Wall clock time and date at job start Sun Mar 7 2021 07:39:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42909 * 1 3 3 C 1.35964 * 116.99677 * 2 1 4 4 C 1.39457 * 120.11632 * 179.97438 * 3 2 1 5 5 O 1.34777 * 133.23918 * 0.38168 * 4 3 2 6 6 C 1.34933 * 110.83973 * 180.15351 * 5 4 3 7 7 C 1.46989 * 125.14162 * 179.81273 * 6 5 4 8 8 O 1.21646 * 119.99953 * 179.69383 * 7 6 5 9 9 N 1.34781 * 119.99518 * 359.69725 * 7 6 5 10 10 C 1.46505 * 119.99466 * 180.02562 * 9 7 6 11 11 H 1.08995 * 112.90835 * 336.24507 * 10 9 7 12 12 C 1.54050 * 113.61506 * 107.61757 * 10 9 7 13 13 C 1.53773 * 87.07763 * 89.06679 * 12 10 9 14 14 H 1.08996 * 113.61988 * 270.87883 * 13 12 10 15 15 C 1.52999 * 113.61260 * 139.97642 * 13 12 10 16 16 C 1.52998 * 109.47435 * 317.52452 * 15 13 12 17 17 C 1.53006 * 109.47393 * 77.52425 * 15 13 12 18 18 C 1.52998 * 109.47414 * 197.52500 * 15 13 12 19 19 C 1.53775 * 113.61077 * 204.99662 * 10 9 7 20 20 C 1.35818 * 109.71502 * 359.54760 * 6 5 4 21 21 C 1.40604 * 119.13628 * 180.02562 * 4 3 2 22 22 C 1.39781 * 120.12003 * 359.95740 * 21 4 3 23 23 C 1.50693 * 120.09224 * 179.97438 * 22 21 4 24 24 O 1.42903 * 109.47369 * 284.99688 * 23 22 21 25 25 Si 1.86298 * 109.47050 * 165.00343 * 23 22 21 26 26 C 1.36631 * 119.81306 * 0.02562 * 22 21 4 27 27 C 1.38258 * 120.12545 * 0.02562 * 3 2 1 28 28 H 1.08999 * 109.46747 * 299.99908 * 1 2 3 29 29 H 1.09000 * 109.46940 * 59.99387 * 1 2 3 30 30 H 1.08996 * 109.47027 * 179.97438 * 1 2 3 31 31 H 0.96998 * 120.00223 * 359.97438 * 9 7 6 32 32 H 1.09005 * 113.61466 * 334.51980 * 12 10 9 33 33 H 1.08997 * 113.68657 * 203.63055 * 12 10 9 34 34 H 1.09001 * 109.47157 * 66.30005 * 16 15 13 35 35 H 1.08998 * 109.47913 * 186.30053 * 16 15 13 36 36 H 1.09005 * 109.47179 * 306.30634 * 16 15 13 37 37 H 1.09002 * 109.46520 * 60.00013 * 17 15 13 38 38 H 1.08999 * 109.47405 * 180.02562 * 17 15 13 39 39 H 1.08997 * 109.46505 * 300.00308 * 17 15 13 40 40 H 1.09007 * 109.47324 * 60.00240 * 18 15 13 41 41 H 1.09007 * 109.47402 * 180.02562 * 18 15 13 42 42 H 1.09005 * 109.47458 * 299.99964 * 18 15 13 43 43 H 1.09002 * 113.61421 * 156.33527 * 19 10 9 44 44 H 1.09000 * 113.62015 * 25.51655 * 19 10 9 45 45 H 1.07996 * 126.94976 * 180.28975 * 20 6 5 46 46 H 1.08995 * 109.47262 * 45.00318 * 23 22 21 47 47 H 0.96696 * 114.00073 * 300.00738 * 24 23 22 48 48 H 1.48497 * 110.00462 * 179.97438 * 25 23 22 49 49 H 1.48502 * 109.99875 * 301.31907 * 25 23 22 50 50 H 1.07996 * 119.75074 * 179.97438 * 26 22 21 51 51 H 1.07995 * 119.65647 * 359.97438 * 27 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0463 1.2115 0.0000 4 6 3.4388 1.2874 0.0005 5 8 4.4141 0.3572 -0.0054 6 6 5.6318 0.9385 0.0017 7 6 6.9132 0.2183 0.0021 8 8 7.9596 0.8386 0.0032 9 7 6.9286 -1.1295 0.0009 10 6 8.2057 -1.8473 0.0018 11 1 9.0263 -1.2538 -0.4012 12 6 8.5328 -2.5232 1.3469 13 6 7.7781 -3.7556 0.8214 14 1 6.7113 -3.7424 1.0444 15 6 8.4458 -5.0837 1.1838 16 6 9.9584 -4.9646 0.9869 17 6 8.1469 -5.4227 2.6456 18 6 7.8998 -6.1920 0.2813 19 6 8.1176 -3.2618 -0.5949 20 6 5.4945 2.2897 0.0027 21 6 4.0555 2.5509 0.0011 22 6 3.2767 3.7116 0.0002 23 6 3.9383 5.0655 0.0013 24 8 4.4589 5.3403 1.3035 25 14 2.6873 6.3685 -0.4547 26 6 1.9138 3.6151 -0.0007 27 6 1.2958 2.3726 0.0005 28 1 -0.3633 0.5138 0.8900 29 1 -0.3633 0.5139 -0.8899 30 1 -0.3633 -1.0276 -0.0005 31 1 6.0942 -1.6240 0.0003 32 1 8.0519 -2.0487 2.2024 33 1 9.5976 -2.6966 1.5023 34 1 10.3638 -4.2549 1.7080 35 1 10.4222 -5.9395 1.1365 36 1 10.1668 -4.6144 -0.0241 37 1 7.0692 -5.5076 2.7857 38 1 8.6229 -6.3686 2.9039 39 1 8.5358 -4.6331 3.2884 40 1 8.1128 -5.9506 -0.7601 41 1 8.3752 -7.1383 0.5399 42 1 6.8222 -6.2770 0.4215 43 1 9.0691 -3.6369 -0.9717 44 1 7.3020 -3.3852 -1.3075 45 1 6.2875 3.0228 0.0035 46 1 4.7517 5.0731 -0.7242 47 1 3.7892 5.3493 2.0010 48 1 3.3271 7.7085 -0.4566 49 1 2.1150 6.0765 -1.7936 50 1 1.3130 4.5126 -0.0010 51 1 0.2175 2.3119 0.0005 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664192_6672420.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:39:24 Heat of formation + Delta-G solvation = -49.005175 kcal Electronic energy + Delta-G solvation = -32575.090757 eV Core-core repulsion = 28215.881399 eV Total energy + Delta-G solvation = -4359.209358 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.182 amu Computer time = 1.20 seconds Orbital eigenvalues (eV) -43.66103 -41.59413 -40.72173 -39.81979 -39.08220 -37.00582 -36.59440 -33.80300 -33.55429 -31.89100 -30.91990 -28.74165 -28.52579 -28.27442 -26.62011 -26.31303 -26.14536 -24.63156 -23.94165 -22.10513 -21.65756 -21.21301 -19.79222 -19.15725 -18.93319 -18.57069 -17.77175 -17.64499 -17.08569 -16.95063 -16.66165 -16.43035 -16.22014 -16.01916 -15.80367 -15.68442 -15.37212 -15.09709 -14.74377 -14.62396 -14.39643 -14.28904 -14.06540 -13.88439 -13.59235 -13.57863 -13.44101 -13.33844 -13.23124 -12.82564 -12.76990 -12.56316 -12.47334 -12.38304 -12.09501 -12.08795 -11.91749 -11.90185 -11.49284 -11.27329 -11.17186 -10.93643 -10.92579 -10.45947 -10.15913 -9.76255 -8.98989 -5.08509 -0.58456 0.11557 0.71847 1.22357 1.30730 1.61638 1.93830 1.96188 2.05409 2.07173 2.40565 3.22749 3.42209 3.46777 3.49374 3.52620 3.62617 3.69948 3.78918 3.83172 3.86665 4.00260 4.01939 4.08253 4.08306 4.18142 4.20701 4.22442 4.43689 4.44985 4.46515 4.49307 4.64875 4.68841 4.71807 4.75254 4.78028 4.83876 4.88103 4.89950 4.93517 4.97655 5.06062 5.06893 5.07833 5.14212 5.17805 5.23036 5.29760 5.34057 5.39584 5.43602 5.58495 5.66133 6.15703 6.36634 6.56423 6.96955 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.311 6.311 3 C 0.150 3.850 4 C 0.046 3.954 5 O -0.174 6.174 6 C -0.023 4.023 7 C 0.604 3.396 8 O -0.508 6.508 9 N -0.699 5.699 10 C 0.116 3.884 11 H 0.107 0.893 12 C -0.150 4.150 13 C -0.100 4.100 14 H 0.088 0.912 15 C -0.059 4.059 16 C -0.149 4.149 17 C -0.141 4.141 18 C -0.141 4.141 19 C -0.143 4.143 20 C -0.104 4.104 21 C -0.082 4.082 22 C -0.099 4.099 23 C -0.066 4.066 24 