Wall clock time and date at job start Sun Mar 7 2021 10:14:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86299 * 109.47259 * 2 1 4 4 C 1.50702 * 109.46973 * 119.99315 * 2 1 3 5 5 C 1.34842 * 125.65049 * 65.00110 * 4 2 1 6 6 C 1.40796 * 107.04811 * 180.02562 * 5 4 2 7 7 C 1.36102 * 106.73664 * 0.02562 * 6 5 4 8 8 C 1.47565 * 125.94629 * 179.97438 * 7 6 5 9 9 C 1.39924 * 119.95668 * 359.96828 * 8 7 6 10 10 C 1.36424 * 120.28147 * 179.74262 * 9 8 7 11 11 C 1.39877 * 120.18206 * 0.56373 * 10 9 8 12 12 C 1.47299 * 120.04201 * 179.71536 * 11 10 9 13 13 O 1.21628 * 119.99693 * 179.72798 * 12 11 10 14 14 N 1.34778 * 120.00332 * 359.72423 * 12 11 10 15 15 C 1.46498 * 120.00084 * 180.02562 * 14 12 11 16 16 C 1.52998 * 109.47009 * 180.02562 * 15 14 12 17 17 H 1.08998 * 112.85151 * 43.80768 * 16 15 14 18 18 C 1.53781 * 113.61293 * 175.00083 * 16 15 14 19 19 C 1.53786 * 87.17350 * 89.15989 * 18 16 15 20 20 O 1.42907 * 113.61055 * 270.92744 * 19 18 16 21 21 C 1.52990 * 113.61464 * 140.02626 * 19 18 16 22 22 F 1.39897 * 109.47425 * 59.99764 * 21 19 18 23 23 F 1.39900 * 109.47354 * 179.97438 * 21 19 18 24 24 F 1.39899 * 109.47234 * 299.99577 * 21 19 18 25 25 C 1.53781 * 113.69014 * 272.53464 * 16 15 14 26 26 C 1.40407 * 119.90832 * 359.43993 * 11 10 9 27 27 O 1.35679 * 120.13492 * 180.25079 * 26 11 10 28 28 C 1.38276 * 119.72355 * 0.27725 * 26 11 10 29 29 O 1.34230 * 125.65789 * 245.29058 * 4 2 1 30 30 H 0.96705 * 113.99916 * 60.00628 * 1 2 3 31 31 H 1.08992 * 109.47628 * 239.99530 * 2 1 3 32 32 H 1.48498 * 110.00251 * 59.99372 * 3 2 1 33 33 H 1.48497 * 110.00348 * 181.31555 * 3 2 1 34 34 H 1.07999 * 126.47387 * 0.02562 * 5 4 2 35 35 H 1.08001 * 126.63117 * 179.97438 * 6 5 4 36 36 H 1.08004 * 119.85746 * 0.02562 * 9 8 7 37 37 H 1.08001 * 119.90947 * 180.28193 * 10 9 8 38 38 H 0.96997 * 119.99352 * 0.02562 * 14 12 11 39 39 H 1.09004 * 109.46967 * 60.00256 * 15 14 12 40 40 H 1.08994 * 109.46938 * 300.00263 * 15 14 12 41 41 H 1.09002 * 113.61445 * 203.74988 * 18 16 15 42 42 H 1.09002 * 113.61408 * 334.56719 * 18 16 15 43 43 H 0.96698 * 113.99817 * 179.97438 * 20 19 18 44 44 H 1.09005 * 113.61471 * 25.42550 * 25 16 15 45 45 H 1.08996 * 113.61178 * 156.23892 * 25 16 15 46 46 H 0.96706 * 113.99344 * 90.00422 * 27 26 11 47 47 H 1.08000 * 120.08739 * 180.02562 * 28 26 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7103 1.2306 5 6 1.7566 -2.0179 1.5096 6 6 2.3798 -2.2625 2.7482 7 6 2.9063 -1.0779 3.1628 8 6 3.6541 -0.8532 4.4149 9 6 3.8739 -1.9162 5.2978 10 6 4.5689 -1.7171 6.4547 11 6 5.0568 -0.4452 6.7720 12 6 5.8014 -0.2324 8.0250 13 8 6.2295 0.8729 8.2976 14 7 6.0082 -1.2623 8.8693 15 6 6.7483 -1.0505 10.1157 16 6 6.8414 -2.3702 10.8841 17 1 7.0891 -3.2165 10.2435 18 6 7.7058 -2.2845 12.1531 19 6 6.4273 -1.8779 12.9047 20 8 6.1906 -0.4686 12.9109 21 6 6.3061 -2.5082 14.2935 22 9 7.3949 -2.1169 15.0799 23 9 5.1183 -2.0816 14.8972 24 9 6.2944 -3.9020 14.1736 25 6 5.6434 -2.6304 11.8127 26 6 4.8407 0.6271 5.8917 27 8 5.3163 1.8617 6.1924 28 6 4.1408 0.4198 4.7173 29 8 2.6219 -0.1450 2.2332 30 1 -0.3933 0.4416 -0.7651 31 1 1.7923 -0.5139 -0.8898 32 1 1.5614 2.4680 1.2084 33 1 3.5345 1.7703 -0.0320 34 1 1.2369 -2.7409 0.8984 35 1 2.4297 -3.2073 3.2690 36 1 3.4956 -2.8996 5.0602 37 1 4.7390 -2.5429 7.1297 38 1 5.6670 -2.1438 8.6516 39 1 6.2293 -0.3106 10.7251 40 1 7.7519 -0.6927 9.8860 41 1 8.1121 -3.2450 12.4704 42 1 8.4593 -1.4978 12.1158 43 1 5.3877 -0.2066 13.3818 44 1 4.7310 -2.1219 11.5011 45 1 5.4849 -3.6854 12.0357 46 1 6.2099 2.0299 5.8630 47 1 3.9716 1.2403 4.0358 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664666_12807986.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:14:54 Heat of formation + Delta-G solvation = -222.276887 kcal Electronic energy + Delta-G solvation = -38767.532707 eV Core-core repulsion = 32856.614703 eV Total energy + Delta-G solvation = -5910.918004 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 414.121 amu Computer time = 1.44 seconds Orbital eigenvalues (eV) -51.23852 -48.79192 -48.68870 -43.77953 -41.71751 -41.13753 -39.51283 -38.07776 -37.84030 -36.67700 -35.21464 -34.29176 -33.52199 -31.43573 -30.80780 -29.87100 -27.59044 -27.34483 -26.51477 -24.35611 -24.12105 -23.50563 -22.43602 -21.87814 -21.31600 -20.84541 -20.13646 -19.68704 -19.52131 -19.40017 -18.77234 -18.63475 -18.01636 -17.51435 -17.25389 -17.08220 -16.64496 -16.41737 -16.32269 -16.25061 -16.01576 -15.89352 -15.60232 -15.51016 -15.35522 -15.18015 -15.15267 -14.89001 -14.85396 -14.71243 -14.58766 -14.50424 -14.27954 -14.12325 -14.01456 -13.94293 -13.68403 -13.58079 -13.54336 -13.10643 -12.80318 -12.72414 -12.63062 -12.31049 -12.10981 -11.86619 -11.79162 -11.31641 -11.16524 -10.79439 -10.73991 -10.52335 -10.10105 -9.99630 -9.04662 -5.15120 -0.82378 0.06631 0.60571 1.07901 1.34705 1.46672 1.52317 1.62448 1.95383 1.97784 1.98873 2.29364 2.52297 2.57281 2.61160 2.77335 2.96300 3.15997 3.18773 3.30596 3.40616 3.47858 3.53380 3.57409 3.70556 3.73259 3.87042 3.90348 4.08481 4.13413 4.18353 4.24374 4.29730 4.33165 4.50074 4.51972 4.58395 4.62869 4.66132 4.72860 4.74495 4.79817 4.95051 5.00140 5.05878 5.13427 5.34220 5.34993 5.42284 5.93829 6.03147 6.40310 6.40778 6.65646 7.20189 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.036 4.036 3 Si 0.706 3.294 4 C -0.002 4.002 5 C -0.168 4.168 6 C -0.175 4.175 7 C 0.021 3.979 8 C 0.030 3.970 9 C -0.115 4.115 10 C -0.064 4.064 11 C -0.164 4.164 12 C 0.558 3.442 13 O -0.515 6.515 14 N -0.728 5.728 15 C 0.132 3.868 16 C -0.113 4.113 17 H 0.099 0.901 18 C -0.109 4.109 19 C 0.061 3.939 20 O -0.507 6.507 21 C 0.433 3.567 22 F -0.175 7.175 23 F -0.183 7.183 24 F -0.175 7.175 25 C -0.154 4.154 26 C 0.179 3.821 27 O -0.474 6.474 28 C -0.142 4.142 29 O -0.169 6.169 30 H 0.391 0.609 31 H 0.096 0.904 32 H -0.248 1.248 33 H -0.252 1.252 34 H 0.158 0.842 35 H 0.159 0.841 36 H 0.140 0.860 37 H 0.137 0.863 38 H 0.398 0.602 39 H 0.091 0.909 40 H 0.075 0.925 41 H 0.113 0.887 42 H 0.100 0.900 43 H 0.392 0.608 44 H 0.093 0.907 45 H 0.109 0.891 46 H 0.399 0.601 47 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.800 -4.698 -6.220 7.836 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.145 4.145 3 Si 0.605 3.395 4 C -0.052 4.052 5 C -0.187 4.187 6 C -0.194 4.194 7 C -0.028 4.028 8 C 0.030 3.970 9 C -0.133 4.133 10 C -0.083 4.083 11 C -0.168 4.168 12 C 0.345 3.655 13 O -0.391 6.391 14 N -0.382 5.382 15 C 0.009 3.991 16 C -0.131 4.131 17 H 0.118 0.882 18 C -0.146 4.146 19 C 0.017 3.983 20 O -0.314 6.314 21 C 0.378 3.622 22 F -0.156 7.156 23 F -0.164 7.164 24 F -0.157 7.157 25 C -0.192 4.192 26 C 0.132 3.868 27 O -0.285 6.285 28 C -0.161 4.161 29 O -0.066 6.066 30 H 0.240 0.760 31 H 0.114 0.886 32 H -0.172 1.172 33 H -0.177 1.177 34 H 0.176 0.824 35 H 0.176 0.824 36 H 0.157 0.843 37 H 0.155 0.845 38 H 0.233 0.767 39 H 0.109 0.891 40 H 0.093 0.907 41 H 0.131 0.869 42 H 0.118 0.882 43 H 0.243 0.757 44 H 0.112 0.888 45 H 0.127 0.873 46 H 0.258 0.742 47 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 0.197 -3.205 -5.022 5.961 hybrid contribution -0.431 -1.424 0.565 1.592 sum -0.235 -4.629 -4.457 6.431 Atomic orbital electron populations 1.86467 1.16308 1.81997 1.50267 1.23793 0.86206 1.11705 0.92820 0.95267 0.80992 0.76226 0.87048 1.21471 1.00262 0.92628 0.90864 1.21556 1.03540 0.95664 0.97956 1.21908 1.01808 0.98353 0.97328 1.20354 1.04060 0.87533 0.90857 1.17762 0.95498 0.93778 0.89973 1.20700 1.00173 0.98707 0.93770 1.20812 0.95552 0.95476 0.96424 1.20486 1.04693 0.94265 0.97363 1.17925 0.79892 0.84473 0.83189 1.90864 1.49682 1.23352 1.75184 1.45870 1.58230 1.12213 1.21861 1.21299 0.97661 0.96067 0.84050 1.22397 0.96215 0.98755 0.95782 0.88239 1.23117 0.94674 1.03766 0.93063 1.23687 1.02587 0.84317 0.87672 1.86652 1.49495 1.17126 1.78136 1.21283 0.73968 0.77232 0.89685 1.93230 1.54715 1.90579 1.77055 1.93191 1.47894 1.89564 1.85770 1.93185 1.96171 1.30219 1.96076 1.23858 0.98829 1.02082 0.94410 1.18269 0.93855 0.84165 0.90461 1.84778 1.36311 1.27540 1.79895 1.21571 1.00436 0.97043 0.97019 1.83961 1.58238 1.37984 1.26453 0.75995 0.88592 1.17227 1.17655 0.82446 0.82355 0.84254 0.84521 0.76665 0.89071 0.90704 0.86887 0.88174 0.75738 0.88842 0.87293 0.74229 0.84214 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.28 12.86 -35.23 -0.45 -0.17 16 2 C -0.04 0.02 2.97 36.01 0.11 0.13 16 3 Si 0.71 -0.64 32.11 -169.99 -5.46 -6.10 16 4 C 0.00 -0.01 6.24 -35.51 -0.22 -0.23 16 5 C -0.17 -0.29 10.78 -39.82 -0.43 -0.72 16 6 C -0.17 -0.21 10.25 -39.38 -0.40 -0.62 16 7 C 0.02 0.06 7.02 -36.55 -0.26 -0.20 16 8 C 0.03 0.05 5.87 -104.95 -0.62 -0.57 16 9 C -0.12 0.10 9.48 -39.60 -0.38 -0.27 16 10 C -0.06 0.09 9.47 -39.62 -0.38 -0.29 16 11 C -0.16 -0.24 5.89 -104.78 -0.62 -0.86 16 12 C 0.56 1.41 7.75 -12.58 -0.10 1.32 16 13 O -0.51 -3.32 15.14 -16.70 -0.25 -3.57 16 14 N -0.73 0.70 5.50 -61.42 -0.34 0.36 16 15 C 0.13 -0.11 5.26 -4.04 -0.02 -0.13 16 16 C -0.11 0.38 3.94 -89.81 -0.35 0.02 16 17 H 0.10 -0.49 8.14 -51.93 -0.42 -0.91 16 18 C -0.11 0.28 6.85 -25.92 -0.18 0.10 16 19 C 0.06 -0.10 1.37 -89.67 -0.12 -0.22 16 20 O -0.51 0.46 11.45 -35.23 -0.40 0.06 16 21 C 0.43 -0.02 2.86 37.15 0.11 0.09 16 22 F -0.17 -0.30 17.18 2.25 0.04 -0.26 16 23 F -0.18 -0.12 16.65 2.25 0.04 -0.08 16 24 F -0.18 -0.02 15.77 2.25 0.04 0.01 16 25 C -0.15 0.51 6.92 -25.78 -0.18 0.33 16 26 C 0.18 0.49 6.71 -38.75 -0.26 0.23 16 27 O -0.47 -1.64 11.56 -40.69 -0.47 -2.11 16 28 C -0.14 -0.34 9.65 -39.06 -0.38 -0.72 16 29 O -0.17 -0.69 8.79 4.73 0.04 -0.65 16 30 H 0.39 -2.36 8.74 45.56 0.40 -1.96 16 31 H 0.10 -0.30 7.96 -51.93 -0.41 -0.71 16 32 H -0.25 -0.79 7.11 56.52 0.40 -0.39 16 33 H -0.25 -0.48 7.11 56.52 0.40 -0.08 16 34 H 0.16 -0.02 8.06 -52.49 -0.42 -0.45 16 35 H 0.16 -0.27 7.24 -52.49 -0.38 -0.65 16 36 H 0.14 -0.47 6.95 -52.48 -0.36 -0.83 16 37 H 0.14 -0.66 6.38 -52.49 -0.33 -1.00 16 38 H 0.40 -1.56 6.48 -40.82 -0.26 -1.82 16 39 H 0.09 0.10 6.13 -51.93 -0.32 -0.22 16 40 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 41 H 0.11 -0.41 7.88 -51.93 -0.41 -0.82 16 42 H 0.10 -0.20 8.10 -51.93 -0.42 -0.62 16 43 H 0.39 -1.38 8.43 45.56 0.38 -1.00 16 44 H 0.09 -0.30 8.10 -51.93 -0.42 -0.72 16 45 H 0.11 -0.43 7.15 -51.93 -0.37 -0.80 16 46 H 0.40 -0.17 9.06 45.56 0.41 0.24 16 47 H 0.14 0.34 7.90 -52.49 -0.41 -0.08 16 LS Contribution 411.35 15.07 6.20 6.20 Total: 0.00 -13.07 411.35 -9.08 -22.14 By element: Atomic # 1 Polarization: -9.86 SS G_CDS: -3.38 Total: -13.24 kcal Atomic # 6 Polarization: 2.07 SS G_CDS: -4.67 Total: -2.60 kcal Atomic # 7 Polarization: 0.70 SS G_CDS: -0.34 Total: 0.36 kcal Atomic # 8 Polarization: -4.89 SS G_CDS: -1.54 Total: -6.43 kcal Atomic # 9 Polarization: -0.44 SS G_CDS: 0.11 Total: -0.33 kcal Atomic # 14 Polarization: -0.64 SS G_CDS: -5.46 Total: -6.10 kcal Total LS contribution 6.20 Total: 6.20 kcal Total: -13.07 -9.08 -22.14 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664666_12807986.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -200.133 kcal (2) G-P(sol) polarization free energy of solvation -13.068 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -213.201 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.076 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.144 kcal (6) G-S(sol) free energy of system = (1) + (5) -222.277 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.44 seconds