 16 4 C 0.59 3.54 7.77 86.45 0.67 4.22 16 5 O -0.58 -7.63 14.30 -4.34 -0.06 -7.70 16 6 N -0.68 0.65 5.24 -444.02 -2.32 -1.68 16 7 C 0.12 -0.09 4.29 45.52 0.20 0.11 16 8 H 0.08 0.32 7.53 -2.39 -0.02 0.30 16 9 C -0.13 0.68 6.19 31.12 0.19 0.87 16 10 C -0.09 0.46 2.95 -10.27 -0.03 0.43 16 11 H 0.10 -0.62 8.14 -2.38 -0.02 -0.64 16 12 C -0.06 0.23 0.71 -52.18 -0.04 0.19 16 13 C -0.14 0.60 8.26 71.98 0.59 1.19 16 14 C -0.14 0.42 8.47 71.98 0.61 1.03 16 15 C -0.15 0.48 7.29 71.98 0.53 1.01 16 16 C -0.15 0.28 7.12 31.12 0.22 0.50 16 17 C -0.09 0.01 10.33 22.59 0.23 0.24 16 18 C -0.19 -0.36 6.16 22.04 0.14 -0.22 16 19 Br 0.10 -0.17 28.22 -20.37 -0.57 -0.75 16 20 C 0.10 0.41 6.19 41.35 0.26 0.66 16 21 C -0.04 -0.04 2.89 71.24 0.21 0.16 16 22 O -0.56 -0.69 10.45 -148.98 -1.56 -2.25 16 23 Si 0.62 1.76 27.08 68.60 1.86 3.62 16 24 H 0.07 0.46 8.14 -2.38 -0.02 0.44 16 25 H 0.09 0.65 6.24 -2.39 -0.01 0.64 16 26 H 0.10 0.17 7.05 -2.39 -0.02 0.15 16 27 H 0.42 -2.84 7.65 -92.70 -0.71 -3.55 16 28 H 0.10 -0.55 6.34 -2.39 -0.02 -0.57 16 29 H 0.08 -0.57 8.14 -2.39 -0.02 -0.59 16 30 H 0.06 -0.26 8.14 -2.39 -0.02 -0.28 16 31 H 0.05 -0.16 8.14 -2.38 -0.02 -0.18 16 32 H 0.06 -0.28 7.39 -2.39 -0.02 -0.30 16 33 H 0.05 -0.10 8.14 -2.38 -0.02 -0.12 16 34 H 0.05 -0.11 8.14 -2.39 -0.02 -0.13 16 35 H 0.06 -0.20 8.14 -2.38 -0.02 -0.22 16 36 H 0.06 -0.24 6.27 -2.38 -0.01 -0.25 16 37 H 0.05 -0.13 8.13 -2.38 -0.02 -0.15 16 38 H 0.06 -0.14 6.61 -2.39 -0.02 -0.16 16 39 H 0.06 0.03 8.14 -2.39 -0.02 0.01 16 40 H 0.10 -0.17 5.63 -2.39 -0.01 -0.18 16 41 H 0.19 -1.44 7.49 -2.91 -0.02 -1.46 16 42 H 0.11 -0.43 7.96 -2.39 -0.02 -0.45 16 43 H 0.40 -2.67 8.74 -74.06 -0.65 -3.32 16 44 H -0.30 -3.49 7.11 99.48 0.71 -2.78 16 45 H -0.25 -1.31 7.11 99.48 0.71 -0.60 16 Total: 0.00 -15.86 363.76 0.63 -15.24 By element: Atomic # 1 Polarization: -14.09 SS G_CDS: -0.30 Total: -14.40 kcal Atomic # 6 Polarization: 6.72 SS G_CDS: 5.24 Total: 11.96 kcal Atomic # 7 Polarization: -1.76 SS G_CDS: -3.97 Total: -5.73 kcal Atomic # 8 Polarization: -8.32 SS G_CDS: -1.62 Total: -9.94 kcal Atomic # 14 Polarization: 1.76 SS G_CDS: 1.86 Total: 3.62 kcal Atomic # 35 Polarization: -0.17 SS G_CDS: -0.57 Total: -0.75 kcal Total: -15.86 0.63 -15.24 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664192_5000100.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 14.511 kcal (2) G-P(sol) polarization free energy of solvation -15.863 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -1.352 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.627 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.236 kcal (6) G-S(sol) free energy of system = (1) + (5) -0.725 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds