Wall clock time and date at job start Sun Mar 7 2021 07:39:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.52995 * 109.46912 * 2 1 4 4 C 1.52999 * 109.46820 * 240.00332 * 2 1 3 5 5 C 1.53002 * 109.47010 * 120.00340 * 2 1 3 6 6 H 1.09003 * 112.84661 * 292.52055 * 5 2 1 7 7 C 1.53780 * 113.61627 * 63.72021 * 5 2 1 8 8 C 1.53773 * 87.08021 * 139.97877 * 7 5 2 9 9 H 1.09003 * 113.61511 * 220.01218 * 8 7 5 10 10 N 1.46503 * 113.61631 * 89.20304 * 8 7 5 11 11 C 1.34772 * 120.00567 * 156.52667 * 10 8 7 12 12 O 1.21279 * 119.99731 * 359.97438 * 11 10 8 13 13 C 1.50693 * 120.00239 * 179.97438 * 11 10 8 14 14 N 1.46500 * 109.47435 * 180.02562 * 13 11 10 15 15 C 1.36833 * 125.06156 * 264.70063 * 14 13 11 16 16 C 1.34243 * 109.93772 * 179.81071 * 15 14 13 17 17 C 1.50692 * 126.50230 * 180.16619 * 16 15 14 18 18 O 1.42906 * 109.47446 * 105.31589 * 17 16 15 19 19 Si 1.86304 * 109.47266 * 345.31712 * 17 16 15 20 20 C 1.46496 * 106.99426 * 0.43058 * 16 15 14 21 21 C 1.39598 * 134.02794 * 179.75697 * 20 16 15 22 22 C 1.36660 * 119.76005 * 179.97438 * 21 20 16 23 23 C 1.38797 * 120.52735 * 0.02562 * 22 21 20 24 24 C 1.37789 * 120.66843 * 359.97438 * 23 22 21 25 25 C 1.37691 * 125.06276 * 84.99458 * 14 13 11 26 26 C 1.53777 * 87.08583 * 334.56872 * 8 7 5 27 27 H 1.09006 * 109.47184 * 299.99582 * 1 2 3 28 28 H 1.09001 * 109.47525 * 59.99974 * 1 2 3 29 29 H 1.09001 * 109.47202 * 179.97438 * 1 2 3 30 30 H 1.08997 * 109.47193 * 179.97438 * 3 2 1 31 31 H 1.08997 * 109.47445 * 300.00079 * 3 2 1 32 32 H 1.09006 * 109.46855 * 60.00217 * 3 2 1 33 33 H 1.09001 * 109.47209 * 293.48637 * 4 2 1 34 34 H 1.09001 * 109.47346 * 53.49299 * 4 2 1 35 35 H 1.09002 * 109.46678 * 173.49361 * 4 2 1 36 36 H 1.08996 * 113.61418 * 25.42812 * 7 5 2 37 37 H 1.09003 * 113.68956 * 254.53941 * 7 5 2 38 38 H 0.97000 * 119.99572 * 336.52345 * 10 8 7 39 39 H 1.09002 * 109.47082 * 299.99843 * 13 11 10 40 40 H 1.09000 * 109.47522 * 59.99979 * 13 11 10 41 41 H 1.07998 * 125.03339 * 359.95425 * 15 14 13 42 42 H 1.09003 * 109.47582 * 225.31698 * 17 16 15 43 43 H 0.96697 * 113.99381 * 300.00237 * 18 17 16 44 44 H 1.48500 * 109.99942 * 58.67908 * 19 17 16 45 45 H 1.48499 * 110.00124 * 180.02562 * 19 17 16 46 46 H 1.07991 * 120.12149 * 359.97438 * 21 20 16 47 47 H 1.07996 * 119.73992 * 179.97438 * 22 21 20 48 48 H 1.07996 * 119.66397 * 180.02562 * 23 22 21 49 49 H 1.07993 * 120.11366 * 179.97438 * 24 23 22 50 50 H 1.08989 * 113.61953 * 139.98373 * 26 8 7 51 51 H 1.09005 * 113.61371 * 270.88711 * 26 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0399 -0.7212 -1.2493 5 6 2.0400 -0.7213 1.2492 6 1 1.8183 -0.1814 2.1698 7 6 1.6572 -2.2098 1.3005 8 6 3.0674 -2.4725 1.8545 9 1 3.5335 -3.3725 1.4533 10 7 3.1484 -2.3929 3.3151 11 6 4.1349 -3.0350 3.9714 12 8 4.9554 -3.6793 3.3529 13 6 4.2185 -2.9526 5.4738 14 7 5.3692 -3.7289 5.9423 15 6 5.3183 -5.0254 6.3769 16 6 6.5458 -5.4383 