O -0.535 6.535 25 Si 0.686 3.314 26 C -0.088 4.088 27 C -0.178 4.178 28 H 0.061 0.939 29 H 0.060 0.940 30 H 0.105 0.895 31 H 0.408 0.592 32 H 0.070 0.930 33 H 0.100 0.900 34 H 0.059 0.941 35 H 0.055 0.945 36 H 0.059 0.941 37 H 0.053 0.947 38 H 0.054 0.946 39 H 0.055 0.945 40 H 0.055 0.945 41 H 0.054 0.946 42 H 0.053 0.947 43 H 0.102 0.898 44 H 0.073 0.927 45 H 0.174 0.826 46 H 0.114 0.886 47 H 0.379 0.621 48 H -0.252 1.252 49 H -0.255 1.255 50 H 0.141 0.859 51 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.265 -2.044 1.100 6.681 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.224 6.224 3 C 0.104 3.896 4 C -0.003 4.003 5 O -0.075 6.075 6 C -0.074 4.074 7 C 0.390 3.610 8 O -0.384 6.384 9 N -0.349 5.349 10 C 0.011 3.989 11 H 0.125 0.875 12 C -0.188 4.188 13 C -0.118 4.118 14 H 0.107 0.893 15 C -0.059 4.059 16 C -0.205 4.205 17 C -0.199 4.199 18 C -0.199 4.199 19 C -0.181 4.181 20 C -0.125 4.125 21 C -0.083 4.083 22 C -0.099 4.099 23 C -0.177 4.177 24 O -0.341 6.341 25 Si 0.587 3.413 26 C -0.105 4.105 27 C -0.197 4.197 28 H 0.080 0.920 29 H 0.079 0.921 30 H 0.123 0.877 31 H 0.244 0.756 32 H 0.089 0.911 33 H 0.118 0.882 34 H 0.078 0.922 35 H 0.074 0.926 36 H 0.078 0.922 37 H 0.072 0.928 38 H 0.074 0.926 39 H 0.074 0.926 40 H 0.075 0.925 41 H 0.073 0.927 42 H 0.073 0.927 43 H 0.120 0.880 44 H 0.092 0.908 45 H 0.192 0.808 46 H 0.131 0.869 47 H 0.226 0.774 48 H -0.177 1.177 49 H -0.179 1.179 50 H 0.158 0.842 51 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges -5.122 -1.447 0.184 5.325 hybrid contribution -0.326 -0.569 -0.169 0.677 sum -5.448 -2.016 0.015 5.809 Atomic orbital electron populations 1.23194 0.77296 1.04767 1.01810 1.86177 1.22176 1.25671 1.88378 1.17736 0.86480 0.85899 0.99464 1.18788 0.87475 0.86967 1.07022 1.84053 1.12664 1.34727 1.76105 1.21973 0.83868 0.92593 1.08920 1.16600 0.85406 0.82118 0.76899 1.90919 1.30305 1.67413 1.49779 1.45574 1.09905 1.05490 1.73934 1.21988 0.86149 0.92786 0.97941 0.87529 1.23647 1.02020 0.95993 0.97178 1.22655 0.99647 0.93719 0.95794 0.89342 1.20424 0.95446 0.94346 0.95685 1.22044 0.94709 1.01869 1.01925 1.21848 1.01455 1.01413 0.95145 1.21851 1.00848 0.97796 0.99364 1.23464 1.03430 0.94131 0.97087 1.22750 0.94782 0.94326 1.00626 1.19406 0.92630 0.92083 1.04209 1.19491 0.92919 0.94456 1.03071 1.25065 1.05495 0.97782 0.89331 1.86544 1.38143 1.93354 1.16017 0.94996 0.83047 0.77808 0.85430 1.20390 0.93082 0.97262 0.99796 1.20976 1.00424 0.90514 1.07784 0.92015 0.92106 0.87654 0.75630 0.91094 0.88189 0.92200 0.92598 0.92226 0.92752 0.92644 0.92588 0.92546 0.92656 0.92741 0.88010 0.90825 0.80844 0.86875 0.77424 1.17680 1.17948 0.84187 0.83364 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.07 9.81 101.05 0.99 0.92 16 2 O -0.31 -0.42 10.50 -19.63 -0.21 -0.63 16 3 C 0.15 0.25 6.70 -39.12 -0.26 -0.02 16 4 C 0.05 0.15 7.35 -38.24 -0.28 -0.13 16 5 O -0.17 -0.63 10.28 2.64 0.03 -0.60 16 6 C -0.02 -0.08 7.07 -36.90 -0.26 -0.34 16 7 C 0.60 