Wall clock time and date at job start Sun Mar 7 2021 10:17:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.35999 * 117.00223 * 2 1 4 4 C 1.39144 * 120.07724 * 179.97438 * 3 2 1 5 5 O 1.35993 * 120.07296 * 359.97438 * 4 3 2 6 6 C 1.42906 * 117.00336 * 179.73022 * 5 4 3 7 7 C 1.50700 * 109.47236 * 179.97438 * 6 5 4 8 8 O 1.21288 * 120.00070 * 359.97438 * 7 6 5 9 9 N 1.34770 * 119.99928 * 179.97438 * 7 6 5 10 10 C 1.46502 * 120.00264 * 180.02562 * 9 7 6 11 11 C 1.52993 * 109.47344 * 179.97438 * 10 9 7 12 12 H 1.08998 * 112.85122 * 316.19284 * 11 10 9 13 13 C 1.53775 * 113.61715 * 87.50364 * 11 10 9 14 14 C 1.53775 * 87.08439 * 89.11584 * 13 11 10 15 15 O 1.42905 * 113.61522 * 270.88690 * 14 13 11 16 16 C 1.53000 * 113.69292 * 139.99409 * 14 13 11 17 17 F 1.39906 * 109.47007 * 200.93659 * 16 14 13 18 18 F 1.39902 * 109.47137 * 320.93448 * 16 14 13 19 19 F 1.39896 * 109.47041 * 80.93902 * 16 14 13 20 20 C 1.53781 * 87.08212 * 25.43385 * 14 13 11 21 21 C 1.38571 * 119.85566 * 179.72339 * 4 3 2 22 22 C 1.38237 * 119.99882 * 0.27820 * 21 4 3 23 23 N 1.47999 * 119.92805 * 179.97438 * 22 21 4 24 24 O 1.21805 * 119.99993 * 359.97438 * 23 22 21 25 25 O 1.21803 * 120.00185 * 179.97438 * 23 22 21 26 26 C 1.38252 * 120.14530 * 359.97248 * 22 21 4 27 27 C 1.50703 * 119.92420 * 180.02562 * 26 22 21 28 28 O 1.42902 * 109.47077 * 75.00350 * 27 26 22 29 29 Si 1.86304 * 109.46881 * 194.99998 * 27 26 22 30 30 C 1.38240 * 120.14911 * 0.02562 * 26 22 21 31 31 H 1.09001 * 109.47231 * 179.97438 * 1 2 3 32 32 H 1.08994 * 109.47440 * 300.00488 * 1 2 3 33 33 H 1.09009 * 109.47013 * 60.00319 * 1 2 3 34 34 H 1.09003 * 109.46674 * 59.99733 * 6 5 4 35 35 H 1.08999 * 109.46765 * 300.00129 * 6 5 4 36 36 H 0.97003 * 120.00106 * 359.97438 * 9 7 6 37 37 H 1.09002 * 109.46824 * 59.99583 * 10 9 7 38 38 H 1.08999 * 109.47205 * 299.99900 * 10 9 7 39 39 H 1.09002 * 113.61158 * 334.56210 * 13 11 10 40 40 H 1.09003 * 113.61480 * 203.66291 * 13 11 10 41 41 H 0.96696 * 114.00036 * 277.49594 * 15 14 13 42 42 H 1.08995 * 113.61520 * 89.11822 * 20 14 13 43 43 H 1.08999 * 113.61453 * 219.93578 * 20 14 13 44 44 H 1.08003 * 120.00026 * 180.24685 * 21 4 3 45 45 H 1.08994 * 109.47098 * 314.99937 * 27 26 22 46 46 H 0.96693 * 113.99946 * 59.99758 * 28 27 26 47 47 H 1.48495 * 109.99922 * 58.68289 * 29 27 26 48 48 H 1.48505 * 109.99705 * 179.97438 * 29 27 26 49 49 H 1.08001 * 120.00548 * 179.97438 * 30 26 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4359 1.2864 0.0005 5 8 4.1795 0.1478 0.0016 6 6 5.6003 0.3007 -0.0039 7 6 6.2519 -1.0581 -0.0012 8 8 5.5670 -2.0591 0.0053 9 7 7.5956 -1.1611 -0.0060 10 6 8.2291 -2.4821 -0.0039 11 6 9.7502 -2.3183 -0.0110 12 1 10.0905 -1.5548 -0.7105 13 6 10.3621 -2.1863 1.3936 14 6 10.4740 -3.7199 1.4034 15 8 9.3126 -4.3753 1.9170 16 6 11.7723 -4.2377 2.0257 17 9 12.0148 -5.5419 1.5811 18 9 12.8343 -3.4103 1.6450 19 9 11.6550 -4.2345 3.4197 20 6 10.5125 -3.6484 -0.1322 21 6 4.0602 2.5234 -0.0053 22 6 3.3029 3.6799 -0.0058 23 7 3.9714 5.0003 -0.0114 24 8 5.1876 5.0672 -0.0151 25 8 3.3054 6.0201 -0.0123 26 6 1.9224 3.6057 -0.0010 27 6 1.1016 4.8697 -0.0022 28 8 1.1303 5.4551 -1.3055 29 14 -0.6580 4.4678 0.4594 30 6 1.2932 2.3748 0.0047 31 1 -0.3634 -1.0277 -0.0005 32 1 -0.3634 0.5139 0.8899 33 1 -0.3633 0.5138 -0.8901 34 1 5.9096 0.8534 0.8832 35 1 5.9034 0.8476 -0.8967 36 1 8.1434 -0.3606 -0.0116 37 1 7.9194 -3.0349 -0.8908 38 1 7.9263 -3.0289 0.8891 39 1 9.6681 -1.7942 2.1371 40 1 11.3264 -1.6781 1.4038 41 1 9.2826 -4.4234 2.8823 42 1 11.5178 -3.5401 -0.5392 43 1 9.9411 -4.4378 -0.6205 44 1 5.1386 2.5841 -0.0089 45 1 1.5155 5.5723 0.7210 46 1 0.7762 4.8842 -2.0009 47 1 -0.6984 3.8292 1.7994 48 1 -1.4777 5.7061 0.4624 49 1 0.2146 2.3196 0.0088 There are 80 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 80 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17664666_4549636.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:17:13 Heat of formation + Delta-G solvation = -265.684082 kcal Electronic energy + Delta-G solvation = -43545.351634 eV Core-core repulsion = 37030.675719 eV Total energy + Delta-G solvation = -6514.675914 eV No. of doubly occupied orbitals = 80 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 437.131 amu Computer time = 1.76 seconds Orbital eigenvalues (eV) -51.24385 -48.78826 -48.73005 -43.39519 -42.10838 -41.41556 -40.64837 -39.55218 -39.17554 -37.73376 -37.13321 -36.63606 -35.24535 -32.67500 -32.57294 -30.88221 -29.31620 -28.72137 -27.91090 -27.11575 -26.78855 -25.70513 -23.89683 -23.41341 -23.15821 -21.82071 -20.76205 -20.64071 -20.05451 -19.83089 -19.53383 -19.49708 -19.39263 -18.70096 -18.63524 -18.36188 -17.76439 -17.60729 -17.40196 -17.18779 -16.88549 -16.76316 -16.38205 -16.19817 -16.08409 -16.03461 -15.63297 -15.59418 -15.42135 -15.18522 -15.17501 -14.95744 -14.90805 -14.83560 -14.65451 -14.48423 -14.38921 -14.10792 -13.89498 -13.81013 -13.49786 -13.43370 -13.03225 -12.98337 -12.66492 -12.49363 -12.44887 -12.42960 -12.31917 -12.26627 -12.21101 -12.12232 -11.77662 -11.59560 -11.23204 -11.01721 -10.53010 -10.45280 -10.18943 -9.48223 -5.13356 -1.35890 -0.42709 0.16945 0.31120 1.13198 1.25099 1.41290 1.53601 1.57467 1.90397 1.90683 1.94074 2.32022 2.48270 2.59928 2.69381 2.92528 2.98678 3.17757 3.27869 3.34988 3.41230 3.47778 3.52118 3.56153 3.63525 3.79620 3.90123 3.95141 3.96375 4.06868 4.12055 4.23236 4.37845 4.39809 4.42080 4.47834 4.54022 4.55590 4.73350 4.74338 4.78559 4.82577 4.86940 4.89933 5.11616 5.25718 5.33027 5.59601 6.07065 6.27927 6.40582 6.47276 6.71958 7.09724 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.004 4.004 2 O -0.307 6.307 3 C 0.171 3.829 4 C 0.101 3.899 5 O -0.291 6.291 6 C 0.027 3.973 7 C 0.515 3.485 8 O -0.568 6.568 9 N -0.706 5.706 10 C 0.133 3.867 11 C -0.099 4.099 12 H 0.127 0.873 13 C -0.144 4.144 14 C 0.057 3.943 15 O -0.522 6.522 16 C 0.429 3.571 17 F -0.189 7.189 18 F -0.176 7.176 19 F -0.189 7.189 20 C -0.113 4.113 21 C -0.109 4.109 22 C -0.046 4.046 23 N 0.036 4.964 24 O -0.185 6.185 25 O -0.168 6.168 26 C -0.040 4.040 27 C -0.091 4.091 28 O -0.536 6.536 29 Si 0.786 3.214 30 C -0.163 4.163 31 H 0.121 0.879 32 H 0.080 0.920 33 H 0.093 0.907 34 H 0.128 0.872 35 H 0.130 0.870 36 H 0.422 0.578 37 H 0.061 0.939 38 H 0.074 0.926 39 H 0.098 0.902 40 H 0.120 0.880 41 H 0.400 0.600 42 H 0.126 0.874 43 H 0.091 0.909 44 H 0.184 0.816 45 H 0.115 0.885 46 H 0.393 0.607 47 H -0.272 1.272 48 H -0.291 1.291 49 H 0.194 0.806 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.041 -1.527 -2.028 3.257 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.098 4.098 2 O -0.219 6.219 3 C 0.122 3.878 4 C 0.053 3.947 5 O -0.204 6.204 6 C -0.050 4.050 7 C 0.300 3.700 8 O -0.446 6.446 9 N -0.361 5.361 10 C 0.010 3.990 11 C -0.118 4.118 12 H 0.145 0.855 13 C -0.182 4.182 14 C 0.014 3.986 15 O -0.330 6.330 16 C 0.374 3.626 17 F -0.170 7.170 18 F -0.157 7.157 19 F -0.170 7.170 20 C -0.151 4.151 21 C -0.129 4.129 22 C -0.130 4.130 23 N 0.548 4.452 24 O -0.396 6.396 25 O -0.381 6.381 26 C -0.043 4.043 27 C -0.199 4.199 28 O -0.343 6.343 29 Si 0.688 3.312 30 C -0.181 4.181 31 H 0.139 0.861 32 H 0.098 0.902 33 H 0.112 0.888 34 H 0.145 0.855 35 H 0.147 0.853 36 H 0.260 0.740 37 H 0.080 0.920 38 H 0.092 0.908 39 H 0.116 0.884 40 H 0.138 0.862 41 H 0.253 0.747 42 H 0.144 0.856 43 H 0.109 0.891 44 H 0.201 0.799 45 H 0.132 0.868 46 H 0.242 0.758 47 H -0.198 1.198 48 H -0.218 1.218 49 H 0.210 0.790 Dipole moment (debyes) X Y Z Total from point charges -3.288 -2.742 -1.731 4.618 hybrid contribution 1.718 0.879 1.188 2.266 sum -1.570 -1.864 -0.543 2.497 Atomic orbital electron populations 1.23809 0.74705 1.07055 1.04182 1.86335 1.24845 1.24518 1.86186 1.18684 0.89190 0.86376 0.93571 1.17964 0.88820 0.85121 1.02758 1.86306 1.18538 1.26803 1.88705 1.22918 0.78756 0.96058 1.07317 1.20302 0.83072 0.90392 0.76226 1.90797 1.64021 1.39891 1.49918 1.45619 1.05121 1.10623 1.74701 1.21248 0.91028 0.83842 1.02874 1.22280 0.92505 0.98854 0.98123 0.85533 1.23817 1.04412 0.91232 0.98715 1.23851 0.81072 0.95605 0.98091 1.86633 1.38124 1.79529 1.28754 1.21660 0.88658 0.75732 0.76505 1.93201 1.95396 1.39345 1.89079 1.93179 1.59824 1.71822 1.90913 1.93174 1.96106 1.96304 1.31440 1.23243 1.03728 0.98786 0.89330 1.20907 1.03030 0.88101 1.00868 1.20554 0.92754 0.81921 1.17801 1.43722 1.00828 1.03445 0.97157 1.94499 0.96507 1.94120 1.54448 1.94580 1.64416 1.25420 1.53657 1.20220 0.91090 0.97640 0.95305 1.25757 1.10553 0.92821 0.90774 1.86668 1.87029 1.44627 1.15982 0.94400 0.71839 0.82174 0.82749 1.21082 1.01767 0.88098 1.07198 0.86116 0.90190 0.88827 0.85464 0.85278 0.74018 0.92027 0.90812 0.88379 0.86154 0.74737 0.85599 0.89068 0.79871 0.86811 0.75803 1.19791 1.21810 0.78991 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 0.04 9.81 113.37 1.11 1.16 16 2 O -0.31 0.22 10.28 -79.68 -0.82 -0.59 16 3 C 0.17 -0.27 6.70 22.57 0.15 -0.12 16 4 C 0.10 -0.01 6.70 22.57 0.15 0.14 16 5 O -0.29 -0.75 9.45 -67.06 -0.63 -1.38 16 6 C 0.03 -0.15 5.22 71.24 0.37 0.23 16 7 C 0.51 0.21 7.91 87.66 0.69 0.90 16 8 O -0.57 -7.01 16.50 15.98 0.26 -6.75 16 9 N -0.71 4.81 5.56 -463.07 -2.57 2.24 16 10 C 0.13 -0.55 5.26 86.38 0.45 -0.10 16 11 C -0.10 0.97 3.94 -10.27 -0.04 0.93 16 12 H 0.13 -1.81 8.14 -2.39 -0.02 -1.83 16 13 C -0.14 1.37 6.91 31.12 0.22 1.58 16 14 C 0.06 -0.27 1.34 -10.27 -0.01 -0.29 16 15 O -0.52 1.43 11.44 -148.98 -1.70 -0.27 16 16 C 0.43 -0.38 2.84 71.98 0.20 -0.18 16 17 F -0.19 -0.64 17.20 44.97 0.77 0.14 16 18 F -0.18 0.16 15.75 44.97 0.71 0.87 16 19 F -0.19 -0.11 16.69 44.97 0.75 0.64 16 20 C -0.11 0.78 6.88 31.12 0.21 0.99 16 21 C -0.11 0.15 8.54 22.35 0.19 0.34 16 22 C -0.05 -0.13 6.84 36.38 0.25 0.12 16 23 N 0.04 0.32 4.45 -46.47 -0.21 0.11 16 24 O -0.18 -1.82 18.44 18.88 0.35 -1.47 16 25 O -0.17 -2.08 14.62 25.10 0.37 -1.71 16 26 C -0.04 0.04 5.26 -19.86 -0.10 -0.06 16 27 C -0.09 0.02 1.74 71.24 0.12 0.15 16 28 O -0.54 -0.45 11.80 -129.63 -1.53 -1.97 16 29 Si 0.79 -4.36 29.91 68.60 2.05 -2.31 16 30 C -0.16 0.93 7.65 22.35 0.17 1.10 16 31 H 0.12 -1.41 8.14 -2.39 -0.02 -1.43 16 32 H 0.08 -1.07 7.65 -2.39 -0.02 -1.08 16 33 H 0.09 -1.45 7.67 -2.38 -0.02 -1.46 16 34 H 0.13 -1.44 7.66 -2.39 -0.02 -1.46 16 35 H 0.13 -1.49 7.66 -2.39 -0.02 -1.51 16 36 H 0.42 -6.12 8.47 -92.71 -0.79 -6.91 16 37 H 0.06 -0.04 8.14 -2.39 -0.02 -0.06 16 38 H 0.07 0.02 6.12 -2.39 -0.01 0.01 16 39 H 0.10 -0.97 8.10 -2.39 -0.02 -0.99 16 40 H 0.12 -1.34 7.18 -2.39 -0.02 -1.35 16 41 H 0.40 -3.15 8.46 -74.06 -0.63 -3.78 16 42 H 0.13 -1.17 7.83 -2.39 -0.02 -1.19 16 43 H 0.09 -0.43 8.10 -2.39 -0.02 -0.45 16 44 H 0.18 -1.12 5.85 -2.91 -0.02 -1.14 16 45 H 0.11 0.52 6.07 -2.39 -0.01 0.51 16 46 H 0.39 -3.60 8.70 -74.06 -0.64 -4.24 16 47 H -0.27 0.59 7.11 99.48 0.71 1.30 16 48 H -0.29 -0.75 7.11 99.48 0.71 -0.05 16 49 H 0.19 -2.48 3.36 -2.91 -0.01 -2.49 16 Total: 0.00 -36.25 423.18 1.04 -35.22 By element: Atomic # 1 Polarization: -28.71 SS G_CDS: -0.90 Total: -29.62 kcal Atomic # 6 Polarization: 2.74 SS G_CDS: 4.14 Total: 6.88 kcal Atomic # 7 Polarization: 5.13 SS G_CDS: -2.78 Total: 2.35 kcal Atomic # 8 Polarization: -10.45 SS G_CDS: -3.71 Total: -14.16 kcal Atomic # 9 Polarization: -0.59 SS G_CDS: 2.23 Total: 1.64 kcal Atomic # 14 Polarization: -4.36 SS G_CDS: 2.05 Total: -2.31 kcal Total: -36.25 1.04 -35.22 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664666_4549636.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -230.468 kcal (2) G-P(sol) polarization free energy of solvation -36.252 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -266.720 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.036 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.216 kcal (6) G-S(sol) free energy of system = (1) + (5) -265.684 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.76 seconds