6.7301 17 6 6.9163 -6.8009 7.2564 18 8 7.5845 -7.5414 6.2330 19 14 5.3731 -7.7081 7.7724 20 6 7.4558 -4.3110 6.5129 21 6 8.8269 -4.1220 6.6946 22 6 9.3918 -2.9158 6.3885 23 6 8.6131 -1.8766 5.8986 24 6 7.2579 -2.0416 5.7116 25 6 6.6620 -3.2609 6.0161 26 6 3.5030 -1.1823 1.1402 27 1 -0.3634 0.5138 0.8901 28 1 -0.3634 0.5138 -0.8900 29 1 -0.3634 -1.0277 -0.0005 30 1 3.1299 1.4425 0.0005 31 1 1.6766 1.9563 -0.8899 32 1 1.6766 1.9563 0.8901 33 1 1.7749 -1.7770 -1.1930 34 1 1.5846 -0.2790 -2.1354 35 1 3.1237 -0.6214 -1.3094 36 1 1.4847 -2.6504 0.3186 37 1 0.8606 -2.4330 2.0104 38 1 2.4920 -1.8778 3.8099 39 1 4.3365 -1.9115 5.7745 40 1 3.3053 -3.3559 5.9113 41 1 4.4235 -5.6280 6.4262 42 1 7.5777 -6.6910 8.1159 43 1 7.0538 -7.6778 5.4362 44 1 4.4491 -7.8365 6.6169 45 1 5.7250 -9.0532 8.2939 46 1 9.4390 -4.9259 7.0757 47 1 10.4525 -2.7698 6.5296 48 1 9.0741 -0.9294 5.6608 49 1 6.6604 -1.2268 5.3303 50 1 4.1967 -0.5745 1.7210 51 1 3.8352 -1.3419 0.1144 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17664192_9818708.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:39:42 Heat of formation + Delta-G solvation = 22.821850 kcal Electronic energy + Delta-G solvation = -30249.307851 eV Core-core repulsion = 26309.614001 eV Total energy + Delta-G solvation = -3939.693850 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.193 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -42.55888 -41.54393 -40.01338 -38.16366 -37.72661 -36.54428 -34.28980 -33.59230 -31.40964 -30.25090 -29.01507 -28.46769 -28.22183 -26.32154 -26.23720 -25.36836 -23.77575 -22.83743 -21.86336 -21.21438 -20.67703 -19.12401 -18.69909 -18.44933 -17.74402 -17.35515 -16.84876 -16.53781 -16.41441 -16.16560 -16.11428 -15.84844 -15.41927 -15.31030 -15.14364 -14.83125 -14.71947 -14.48476 -14.24771 -14.10361 -13.81825 -13.70303 -13.53699 -13.29310 -13.10462 -12.77328 -12.74358 -12.71386 -12.58045 -12.41716 -12.39227 -12.03494 -12.01596 -11.86998 -11.74750 -11.36744 -11.14600 -11.11754 -10.89903 -10.56349 -10.46243 -10.12325 -9.16969 -8.64428 -4.89716 0.13246 0.62990 1.34024 1.40402 1.42616 1.61371 1.69287 1.99509 2.17823 2.93917 3.48941 3.50877 3.54583 3.59194 3.66862 3.70562 3.76144 3.83028 3.86847 4.03402 4.06938 4.14081 4.21223 4.25450 4.28021 4.29273 4.49147 4.54697 4.58229 4.70605 4.71106 4.72504 4.76798 4.78130 4.81830 4.82647 4.89149 4.94783 4.98427 5.02387 5.12336 5.12923 5.14576 5.20797 5.23314 5.40451 5.44300 5.50037 5.50180 5.65566 5.66841 5.72887 5.74464 6.17941 6.22296 6.45689 6.53344 7.12100 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.140 4.140 2 C -0.058 4.058 3 C -0.141 4.141 4 C -0.150 4.150 5 C -0.087 4.087 6 H 0.101 0.899 7 C -0.131 4.131 8 C 0.114 3.886 9 H 0.071 0.929 10 N -0.693 5.693 11 C 0.492 3.508 12 O -0.575 6.575 13 C 0.089 3.911 14 N -0.466 5.466 15 C 0.074 3.926 16 C -0.215 4.215 17 C -0.057 4.057 18 O -0.556 6.556 19 Si 0.787 3.213 