Wall clock time and date at job start Sun Mar 7 2021 07:39:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42909 * 1 3 3 C 1.35964 * 116.99677 * 2 1 4 4 C 1.39457 * 120.11632 * 179.97438 * 3 2 1 5 5 O 1.34777 * 133.23918 * 0.38168 * 4 3 2 6 6 C 1.34933 * 110.83973 * 180.15351 * 5 4 3 7 7 C 1.46989 * 125.14162 * 179.81273 * 6 5 4 8 8 O 1.21646 * 119.99953 * 179.69383 * 7 6 5 9 9 N 1.34781 * 119.99518 * 359.69725 * 7 6 5 10 10 C 1.46505 * 119.99466 * 180.02562 * 9 7 6 11 11 H 1.08995 * 112.90835 * 336.24507 * 10 9 7 12 12 C 1.54050 * 113.61506 * 107.61757 * 10 9 7 13 13 C 1.53773 * 87.07763 * 89.06679 * 12 10 9 14 14 H 1.08996 * 113.61988 * 270.87883 * 13 12 10 15 15 C 1.52999 * 113.61260 * 139.97642 * 13 12 10 16 16 C 1.52998 * 109.47435 * 317.52452 * 15 13 12 17 17 C 1.53006 * 109.47393 * 77.52425 * 15 13 12 18 18 C 1.52998 * 109.47414 * 197.52500 * 15 13 12 19 19 C 1.53775 * 113.61077 * 204.99662 * 10 9 7 20 20 C 1.35818 * 109.71502 * 359.54760 * 6 5 4 21 21 C 1.40604 * 119.13628 * 180.02562 * 4 3 2 22 22 C 1.39781 * 120.12003 * 359.95740 * 21 4 3 23 23 C 1.50693 * 120.09224 * 179.97438 * 22 21 4 24 24 O 1.42903 * 109.47369 * 284.99688 * 23 22 21 25 25 Si 1.86298 * 109.47050 * 165.00343 * 23 22 21 26 26 C 1.36631 * 119.81306 * 0.02562 * 22 21 4 27 27 C 1.38258 * 120.12545 * 0.02562 * 3 2 1 28 28 H 1.08999 * 109.46747 * 299.99908 * 1 2 3 29 29 H 1.09000 * 109.46940 * 59.99387 * 1 2 3 30 30 H 1.08996 * 109.47027 * 179.97438 * 1 2 3 31 31 H 0.96998 * 120.00223 * 359.97438 * 9 7 6 32 32 H 1.09005 * 113.61466 * 334.51980 * 12 10 9 33 33 H 1.08997 * 113.68657 * 203.63055 * 12 10 9 34 34 H 1.09001 * 109.47157 * 66.30005 * 16 15 13 35 35 H 1.08998 * 109.47913 * 186.30053 * 16 15 13 36 36 H 1.09005 * 109.47179 * 306.30634 * 16 15 13 37 37 H 1.09002 * 109.46520 * 60.00013 * 17 15 13 38 38 H 1.08999 * 109.47405 * 180.02562 * 17 15 13 39 39 H 1.08997 * 109.46505 * 300.00308 * 17 15 13 40 40 H 1.09007 * 109.47324 * 60.00240 * 18 15 13 41 41 H 1.09007 * 109.47402 * 180.02562 * 18 15 13 42 42 H 1.09005 * 109.47458 * 299.99964 * 18 15 13 43 43 H 1.09002 * 113.61421 * 156.33527 * 19 10 9 44 44 H 1.09000 * 113.62015 * 25.51655 * 19 10 9 45 45 H 1.07996 * 126.94976 * 180.28975 * 20 6 5 46 46 H 1.08995 * 109.47262 * 45.00318 * 23 22 21 47 47 H 0.96696 * 114.00073 * 300.00738 * 24 23 22 48 48 H 1.48497 * 110.00462 * 179.97438 * 25 23 22 49 49 H 1.48502 * 109.99875 * 301.31907 * 25 23 22 50 50 H 1.07996 * 119.75074 * 179.97438 * 26 22 21 51 51 H 1.07995 * 119.65647 * 359.97438 * 27 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0463 1.2115 0.0000 4 6 3.4388 1.2874 0.0005 5 8 4.4141 0.3572 -0.0054 6 6 5.6318 0.9385 0.0017 7 6 6.9132 0.2183 0.0021 8 8 7.9596 0.8386 0.0032 9 7 6.9286 -1.1295 0.0009 10 6 8.2057 -1.8473 0.0018 11 1 9.0263 -1.2538 -0.4012 12 6 8.5328 -2.5232 1.3469 13 6 7.7781 -3.7556 0.8214 14 1 6.7113 -3.7424 1.0444 15 6 8.4458 -5.0837 1.1838 16 6 9.9584 -4.9646 0.9869 17 6 8.1469 -5.4227 2.6456 18 6 7.8998 -6.1920 0.2813 19 6 8.1176 -3.2618 -0.5949 20 6 5.4945 2.2897 0.0027 21 6 4.0555 2.5509 0.0011 22 6 3.2767 3.7116 0.0002 23 6 3.9383 5.0655 0.0013 24 8 4.4589 5.3403 1.3035 25 14 2.6873 6.3685 -0.4547 26 6 1.9138 3.6151 -0.0007 27 6 1.2958 2.3726 0.0005 28 1 -0.3633 0.5138 0.8900 29 1 -0.3633 0.5139 -0.8899 30 1 -0.3633 -1.0276 -0.0005 31 1 6.0942 -1.6240 0.0003 32 1 8.0519 -2.0487 2.2024 33 1 9.5976 -2.6966 1.5023 34 1 10.3638 -4.2549 1.7080 35 1 10.4222 -5.9395 1.1365 36 1 10.1668 -4.6144 -0.0241 37 1 7.0692 -5.5076 2.7857 38 1 8.6229 -6.3686 2.9039 39 1 8.5358 -4.6331 3.2884 40 1 8.1128 -5.9506 -0.7601 41 1 8.3752 -7.1383 0.5399 42 1 6.8222 -6.2770 0.4215 43 1 9.0691 -3.6369 -0.9717 44 1 7.3020 -3.3852 -1.3075 45 1 6.2875 3.0228 0.0035 46 1 4.7517 5.0731 -0.7242 47 1 3.7892 5.3493 2.0010 48 1 3.3271 7.7085 -0.4566 49 1 2.1150 6.0765 -1.7936 50 1 1.3130 4.5126 -0.0010 51 1 0.2175 2.3119 0.0005 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17664192_6672420.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:39:23 Heat of formation + Delta-G solvation = -46.739826 kcal Electronic energy + Delta-G solvation = -32574.992524 eV Core-core repulsion = 28215.881399 eV Total energy + Delta-G solvation = -4359.111125 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.182 amu Computer time = 1.39 seconds Orbital eigenvalues (eV) -43.80874 -41.68399 -40.71755 -40.01101 -39.08775 -37.01869 -36.66194 -33.94320 -33.70083 -31.91963 -30.99202 -28.59695 -28.46983 -28.20466 -26.64162 -26.29198 -26.15487 -24.72450 -24.02489 -22.18338 -21.82108 -21.27480 -19.89745 -19.18324 -18.98277 -18.55913 -17.87037 -17.73357 -17.22642 -16.95648 -16.64893 -16.42640 -16.23162 -16.09522 -15.85598 -15.76281 -15.42506 -15.10639 -14.76630 -14.57245 -14.51116 -14.32701 -14.19247 -13.83554 -13.60727 -13.56655 -13.41600 -13.29558 -13.23382 -12.82292 -12.72455 -12.42131 -12.41253 -12.30398 -12.10255 -12.07560 -11.92311 -11.88298 -11.73806 -11.29079 -11.16184 -11.05829 -10.92314 -10.45607 -10.31745 -9.86277 -9.03259 -5.00733 -0.72636 0.07505 0.55887 1.11833 1.29482 1.67796 1.80176 1.82425 1.99880 2.11880 2.37472 3.12132 3.39367 3.46313 3.51150 3.60995 3.66663 3.73237 3.76145 3.79616 3.84613 3.94663 4.05405 4.14641 4.23430 4.27605 4.32320 4.39080 4.42636 4.43194 4.50026 4.65518 4.71325 4.76314 4.76750 4.78141 4.79130 4.80931 4.84215 4.94219 4.95710 5.00499 5.02041 5.06049 5.12840 5.18065 5.20046 5.21465 5.29172 5.37959 5.42196 5.49788 5.54680 5.63435 6.14025 6.25920 6.74708 6.77918 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 O -0.334 6.334 3 C 0.136 3.864 4 C 0.020 3.980 5 O -0.181 6.181 6 C -0.034 4.034 7 C 0.604 3.396 8 O -0.545 6.545 9 N -0.685 5.685 10 C 0.107 3.893 11 H 0.092 0.908 12 C -0.147 4.147 13 C -0.092 4.092 14 H 0.089 0.911 15 C -0.057 4.057 16 C -0.149 4.149 17 C -0.141 4.141 18 C -0.140 4.140 19 C -0.132 4.132 20 C -0.114 4.114 21 C -0.099 4.099 22 C -0.108 4.108 23 C -0.082 4.082 24 O -0.555 6.555 25 Si 0.798 3.202 26 C -0.078 4.078 27 C -0.164 4.164 28 H 0.078 0.922 29 H 0.075 0.925 30 H 0.114 0.886 31 H 0.416 0.584 32 H 0.059 0.941 33 H 0.105 0.895 34 H 0.058 0.942 35 H 0.054 0.946 36 H 0.064 0.936 37 H 0.053 0.947 38 H 0.054 0.946 39 H 0.051 0.949 40 H 0.059 0.941 41 H 0.053 0.947 42 H 0.053 0.947 43 H 0.111 0.889 44 H 0.078 0.922 45 H 0.169 0.831 46 H 0.096 0.904 47 H 0.396 0.604 48 H -0.301 1.301 49 H -0.280 1.280 50 H 0.177 0.823 51 H 0.185 0.815 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.670 -2.105 1.091 8.989 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 O -0.248 6.248 3 C 0.090 3.910 4 C -0.028 4.028 5 O -0.083 6.083 6 C -0.084 4.084 7 C 0.390 3.610 8 O -0.424 6.424 9 N -0.335 5.335 10 C 0.003 3.997 11 H 0.110 0.890 12 C -0.185 4.185 13 C -0.111 4.111 14 H 0.107 0.893 15 C -0.057 4.057 16 C -0.206 4.206 17 C -0.199 4.199 18 C -0.198 4.198 19 C -0.169 4.169 20 C -0.135 4.135 21 C -0.100 4.100 22 C -0.109 4.109 23 C -0.190 4.190 24 O -0.363 6.363 25 Si 0.702 3.298 26 C -0.095 4.095 27 C -0.182 4.182 28 H 0.096 0.904 29 H 0.093 0.907 30 H 0.133 0.867 31 H 0.253 0.747 32 H 0.078 0.922 33 H 0.124 0.876 34 H 0.077 0.923 35 H 0.073 0.927 36 H 0.083 0.917 37 H 0.072 0.928 38 H 0.074 0.926 39 H 0.071 0.929 40 H 0.078 0.922 41 H 0.072 0.928 42 H 0.072 0.928 43 H 0.129 0.871 44 H 0.097 0.903 45 H 0.187 0.813 46 H 0.114 0.886 47 H 0.246 0.754 48 H -0.229 1.229 49 H -0.206 1.206 50 H 0.194 0.806 51 H 0.202 0.798 Dipole moment (debyes) X Y Z Total from point charges -7.549 -1.574 0.202 7.714 hybrid contribution 0.381 -0.532 -0.156 0.672 sum -7.168 -2.105 0.046 7.471 Atomic orbital electron populations 1.23501 0.75215 1.06022 1.03288 1.86148 1.24411 1.25826 1.88450 1.18006 0.85980 0.86992 1.00018 1.19254 0.88340 0.87029 1.08210 1.84009 1.12680 1.35101 1.76545 1.21897 0.84017 0.92692 1.09785 1.16672 0.85050 0.82735 0.76573 1.90885 1.31437 1.68228 1.51896 1.45536 1.10695 1.04733 1.72527 1.22104 0.85380 0.93313 0.98919 0.88958 1.23633 1.02417 0.96217 0.96240 1.22594 0.99522 0.93320 0.95641 0.89288 1.20401 0.95552 0.94239 0.95469 1.22048 0.94526 1.01820 1.02199 1.21849 1.01378 1.01283 0.95368 1.21841 1.00783 0.97654 0.99484 1.23427 1.04093 0.92346 0.97075 1.22848 0.95554 0.94380 1.00717 1.19591 0.92209 0.93010 1.05185 1.19692 0.93814 0.93884 1.03483 1.25380 1.05904 0.98669 0.89029 1.86505 1.39688 1.93350 1.16765 0.93830 0.80328 0.73042 0.82619 1.20804 0.92379 0.98663 0.97686 1.21443 1.02012 0.89476 1.05301 0.90350 0.90651 0.86741 0.74711 0.92208 0.87649 0.92330 0.92676 0.91736 0.92830 0.92646 0.92943 0.92212 0.92757 0.92797 0.87121 0.90290 0.81347 0.88591 0.75428 1.22921 1.20606 0.80642 0.79809 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.10 9.81 113.37 1.11 1.01 16 2 O -0.33 -0.81 10.50 -93.14 -0.98 -1.79 16 3 C 0.14 0.41 6.70 22.57 