2.24 7.80 -12.71 -0.10 2.14 16 8 O -0.51 -3.33 16.43 5.24 0.09 -3.25 16 9 N -0.70 -0.75 5.26 -54.09 -0.28 -1.04 16 10 C 0.12 0.04 4.34 -66.98 -0.29 -0.25 16 11 H 0.11 0.17 7.46 -51.93 -0.39 -0.21 16 12 C -0.15 0.05 7.05 -25.78 -0.18 -0.13 16 13 C -0.10 0.12 2.91 -89.81 -0.26 -0.14 16 14 H 0.09 -0.09 8.14 -51.93 -0.42 -0.51 16 15 C -0.06 0.06 0.68 -154.51 -0.10 -0.04 16 16 C -0.15 0.17 7.53 37.16 0.28 0.45 16 17 C -0.14 0.10 8.42 37.16 0.31 0.41 16 18 C -0.14 0.14 8.33 37.16 0.31 0.45 16 19 C -0.14 0.19 6.45 -25.92 -0.17 0.02 16 20 C -0.10 -0.36 10.68 -37.23 -0.40 -0.75 16 21 C -0.08 -0.23 6.16 -105.21 -0.65 -0.88 16 22 C -0.10 -0.08 5.26 -104.63 -0.55 -0.63 16 23 C -0.07 -0.01 2.70 36.00 0.10 0.09 16 24 O -0.54 -0.33 12.88 -35.23 -0.45 -0.78 16 25 Si 0.69 -0.93 29.93 -169.99 -5.09 -6.01 16 26 C -0.09 0.10 8.62 -39.96 -0.34 -0.24 16 27 C -0.18 0.16 9.03 -39.38 -0.36 -0.19 16 28 H 0.06 -0.26 7.66 -51.93 -0.40 -0.66 16 29 H 0.06 -0.24 7.66 -51.93 -0.40 -0.64 16 30 H 0.11 -0.43 8.14 -51.93 -0.42 -0.86 16 31 H 0.41 -0.14 8.42 -40.82 -0.34 -0.49 16 32 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 33 H 0.10 -0.07 5.72 -51.93 -0.30 -0.37 16 34 H 0.06 -0.07 6.43 -51.93 -0.33 -0.40 16 35 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 36 H 0.06 -0.09 6.00 -51.93 -0.31 -0.40 16 37 H 0.05 -0.03 8.14 -51.93 -0.42 -0.45 16 38 H 0.05 -0.03 8.14 -51.93 -0.42 -0.45 16 39 H 0.06 -0.02 8.05 -51.93 -0.42 -0.44 16 40 H 0.06 -0.06 7.61 -51.93 -0.39 -0.46 16 41 H 0.05 -0.04 8.14 -51.93 -0.42 -0.47 16 42 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 43 H 0.10 -0.18 6.02 -51.93 -0.31 -0.49 16 44 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 45 H 0.17 0.50 8.06 -52.49 -0.42 0.08 16 46 H 0.11 0.10 7.96 -51.93 -0.41 -0.31 16 47 H 0.38 -1.31 8.70 45.56 0.40 -0.91 16 48 H -0.25 -0.51 7.11 56.52 0.40 -0.11 16 49 H -0.25 -0.26 7.11 56.52 0.40 0.14 16 50 H 0.14 -0.58 5.07 -52.49 -0.27 -0.85 16 51 H 0.15 -0.57 6.26 -52.49 -0.33 -0.90 16 LS Contribution 406.72 15.07 6.13 6.13 Total: 0.00 -7.81 406.72 -9.63 -17.44 By element: Atomic # 1 Polarization: -4.37 SS G_CDS: -7.63 Total: -12.00 kcal Atomic # 6 Polarization: 2.95 SS G_CDS: -2.21 Total: 0.74 kcal Atomic # 7 Polarization: -0.75 SS G_CDS: -0.28 Total: -1.04 kcal Atomic # 8 Polarization: -4.71 SS G_CDS: -0.55 Total: -5.26 kcal Atomic # 14 Polarization: -0.93 SS G_CDS: -5.09 Total: -6.01 kcal Total LS contribution 6.13 Total: 6.13 kcal Total: -7.81 -9.63 -17.44 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664192_6672420.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -31.562 kcal (2) G-P(sol) polarization free energy of solvation -7.809 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -39.371 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.634 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.444 kcal (6) G-S(sol) free energy of system = (1) + (5) -49.005 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.21 seconds