20 C -0.116 4.116 21 C -0.088 4.088 22 C -0.154 4.154 23 C -0.107 4.107 24 C -0.134 4.134 25 C 0.091 3.909 26 C -0.151 4.151 27 H 0.059 0.941 28 H 0.049 0.951 29 H 0.058 0.942 30 H 0.049 0.951 31 H 0.051 0.949 32 H 0.058 0.942 33 H 0.061 0.939 34 H 0.052 0.948 35 H 0.053 0.947 36 H 0.097 0.903 37 H 0.087 0.913 38 H 0.420 0.580 39 H 0.145 0.855 40 H 0.166 0.834 41 H 0.197 0.803 42 H 0.110 0.890 43 H 0.381 0.619 44 H -0.274 1.274 45 H -0.304 1.304 46 H 0.119 0.881 47 H 0.136 0.864 48 H 0.145 0.855 49 H 0.132 0.868 50 H 0.059 0.941 51 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.914 5.664 2.260 10.801 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.197 4.197 2 C -0.058 4.058 3 C -0.199 4.199 4 C -0.207 4.207 5 C -0.105 4.105 6 H 0.119 0.881 7 C -0.169 4.169 8 C 0.008 3.992 9 H 0.089 0.911 10 N -0.346 5.346 11 C 0.278 3.722 12 O -0.453 6.453 13 C -0.036 4.036 14 N -0.148 5.148 15 C -0.051 4.051 16 C -0.222 4.222 17 C -0.165 4.165 18 O -0.363 6.363 19 Si 0.691 3.309 20 C -0.120 4.120 21 C -0.106 4.106 22 C -0.173 4.173 23 C -0.127 4.127 24 C -0.155 4.155 25 C -0.014 4.014 26 C -0.189 4.189 27 H 0.078 0.922 28 H 0.068 0.932 29 H 0.078 0.922 30 H 0.068 0.932 31 H 0.070 0.930 32 H 0.077 0.923 33 H 0.080 0.920 34 H 0.071 0.929 35 H 0.072 0.928 36 H 0.115 0.885 37 H 0.106 0.894 38 H 0.258 0.742 39 H 0.163 0.837 40 H 0.184 0.816 41 H 0.214 0.786 42 H 0.128 0.872 43 H 0.229 0.771 44 H -0.200 1.200 45 H -0.232 1.232 46 H 0.137 0.863 47 H 0.154 0.846 48 H 0.163 0.837 49 H 0.149 0.851 50 H 0.078 0.922 51 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges -8.648 4.692 2.030 10.046 hybrid contribution 0.648 -0.045 -1.384 1.529 sum -8.000 4.647 0.646 9.275 Atomic orbital electron populations 1.21836 0.94057 1.02025 1.01790 1.20414 0.95729 0.95107 0.94551 1.21847 1.00716 0.95495 1.01804 1.22053 1.00873 1.00641 0.97119 1.22587 0.94471 0.94966 0.98463 0.88109 1.23376 0.95020 0.96172 1.02329 1.21797 0.98841 0.98419 0.80119 0.91086 1.45487 1.30346 1.51979 1.06746 1.21530 0.80817 0.78563 0.91327 1.90800 1.41552 1.42899 1.70038 1.21990 0.90666 1.00872 0.90059 1.43421 1.05677 1.11312 1.54419 1.22025 0.99317 0.84789 0.99018 1.20709 0.92527 0.96382 1.12631 1.24731 1.08846 0.90254 0.92635 1.86554 1.45301 1.75297 1.29182 0.94180 0.74768 0.78407 0.83561 1.19349 0.93881 0.94048 1.04732 1.20458 0.92927 0.97776 0.99485 1.20920 1.00867 0.93283 1.02196 1.21130 0.92793 0.99847 0.98881 1.20236 0.95595 0.94921 1.04698 1.18396 0.84525 0.95829 1.02639 1.23559 0.97436 0.96704 1.01220 0.92228 0.93161 0.92247 0.93178 0.93022 0.92271 0.92028 0.92927 0.92754 0.88466 0.89443 0.74175 0.83725 0.81628 0.78589 0.87202 0.77058 1.19994 1.23169 0.86271 0.84566 0.83732 0.85062 0.92198 0.89148 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 0.71 8.31 71.98 0.60 1.30 16 2 C -0.06 0.27 0.68 -52.18 -0.04 0.23 16 3 C -0.14 0.49 8.43 71.98 0.61 1.10 16 4 C -0.15 0.47 7.49 71.98 0.54 1.01 16 5 C -0.09 0.55 2.93 -10.27 -0.03 0.52 16 6 H 0.10 -0.85 8.14 -2.39 -0.02 -0.87 16 7 C -0.13 0.85 6.40 31.12 0.20 1.05 16 8 C 0.11 -0.26 4.30 45.51 0.20 -0.06 16 9 H 0.07 0.30 7.50 -2.39 -0.02 0.28 16 10 N -0.69 4.04 5.27 -440.06 -2.32 1.73 16 11 C 0.49 -0.02 7.90 87.66 0.69 0.68 16 12 O -0.57 -7.09 16.04 -3.02 -0.05 -7.14 16 13 C 0.09 -0.61 6.48 85.63 0.56 -0.05 16 14 N -0.47 -0.95 2.27 -520.00 -1.18 -2.13 16 15 C 0.07 0.12 9.89 83.00 0.82 0.94 16 16 C -0.22 -1.30 5.58 -18.63 -0.10 -1.40 16 17 C -0.06 -0.25 3.06 71.23 0.22 -0.03 16 18 O -0.56 -4.97 12.88 -148.98 -1.92 -6.89 16 19 Si 0.79 -0.71 30.81 68.60 2.11 1.40 16 20 C -0.12 -1.19 6.35 -20.20 -0.13 -1.32 16 21 C -0.09 -0.87 10.05 22.23 0.22 -0.65 16 22 C -0.15 -1.08 9.97 22.03 0.22 -0.86 16 23 C -0.11 -0.58 10.01 22.30 0.22 -0.35 16 24 C -0.13 -0.77 10.00 22.37 0.22 -0.55 16 25 C 0.09 0.70 6.80 39.03 0.27 0.96 16 26 C -0.15 0.37 7.09 31.12 0.22 0.59 16 27 H 0.06 -0.34 8.14 -2.38 -0.02 -0.36 16 28 H 0.05 -0.18 8.14 -2.39 -0.02 -0.20 16 29 H 0.06 -0.32 7.57 -2.39 -0.02 -0.34 16 30 H 0.05 -0.11 8.10 -2.39 -0.02 -0.13 16 31 H 0.05 -0.13 8.14 -2.39 -0.02 -0.15 16 32 H 0.06 -0.25 8.14 -2.38 -0.02 -0.27 16 33 H 0.06 -0.23 6.05 -2.39 -0.01 -0.24 16 34 H 0.05 -0.12 8.14 -2.39 -0.02 -0.14 16 35 H 0.05 -0.11 6.46 -2.39 -0.02 -0.13 16 36 H 0.10 -0.55 6.09 -2.39 -0.01 -0.56 16 37 H 0.09 -0.78 8.14 -2.39 -0.02 -0.80 16 38 H 0.42 -5.56 8.71 -92.71 -0.81 -6.37 16 39 H 0.15 -1.73 8.14 -2.39 -0.02 -1.75 16 40 H 0.17 -2.56 8.12 -2.39 -0.02 -2.57 16 41 H 0.20 -1.02 6.27 -2.91 -0.02 -1.04 16 42 H 0.11 0.44 7.96 -2.39 -0.02 0.42 16 43 H 0.38 1.56 8.70 -74.06 -0.64 0.92 16 44 H -0.27 -0.32 7.00 99.48 0.70 0.37 16 45 H -0.30 -2.10 7.11 99.48 0.71 -1.39 16 46 H 0.12 1.05 8.06 -2.92 -0.02 1.03 16 47 H 0.14 0.39 8.06 -2.91 -0.02 0.37 16 48 H 0.14 0.03 8.06 -2.91 -0.02 0.01 16 49 H 0.13 0.14 8.06 -2.91 -0.02 0.12 16 50 H 0.06 -0.03 8.14 -2.39 -0.02 -0.05 16 51 H 0.09 -0.09 5.69 -2.38 -0.01 -0.10 16 Total: 0.00 -25.55 405.80 1.67 -23.88 By element: Atomic # 1 Polarization: -13.48 SS G_CDS: -0.49 Total: -13.97 kcal Atomic # 6 Polarization: -2.38 SS G_CDS: 5.50 Total: 3.13 kcal Atomic # 7 Polarization: 3.09 SS G_CDS: -3.50 Total: -0.41 kcal Atomic # 8 Polarization: -12.07 SS G_CDS: -1.97 Total: -14.04 kcal Atomic # 14 Polarization: -0.71 SS G_CDS: 2.11 Total: 1.40 kcal Total: -25.55 1.67 -23.88 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664192_9818708.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 46.703 kcal (2) G-P(sol) polarization free energy of solvation -25.547 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 21.157 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.665 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.882 kcal (6) G-S(sol) free energy of system = (1) + (5) 22.822 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds