Wall clock time and date at job start Sun Mar 7 2021 10:14:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86299 * 109.47259 * 2 1 4 4 C 1.50702 * 109.46973 * 119.99315 * 2 1 3 5 5 C 1.34842 * 125.65049 * 65.00110 * 4 2 1 6 6 C 1.40796 * 107.04811 * 180.02562 * 5 4 2 7 7 C 1.36102 * 106.73664 * 0.02562 * 6 5 4 8 8 C 1.47565 * 125.94629 * 179.97438 * 7 6 5 9 9 C 1.39924 * 119.95668 * 359.96828 * 8 7 6 10 10 C 1.36424 * 120.28147 * 179.74262 * 9 8 7 11 11 C 1.39877 * 120.18206 * 0.56373 * 10 9 8 12 12 C 1.47299 * 120.04201 * 179.71536 * 11 10 9 13 13 O 1.21628 * 119.99693 * 179.72798 * 12 11 10 14 14 N 1.34778 * 120.00332 * 359.72423 * 12 11 10 15 15 C 1.46498 * 120.00084 * 180.02562 * 14 12 11 16 16 C 1.52998 * 109.47009 * 180.02562 * 15 14 12 17 17 H 1.08998 * 112.85151 * 43.80768 * 16 15 14 18 18 C 1.53781 * 113.61293 * 175.00083 * 16 15 14 19 19 C 1.53786 * 87.17350 * 89.15989 * 18 16 15 20 20 O 1.42907 * 113.61055 * 270.92744 * 19 18 16 21 21 C 1.52990 * 113.61464 * 140.02626 * 19 18 16 22 22 F 1.39897 * 109.47425 * 59.99764 * 21 19 18 23 23 F 1.39900 * 109.47354 * 179.97438 * 21 19 18 24 24 F 1.39899 * 109.47234 * 299.99577 * 21 19 18 25 25 C 1.53781 * 113.69014 * 272.53464 * 16 15 14 26 26 C 1.40407 * 119.90832 * 359.43993 * 11 10 9 27 27 O 1.35679 * 120.13492 * 180.25079 * 26 11 10 28 28 C 1.38276 * 119.72355 * 0.27725 * 26 11 10 29 29 O 1.34230 * 125.65789 * 245.29058 * 4 2 1 30 30 H 0.96705 * 113.99916 * 60.00628 * 1 2 3 31 31 H 1.08992 * 109.47628 * 239.99530 * 2 1 3 32 32 H 1.48498 * 110.00251 * 59.99372 * 3 2 1 33 33 H 1.48497 * 110.00348 * 181.31555 * 3 2 1 34 34 H 1.07999 * 126.47387 * 0.02562 * 5 4 2 35 35 H 1.08001 * 126.63117 * 179.97438 * 6 5 4 36 36 H 1.08004 * 119.85746 * 0.02562 * 9 8 7 37 37 H 1.08001 * 119.90947 * 180.28193 * 10 9 8 38 38 H 0.96997 * 119.99352 * 0.02562 * 14 12 11 39 39 H 1.09004 * 109.46967 * 60.00256 * 15 14 12 40 40 H 1.08994 * 109.46938 * 300.00263 * 15 14 12 41 41 H 1.09002 * 113.61445 * 203.74988 * 18 16 15 42 42 H 1.09002 * 113.61408 * 334.56719 * 18 16 15 43 43 H 0.96698 * 113.99817 * 179.97438 * 20 19 18 44 44 H 1.09005 * 113.61471 * 25.42550 * 25 16 15 45 45 H 1.08996 * 113.61178 * 156.23892 * 25 16 15 46 46 H 0.96706 * 113.99344 * 90.00422 * 27 26 11 47 47 H 1.08000 * 120.08739 * 180.02562 * 28 26 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7103 1.2306 5 6 1.7566 -2.0179 1.5096 6 6 2.3798 -2.2625 2.7482 7 6 2.9063 -1.0779 3.1628 8 6 3.6541 -0.8532 4.4149 9 6 3.8739 -1.9162 5.2978 10 6 4.5689 -1.7171 6.4547 11 6 5.0568 -0.4452 6.7720 12 6 5.8014 -0.2324 8.0250 13 8 6.2295 0.8729 8.2976 14 7 6.0082 -1.2623 8.8693 15 6 6.7483 -1.0505 10.1157 16 6 6.8414 -2.3702 10.8841 17 1 7.0891 -3.2165 10.2435 18 6 7.7058 -2.2845 12.1531 19 6 6.4273 -1.8779 12.9047 20 8 6.1906 -0.4686 12.9109 21 6 6.3061 -2.5082 14.2935 22 9 7.3949 -2.1169 15.0799 23 9 5.1183 -2.0816 14.8972 24 9 6.2944 -3.9020 14.1736 25 6 5.6434 -2.6304 11.8127 26 6 4.8407 0.6271 5.8917 27 8 5.3163 1.8617 6.1924 28 6 4.1408 0.4198 4.7173 29 8 2.6219 -0.1450 2.2332 30 1 -0.3933 0.4416 -0.7651 31 1 1.7923 -0.5139 -0.8898 32 1 1.5614 2.4680 1.2084 33 1 3.5345 1.7703 -0.0320 34 1 1.2369 -2.7409 0.8984 35 1 2.4297 -3.2073 3.2690 36 1 3.4956 -2.8996 5.0602 37 1 4.7390 -2.5429 7.1297 38 1 5.6670 -2.1438 8.6516 39 1 6.2293 -0.3106 10.7251 40 1 7.7519 -0.6927 9.8860 41 1 8.1121 -3.2450 12.4704 42 1 8.4593 -1.4978 12.1158 43 1 5.3877 -0.2066 13.3818 44 1 4.7310 -2.1219 11.5011 45 1 5.4849 -3.6854 12.0357 46 1 6.2099 2.0299 5.8630 47 1 3.9716 1.2403 4.0358 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17664666_12807986.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:14:52 Heat of formation + Delta-G solvation = -228.062300 kcal Electronic energy + Delta-G solvation = -38767.783581 eV Core-core repulsion = 32856.614703 eV Total energy + Delta-G solvation = -5911.168878 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 414.121 amu Computer time = 3.60 seconds Orbital eigenvalues (eV) -51.24766 -48.79165 -48.73274 -43.87503 -41.74335 -41.04340 -39.63052 -38.11675 -37.83442 -36.61672 -35.26641 -34.38018 -33.54902 -31.49011 -30.82689 -29.81631 -27.58549 -27.10121 -26.50307 -24.38551 -24.14761 -23.41954 -22.51832 -21.96920 -21.39600 -20.72457 -20.06699 -19.75295 -19.53402 -19.38784 -18.69609 -18.65291 -18.10336 -17.52282 -17.18894 -17.13620 -16.72098 -16.38345 -16.35221 -16.28225 -16.02360 -15.88460 -15.62804 -15.55120 -15.40758 -15.17676 -15.14588 -14.91779 -14.87633 -14.68254 -14.50014 -14.47634 -14.33330 -14.21530 -14.01120 -13.98578 -13.65579 -13.58888 -13.46571 -12.97967 -12.82774 -12.73843 -12.46069 -12.27391 -12.12269 -11.99563 -11.59515 -11.24684 -11.19403 -10.96087 -10.79602 -10.46268 -10.15305 -10.05286 -9.11340 -5.15363 -0.89313 0.03794 0.52340 1.11628 1.30853 1.49881 1.53109 1.58311 1.85099 1.95861 1.97251 2.46897 2.55807 2.59424 2.69112 2.90793 2.92314 3.19551 3.35155 3.41564 3.48980 3.53691 3.62520 3.69551 3.72363 3.80782 3.89392 3.91151 4.11893 4.26559 4.34849 4.37649 4.47762 4.53105 4.54239 4.59453 4.68969 4.73503 4.78075 4.80044 4.86990 4.89202 4.97284 5.00768 5.10326 5.14217 5.34730 5.35957 5.45067 5.85700 6.27100 6.44448 6.59021 6.80746 7.13786 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.560 6.560 2 C -0.034 4.034 3 Si 0.799 3.201 4 C -0.032 4.032 5 C -0.174 4.174 6 C -0.166 4.166 7 C -0.005 4.005 8 C 0.022 3.978 9 C -0.106 4.106 10 C -0.046 4.046 11 C -0.176 4.176 12 C 0.555 3.445 13 O -0.565 6.565 14 N -0.707 5.707 15 C 0.133 3.867 16 C -0.099 4.099 17 H 0.128 0.872 18 C -0.112 4.112 19 C 0.056 3.944 20 O -0.523 6.523 21 C 0.430 3.570 22 F -0.188 7.188 23 F -0.189 7.189 24 F -0.175 7.175 25 C -0.144 4.144 26 C 0.160 3.840 27 O -0.496 6.496 28 C -0.162 4.162 29 O -0.198 6.198 30 H 0.414 0.586 31 H 0.130 0.870 32 H -0.313 1.313 33 H -0.295 1.295 34 H 0.177 0.823 35 H 0.192 0.808 36 H 0.175 0.825 37 H 0.181 0.819 38 H 0.416 0.584 39 H 0.071 0.929 40 H 0.061 0.939 41 H 0.128 0.872 42 H 0.090 0.910 43 H 0.400 0.600 44 H 0.095 0.905 45 H 0.123 0.877 46 H 0.408 0.592 47 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.602 -8.410 -6.975 11.043 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.371 6.371 2 C -0.144 4.144 3 Si 0.706 3.294 4 C -0.081 4.081 5 C -0.193 4.193 6 C -0.185 4.185 7 C -0.054 4.054 8 C 0.021 3.979 9 C -0.124 4.124 10 C -0.064 4.064 11 C -0.179 4.179 12 C 0.343 3.657 13 O -0.445 6.445 14 N -0.361 5.361 15 C 0.010 3.990 16 C -0.118 4.118 17 H 0.146 0.854 18 C -0.149 4.149 19 C 0.012 3.988 20 O -0.331 6.331 21 C 0.376 3.624 22 F -0.170 7.170 23 F -0.171 7.171 24 F -0.156 7.156 25 C -0.182 4.182 26 C 0.113 3.887 27 O -0.309 6.309 28 C -0.180 4.180 29 O -0.097 6.097 30 H 0.267 0.733 31 H 0.148 0.852 32 H -0.242 1.242 33 H -0.223 1.223 34 H 0.195 0.805 35 H 0.209 0.791 36 H 0.193 0.807 37 H 0.198 0.802 38 H 0.255 0.745 39 H 0.089 0.911 40 H 0.080 0.920 41 H 0.146 0.854 42 H 0.108 0.892 43 H 0.252 0.748 44 H 0.113 0.887 45 H 0.142 0.858 46 H 0.268 0.732 47 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges -0.636 -6.965 -5.815 9.095 hybrid contribution -0.185 -0.235 0.862 0.913 sum -0.821 -7.200 -4.953 8.777 Atomic orbital electron populations 1.86413 1.16057 1.82507 1.52170 1.23897 0.86503 1.11160 0.92868 0.94474 0.76983 0.74313 0.83653 1.22231 1.00578 0.93780 0.91515 1.21916 1.03397 0.95579 0.98416 1.22329 1.00260 0.98849 0.97013 1.20764 1.05247 0.88115 0.91289 1.18016 0.95425 0.94054 0.90363 1.21097 0.99154 0.99258 0.92875 1.21246 0.93450 0.95128 0.96581 1.20536 1.05406 0.95203 0.96777 1.18160 0.79480 0.84371 0.83726 1.90839 1.51882 1.25439 1.76322 1.45692 1.57095 1.12269 1.21007 1.21241 0.96564 0.97287 0.83946 1.22281 0.95999 0.97971 0.95543 0.85401 1.23235 0.94243 1.04172 0.93292 1.23908 1.03906 0.84014 0.86946 1.86639 1.50255 1.17903 1.78333 1.21614 0.73318 0.77294 0.90207 1.93199 1.55434 1.90735 1.77623 1.93173 1.48213 1.89645 1.86023 1.93177 1.96135 1.30235 1.96075 1.23870 0.98622 1.02567 0.93103 1.18473 0.94643 0.84376 0.91167 1.84730 1.37273 1.28639 1.80284 1.21484 1.01873 0.97537 0.97135 1.83956 1.59038 1.39318 1.27390 0.73296 0.85218 1.24182 1.22258 0.80521 0.79107 0.80738 0.80179 0.74532 0.91109 0.92039 0.85410 0.89159 0.74794 0.88667 0.85845 0.73164 0.85998 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 1.04 12.86 -148.98 -1.92 -0.87 16 2 C -0.03 0.05 2.97 71.24 0.21 0.26 16 3 Si 0.80 -0.15 32.11 68.60 2.20 2.06 16 4 C -0.03 -0.18 6.24 24.91 0.16 -0.03 16 5 C -0.17 -0.42 10.78 22.12 0.24 -0.18 16 6 C -0.17 -0.16 10.25 22.40 0.23 0.07 16 7 C -0.01 -0.03 7.02 24.24 0.17 0.14 16 8 C 0.02 0.08 5.87 -20.08 -0.12 -0.03 16 9 C -0.11 0.41 9.48 22.25 0.21 0.62 16 10 C -0.05 0.23 9.47 22.24 0.21 0.44 16 11 C -0.18 -0.57 5.89 -19.97 -0.12 -0.69 16 12 C 0.55 3.19 7.75 86.63 0.67 3.86 16 13 O -0.57 -8.64 15.14 16.87 0.26 -8.38 16 14 N -0.71 2.06 5.50 -466.49 -2.57 -0.51 16 15 C 0.13 -0.23 5.26 86.38 0.45 0.23 16 16 C -0.10 0.84 3.94 -10.27 -0.04 0.80 16 17 H 0.13 -1.72 8.14 -2.39 -0.02 -1.74 16 18 C -0.11 0.66 6.85 31.12 0.21 0.87 16 19 C 0.06 -0.20 1.37 -10.18 -0.01 -0.22 16 20 O -0.52 0.51 11.45 -148.98 -1.71 -1.19 16 21 C 0.43 -0.06 2.86 71.98 0.21 0.14 16 22 F -0.19 -0.76 17.18 44.97 0.77 0.02 16 23 F -0.19 -0.28 16.65 44.97 0.75 0.47 16 24 F -0.17 0.10 15.77 44.97 0.71 0.81 16 25 C -0.14 1.19 6.92 31.21 0.22 1.41 16 26 C 0.16 1.26 6.71 22.81 0.15 1.42 16 27 O -0.50 -5.26 11.56 -68.98 -0.80 -6.06 16 28 C -0.16 -1.23 9.65 22.61 0.22 -1.01 16 29 O -0.20 -2.01 8.79 -6.00 -0.05 -2.06 16 30 H 0.41 -5.55 8.74 -74.05 -0.65 -6.20 16 31 H 0.13 -1.05 7.96 -2.39 -0.02 -1.07 16 32 H -0.31 -3.28 7.11 99.48 0.71 -2.57 16 33 H -0.30 -1.94 7.11 99.48 0.71 -1.23 16 34 H 0.18 -0.42 8.06 -2.91 -0.02 -0.44 16 35 H 0.19 -1.32 7.24 -2.91 -0.02 -1.34 16 36 H 0.18 -1.93 6.95 -2.91 -0.02 -1.95 16 37 H 0.18 -2.59 6.38 -2.91 -0.02 -2.60 16 38 H 0.42 -4.48 6.48 -92.71 -0.60 -5.09 16 39 H 0.07 0.22 6.13 -2.38 -0.01 0.21 16 40 H 0.06 0.09 8.14 -2.39 -0.02 0.07 16 41 H 0.13 -1.13 7.88 -2.39 -0.02 -1.15 16 42 H 0.09 -0.33 8.10 -2.39 -0.02 -0.35 16 43 H 0.40 -2.39 8.43 -74.06 -0.62 -3.01 16 44 H 0.09 -0.77 8.10 -2.38 -0.02 -0.79 16 45 H 0.12 -1.32 7.15 -2.39 -0.02 -1.33 16 46 H 0.41 1.33 9.06 -74.05 -0.67 0.66 16 47 H 0.12 1.19 7.90 -2.91 -0.02 1.17 16 Total: 0.00 -35.94 411.35 -0.46 -36.40 By element: Atomic # 1 Polarization: -27.39 SS G_CDS: -1.38 Total: -28.77 kcal Atomic # 6 Polarization: 4.82 SS G_CDS: 3.27 Total: 8.09 kcal Atomic # 7 Polarization: 2.06 SS G_CDS: -2.57 Total: -0.51 kcal Atomic # 8 Polarization: -14.35 SS G_CDS: -4.22 Total: -18.57 kcal Atomic # 9 Polarization: -0.93 SS G_CDS: 2.23 Total: 1.30 kcal Atomic # 14 Polarization: -0.15 SS G_CDS: 2.20 Total: 2.06 kcal Total: -35.94 -0.46 -36.40 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664666_12807986.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -191.662 kcal (2) G-P(sol) polarization free energy of solvation -35.937 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -227.599 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.464 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.400 kcal (6) G-S(sol) free energy of system = (1) + (5) -228.062 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 3.61 seconds