0.15 0.56 16 4 C 0.02 0.16 7.35 23.14 0.17 0.33 16 5 O -0.18 -1.72 10.28 -13.47 -0.14 -1.86 16 6 C -0.03 -0.34 7.07 24.00 0.17 -0.17 16 7 C 0.60 6.17 7.80 86.54 0.67 6.85 16 8 O -0.55 -8.93 16.43 -4.18 -0.07 -9.00 16 9 N -0.69 -2.80 5.26 -443.28 -2.33 -5.13 16 10 C 0.11 0.23 4.34 45.61 0.20 0.43 16 11 H 0.09 0.50 7.46 -2.39 -0.02 0.48 16 12 C -0.15 -0.06 7.05 31.21 0.22 0.16 16 13 C -0.09 0.19 2.91 -10.27 -0.03 0.16 16 14 H 0.09 -0.16 8.14 -2.39 -0.02 -0.18 16 15 C -0.06 0.12 0.68 -52.18 -0.04 0.09 16 16 C -0.15 0.35 7.53 71.98 0.54 0.90 16 17 C -0.14 0.15 8.42 71.98 0.61 0.76 16 18 C -0.14 0.33 8.33 71.98 0.60 0.92 16 19 C -0.13 0.31 6.45 31.12 0.20 0.51 16 20 C -0.11 -1.12 10.68 23.79 0.25 -0.87 16 21 C -0.10 -0.72 6.16 -20.25 -0.12 -0.85 16 22 C -0.11 -0.17 5.26 -19.87 -0.10 -0.27 16 23 C -0.08 -0.06 2.70 71.23 0.19 0.13 16 24 O -0.55 -1.01 12.88 -148.98 -1.92 -2.93 16 25 Si 0.80 -2.96 29.93 68.60 2.05 -0.90 16 26 C -0.08 0.34 8.62 22.02 0.19 0.53 16 27 C -0.16 0.65 9.03 22.40 0.20 0.85 16 28 H 0.08 -0.85 7.66 -2.39 -0.02 -0.86 16 29 H 0.07 -0.78 7.66 -2.39 -0.02 -0.80 16 30 H 0.11 -1.09 8.14 -2.39 -0.02 -1.11 16 31 H 0.42 0.35 8.42 -92.71 -0.78 -0.43 16 32 H 0.06 0.18 8.14 -2.38 -0.02 0.16 16 33 H 0.11 -0.06 5.72 -2.39 -0.01 -0.08 16 34 H 0.06 -0.12 6.43 -2.39 -0.02 -0.13 16 35 H 0.05 -0.10 8.14 -2.39 -0.02 -0.12 16 36 H 0.06 -0.21 6.00 -2.38 -0.01 -0.23 16 37 H 0.05 -0.05 8.14 -2.39 -0.02 -0.07 16 38 H 0.05 -0.05 8.14 -2.39 -0.02 -0.07 16 39 H 0.05 -0.02 8.05 -2.39 -0.02 -0.03 16 40 H 0.06 -0.17 7.61 -2.38 -0.02 -0.19 16 41 H 0.05 -0.10 8.14 -2.38 -0.02 -0.12 16 42 H 0.05 -0.11 8.14 -2.38 -0.02 -0.13 16 43 H 0.11 -0.42 6.02 -2.39 -0.01 -0.44 16 44 H 0.08 -0.23 8.14 -2.39 -0.02 -0.25 16 45 H 0.17 1.62 8.06 -2.91 -0.02 1.59 16 46 H 0.10 0.35 7.96 -2.39 -0.02 0.33 16 47 H 0.40 -2.86 8.70 -74.06 -0.64 -3.50 16 48 H -0.30 -1.35 7.11 99.48 0.71 -0.64 16 49 H -0.28 -0.14 7.11 99.48 0.71 0.56 16 50 H 0.18 -2.11 5.07 -2.91 -0.01 -2.12 16 51 H 0.18 -2.13 6.26 -2.91 -0.02 -2.15 16 Total: 0.00 -21.49 406.72 1.39 -20.10 By element: Atomic # 1 Polarization: -10.11 SS G_CDS: -0.41 Total: -10.52 kcal Atomic # 6 Polarization: 6.83 SS G_CDS: 5.19 Total: 12.02 kcal Atomic # 7 Polarization: -2.80 SS G_CDS: -2.33 Total: -5.13 kcal Atomic # 8 Polarization: -12.47 SS G_CDS: -3.10 Total: -15.57 kcal Atomic # 14 Polarization: -2.96 SS G_CDS: 2.05 Total: -0.90 kcal Total: -21.49 1.39 -20.10 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664192_6672420.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -26.640 kcal (2) G-P(sol) polarization free energy of solvation -21.494 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -48.134 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.394 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.100 kcal (6) G-S(sol) free energy of system = (1) + (5) -46.740 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.40 seconds