Wall clock time and date at job start Sun Mar 7 2021 07:39:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.52995 * 109.46912 * 2 1 4 4 C 1.52999 * 109.46820 * 240.00332 * 2 1 3 5 5 C 1.53002 * 109.47010 * 120.00340 * 2 1 3 6 6 H 1.09003 * 112.84661 * 292.52055 * 5 2 1 7 7 C 1.53780 * 113.61627 * 63.72021 * 5 2 1 8 8 C 1.53773 * 87.08021 * 139.97877 * 7 5 2 9 9 H 1.09003 * 113.61511 * 220.01218 * 8 7 5 10 10 N 1.46503 * 113.61631 * 89.20304 * 8 7 5 11 11 C 1.34772 * 120.00567 * 156.52667 * 10 8 7 12 12 O 1.21279 * 119.99731 * 359.97438 * 11 10 8 13 13 C 1.50693 * 120.00239 * 179.97438 * 11 10 8 14 14 N 1.46500 * 109.47435 * 180.02562 * 13 11 10 15 15 C 1.36833 * 125.06156 * 264.70063 * 14 13 11 16 16 C 1.34243 * 109.93772 * 179.81071 * 15 14 13 17 17 C 1.50692 * 126.50230 * 180.16619 * 16 15 14 18 18 O 1.42906 * 109.47446 * 105.31589 * 17 16 15 19 19 Si 1.86304 * 109.47266 * 345.31712 * 17 16 15 20 20 C 1.46496 * 106.99426 * 0.43058 * 16 15 14 21 21 C 1.39598 * 134.02794 * 179.75697 * 20 16 15 22 22 C 1.36660 * 119.76005 * 179.97438 * 21 20 16 23 23 C 1.38797 * 120.52735 * 0.02562 * 22 21 20 24 24 C 1.37789 * 120.66843 * 359.97438 * 23 22 21 25 25 C 1.37691 * 125.06276 * 84.99458 * 14 13 11 26 26 C 1.53777 * 87.08583 * 334.56872 * 8 7 5 27 27 H 1.09006 * 109.47184 * 299.99582 * 1 2 3 28 28 H 1.09001 * 109.47525 * 59.99974 * 1 2 3 29 29 H 1.09001 * 109.47202 * 179.97438 * 1 2 3 30 30 H 1.08997 * 109.47193 * 179.97438 * 3 2 1 31 31 H 1.08997 * 109.47445 * 300.00079 * 3 2 1 32 32 H 1.09006 * 109.46855 * 60.00217 * 3 2 1 33 33 H 1.09001 * 109.47209 * 293.48637 * 4 2 1 34 34 H 1.09001 * 109.47346 * 53.49299 * 4 2 1 35 35 H 1.09002 * 109.46678 * 173.49361 * 4 2 1 36 36 H 1.08996 * 113.61418 * 25.42812 * 7 5 2 37 37 H 1.09003 * 113.68956 * 254.53941 * 7 5 2 38 38 H 0.97000 * 119.99572 * 336.52345 * 10 8 7 39 39 H 1.09002 * 109.47082 * 299.99843 * 13 11 10 40 40 H 1.09000 * 109.47522 * 59.99979 * 13 11 10 41 41 H 1.07998 * 125.03339 * 359.95425 * 15 14 13 42 42 H 1.09003 * 109.47582 * 225.31698 * 17 16 15 43 43 H 0.96697 * 113.99381 * 300.00237 * 18 17 16 44 44 H 1.48500 * 109.99942 * 58.67908 * 19 17 16 45 45 H 1.48499 * 110.00124 * 180.02562 * 19 17 16 46 46 H 1.07991 * 120.12149 * 359.97438 * 21 20 16 47 47 H 1.07996 * 119.73992 * 179.97438 * 22 21 20 48 48 H 1.07996 * 119.66397 * 180.02562 * 23 22 21 49 49 H 1.07993 * 120.11366 * 179.97438 * 24 23 22 50 50 H 1.08989 * 113.61953 * 139.98373 * 26 8 7 51 51 H 1.09005 * 113.61371 * 270.88711 * 26 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0399 -0.7212 -1.2493 5 6 2.0400 -0.7213 1.2492 6 1 1.8183 -0.1814 2.1698 7 6 1.6572 -2.2098 1.3005 8 6 3.0674 -2.4725 1.8545 9 1 3.5335 -3.3725 1.4533 10 7 3.1484 -2.3929 3.3151 11 6 4.1349 -3.0350 3.9714 12 8 4.9554 -3.6793 3.3529 13 6 4.2185 -2.9526 5.4738 14 7 5.3692 -3.7289 5.9423 15 6 5.3183 -5.0254 6.3769 16 6 6.5458 -5.4383 6.7301 17 6 6.9163 -6.8009 7.2564 18 8 7.5845 -7.5414 6.2330 19 14 5.3731 -7.7081 7.7724 20 6 7.4558 -4.3110 6.5129 21 6 8.8269 -4.1220 6.6946 22 6 9.3918 -2.9158 6.3885 23 6 8.6131 -1.8766 5.8986 24 6 7.2579 -2.0416 5.7116 25 6 6.6620 -3.2609 6.0161 26 6 3.5030 -1.1823 1.1402 27 1 -0.3634 0.5138 0.8901 28 1 -0.3634 0.5138 -0.8900 29 1 -0.3634 -1.0277 -0.0005 30 1 3.1299 1.4425 0.0005 31 1 1.6766 1.9563 -0.8899 32 1 1.6766 1.9563 0.8901 33 1 1.7749 -1.7770 -1.1930 34 1 1.5846 -0.2790 -2.1354 35 1 3.1237 -0.6214 -1.3094 36 1 1.4847 -2.6504 0.3186 37 1 0.8606 -2.4330 2.0104 38 1 2.4920 -1.8778 3.8099 39 1 4.3365 -1.9115 5.7745 40 1 3.3053 -3.3559 5.9113 41 1 4.4235 -5.6280 6.4262 42 1 7.5777 -6.6910 8.1159 43 1 7.0538 -7.6778 5.4362 44 1 4.4491 -7.8365 6.6169 45 1 5.7250 -9.0532 8.2939 46 1 9.4390 -4.9259 7.0757 47 1 10.4525 -2.7698 6.5296 48 1 9.0741 -0.9294 5.6608 49 1 6.6604 -1.2268 5.3303 50 1 4.1967 -0.5745 1.7210 51 1 3.8352 -1.3419 0.1144 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664192_9818708.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:39:44 Heat of formation + Delta-G solvation = 19.650613 kcal Electronic energy + Delta-G solvation = -30249.445366 eV Core-core repulsion = 26309.614001 eV Total energy + Delta-G solvation = -3939.831365 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.193 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -42.49408 -41.62077 -40.00688 -38.01651 -37.59530 -36.60872 -34.25802 -33.60537 -31.31956 -30.11807 -29.00368 -28.61880 -28.34469 -26.41709 -26.30000 -25.38889 -23.65084 -22.75161 -21.85593 -21.30267 -20.57661 -19.24945 -18.67361 -18.43555 -17.67975 -17.30523 -16.88760 -16.61346 -16.29911 -16.19413 -16.01086 -15.86939 -15.43836 -15.25191 -15.23780 -14.72760 -14.59154 -14.49143 -14.27373 -13.99932 -13.96172 -13.80074 -13.54110 -13.36837 -13.21215 -12.87111 -12.83293 -12.59657 -12.55659 -12.44236 -12.26036 -12.17170 -12.00553 -11.87596 -11.62131 -11.49084 -11.26042 -11.09123 -11.01263 -10.41665 -10.33922 -10.18013 -9.01787 -8.52627 -4.90547 0.28465 0.80330 1.36964 1.38104 1.43596 1.63633 1.72151 2.03296 2.11126 3.11853 3.35314 3.39932 3.45961 3.49034 3.59831 3.61333 3.73237 3.74830 3.81382 3.86778 3.92439 4.08578 4.11647 4.14250 4.32200 4.38011 4.40106 4.56494 4.59936 4.61067 4.63951 4.66894 4.70977 4.72979 4.81303 4.81484 4.84935 4.89299 4.91283 4.98222 4.99478 5.00226 5.06255 5.09864 5.26163 5.26545 5.32249 5.35317 5.53686 5.65456 5.81697 5.87206 5.90783 6.16243 6.32261 6.37553 6.62140 7.01114 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.141 4.141 2 C -0.059 4.059 3 C -0.141 4.141 4 C -0.149 4.149 5 C -0.098 4.098 6 H 0.088 0.912 7 C -0.143 4.143 8 C 0.119 3.881 9 H 0.100 0.900 10 N -0.710 5.710 11 C 0.493 3.507 12 O -0.513 6.513 13 C 0.092 3.908 14 N -0.465 5.465 15 C 0.066 3.934 16 C -0.193 4.193 17 C -0.037 4.037 18 O -0.530 6.530 19 Si 0.682 3.318 20 C -0.086 4.086 21 C -0.065 4.065 22 C -0.146 4.146 23 C -0.096 4.096 24 C -0.128 4.128 25 C 0.109 3.891 26 C -0.150 4.150 27 H 0.054 0.946 28 H 0.055 0.945 29 H 0.055 0.945 30 H 0.055 0.945 31 H 0.055 0.945 32 H 0.053 0.947 33 H 0.058 0.942 34 H 0.055 0.945 35 H 0.059 0.941 36 H 0.099 0.901 37 H 0.072 0.928 38 H 0.402 0.598 39 H 0.118 0.882 40 H 0.123 0.877 41 H 0.168 0.832 42 H 0.114 0.886 43 H 0.374 0.626 44 H -0.261 1.261 45 H -0.257 1.257 46 H 0.123 0.877 47 H 0.123 0.877 48 H 0.125 0.875 49 H 0.114 0.886 50 H 0.068 0.932 51 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.468 4.560 1.513 8.057 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.199 4.199 2 C -0.059 4.059 3 C -0.199 4.199 4 C -0.206 4.206 5 C -0.116 4.116 6 H 0.106 0.894 7 C -0.180 4.180 8 C 0.014 3.986 9 H 0.118 0.882 10 N -0.363 5.363 11 C 0.277 3.723 12 O -0.386 6.386 13 C -0.035 4.035 14 N -0.149 5.149 15 C -0.059 4.059 16 C -0.201 4.201 17 C -0.147 4.147 18 O -0.336 6.336 19 Si 0.583 3.417 20 C -0.090 4.090 21 C -0.083 4.083 22 C -0.165 4.165 23 C -0.116 4.116 24 C -0.148 4.148 25 C 0.005 3.995 26 C -0.188 4.188 27 H 0.073 0.927 28 H 0.074 0.926 29 H 0.074 0.926 30 H 0.074 0.926 31 H 0.074 0.926 32 H 0.072 0.928 33 H 0.077 0.923 34 H 0.074 0.926 35 H 0.078 0.922 36 H 0.118 0.882 37 H 0.091 0.909 38 H 0.236 0.764 39 H 0.136 0.864 40 H 0.141 0.859 41 H 0.185 0.815 42 H 0.132 0.868 43 H 0.222 0.778 44 H -0.186 1.186 45 H -0.181 1.181 46 H 0.141 0.859 47 H 0.141 0.859 48 H 0.143 0.857 49 H 0.132 0.868 50 H 0.087 0.913 51 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges -6.165 3.517 1.285 7.213 hybrid contribution -0.150 0.282 -1.095 1.141 sum -6.316 3.799 0.190 7.373 Atomic orbital electron populations 1.21852 0.94389 1.01826 1.01790 1.20430 0.95553 0.95408 0.94555 1.21848 1.01077 0.95173 1.01766 1.22044 1.01211 1.00404 0.96912 1.22642 0.95870 0.94880 0.98229 0.89411 1.23444 0.95839 0.96556 1.02207 1.21850 0.97771 0.99609 0.79415 0.88164 1.45632 1.30715 1.52785 1.07178 1.21027 0.81513 0.79585 0.90224 1.90813 1.39156 1.40028 1.68646 1.21584 0.90347 0.99373 0.92152 1.43191 1.05472 1.11073 1.55137 1.21582 0.98908 0.84665 1.00719 1.20582 0.92045 0.96340 1.11106 1.24289 1.07224 0.89998 0.93219 1.86594 1.43854 1.74899 1.28301 0.95354 0.77554 0.82550 0.86206 1.18939 0.93323 0.92709 1.04055 1.20309 0.92510 0.97216 0.98304 1.20672 0.99986 0.93403 1.02417 1.20825 0.92603 0.99133 0.99006 1.19948 0.95195 0.94575 1.05096 1.18166 0.83351 0.95670 1.02339 1.23586 0.96626 0.96862 1.01768 0.92734 0.92624 0.92563 0.92617 0.92601 0.92757 0.92291 0.92555 0.92225 0.88248 0.90913 0.76371 0.86382 0.85875 0.81451 0.86831 0.77835 1.18601 1.18119 0.85905 0.85925 0.85748 0.86797 0.91291 0.88407 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 0.28 8.31 37.16 0.31 0.59 16 2 C -0.06 0.12 0.68 -154.51 -0.11 0.02 16 3 C -0.14 0.22 8.43 37.15 0.31 0.53 16 4 C -0.15 0.25 7.49 37.16 0.28 0.53 16 5 C -0.10 0.26 2.93 -89.81 -0.26 -0.01 16 6 H 0.09 -0.27 8.14 -51.93 -0.42 -0.69 16 7 C -0.14 0.39 6.40 -25.92 -0.17 0.22 16 8 C 0.12 -0.13 4.30 -67.12 -0.29 -0.42 16 9 H 0.10 0.13 7.50 -51.93 -0.39 -0.26 16 10 N -0.71 1.62 5.27 -53.02 -0.28 1.34 16 11 C 0.49 0.18 7.90 -10.99 -0.09 0.09 16 12 O -0.51 -2.91 16.04 5.56 0.09 -2.82 16 13 C 0.09 -0.21 6.48 -5.20 -0.03 -0.25 16 14 N -0.47 -0.65 2.27 -115.71 -0.26 -0.92 16 15 C 0.07 0.08 9.89 -16.73 -0.17 -0.09 16 16 C -0.19 -0.50 5.58 -102.71 -0.57 -1.07 16 17 C -0.04 -0.06 3.06 36.00 0.11 0.05 16 18 O -0.53 -1.85 12.88 -35.23 -0.45 -2.31 16 19 Si 0.68 -0.20 30.81 -169.99 -5.24 -5.44 16 20 C -0.09 -0.37 6.35 -105.13 -0.67 -1.04 16 21 C -0.06 -0.24 10.05 -39.64 -0.40 -0.64 16 22 C -0.15 -0.40 9.97 -39.94 -0.40 -0.80 16 23 C -0.10 -0.23 10.01 -39.54 -0.40 -0.62 16 24 C -0.13 -0.35 10.00 -39.43 -0.39 -0.74 16 25 C 0.11 0.39 6.80 -83.99 -0.57 -0.18 16 26 C -0.15 0.20 7.09 -25.92 -0.18 0.02 16 27 H 0.05 -0.11 8.14 -51.93 -0.42 -0.53 16 28 H 0.05 -0.09 8.14 -51.93 -0.42 -0.51 16 29 H 0.06 -0.11 7.57 -51.93 -0.39 -0.51 16 30 H 0.05 -0.07 8.10 -51.93 -0.42 -0.49 16 31 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 32 H 0.05 -0.09 8.14 -51.93 -0.42 -0.51 16 33 H 0.06 -0.11 6.05 -51.93 -0.31 -0.43 16 34 H 0.06 -0.08 8.14 -51.93 -0.42 -0.50 16 35 H 0.06 -0.09 6.46 -51.93 -0.34 -0.42 16 36 H 0.10 -0.25 6.09 -51.93 -0.32 -0.57 16 37 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 38 H 0.40 -2.12 8.71 -40.82 -0.36 -2.48 16 39 H 0.12 -0.53 8.14 -51.93 -0.42 -0.95 16 40 H 0.12 -0.70 8.12 -51.93 -0.42 -1.12 16 41 H 0.17 -0.26 6.27 -52.49 -0.33 -0.59 16 42 H 0.11 0.11 7.96 -51.93 -0.41 -0.30 16 43 H 0.37 0.42 8.70 45.56 0.40 0.81 16 44 H -0.26 -0.34 7.00 56.52 0.40 0.06 16 45 H -0.26 -0.77 7.11 56.52 0.40 -0.37 16 46 H 0.12 0.34 8.06 -52.49 -0.42 -0.08 16 47 H 0.12 0.10 8.06 -52.49 -0.42 -0.32 16 48 H 0.12 0.02 8.06 -52.49 -0.42 -0.40 16 49 H 0.11 0.10 8.06 -52.49 -0.42 -0.33 16 50 H 0.07 -0.03 8.14 -51.94 -0.42 -0.45 16 51 H 0.10 -0.10 5.69 -51.93 -0.30 -0.40 16 LS Contribution 405.80 15.07 6.12 6.12 Total: 0.00 -9.30 405.80 -12.00 -21.30 By element: Atomic # 1 Polarization: -5.18 SS G_CDS: -8.29 Total: -13.47 kcal Atomic # 6 Polarization: -0.12 SS G_CDS: -3.68 Total: -3.80 kcal Atomic # 7 Polarization: 0.97 SS G_CDS: -0.54 Total: 0.43 kcal Atomic # 8 Polarization: -4.76 SS G_CDS: -0.36 Total: -5.13 kcal Atomic # 14 Polarization: -0.20 SS G_CDS: -5.24 Total: -5.44 kcal Total LS contribution 6.12 Total: 6.12 kcal Total: -9.30 -12.00 -21.30 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664192_9818708.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 40.950 kcal (2) G-P(sol) polarization free energy of solvation -9.304 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 31.646 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.996 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.299 kcal (6) G-S(sol) free energy of system = (1) + (5) 19.651 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds