Wall clock time and date at job start Sun Mar 7 2021 10:17:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.46997 * 2 1 4 4 C 1.50694 * 109.47118 * 120.00721 * 2 1 3 5 5 C 1.38246 * 119.93985 * 244.99781 * 4 2 1 6 6 C 1.38171 * 120.05565 * 180.02562 * 5 4 2 7 7 C 1.38711 * 119.94287 * 359.97438 * 6 5 4 8 8 O 1.35891 * 120.05941 * 180.02562 * 7 6 5 9 9 C 1.42908 * 116.99781 * 359.97438 * 8 7 6 10 10 C 1.50699 * 109.47146 * 180.02562 * 9 8 7 11 11 O 1.21276 * 119.99976 * 0.02562 * 10 9 8 12 12 N 1.34779 * 119.99983 * 180.02562 * 10 9 8 13 13 C 1.46500 * 119.99948 * 180.02562 * 12 10 9 14 14 C 1.52997 * 109.46889 * 180.02562 * 13 12 10 15 15 H 1.09003 * 112.85394 * 316.19566 * 14 13 12 16 16 C 1.53786 * 113.61546 * 87.50067 * 14 13 12 17 17 C 1.53788 * 87.07974 * 89.11701 * 16 14 13 18 18 O 1.42903 * 113.68602 * 270.87235 * 17 16 14 19 19 C 1.53001 * 113.61236 * 139.98223 * 17 16 14 20 20 F 1.39892 * 109.47326 * 322.50058 * 19 17 16 21 21 F 1.39894 * 109.46911 * 82.50349 * 19 17 16 22 22 F 1.39899 * 109.46645 * 202.50173 * 19 17 16 23 23 C 1.53779 * 113.61605 * 184.99891 * 14 13 12 24 24 C 1.38759 * 119.88574 * 0.02562 * 7 6 5 25 25 N 1.48003 * 120.02452 * 179.97438 * 24 7 6 26 26 O 1.21796 * 120.00043 * 180.02562 * 25 24 7 27 27 O 1.21803 * 120.00472 * 0.02562 * 25 24 7 28 28 C 1.38121 * 119.94744 * 359.72772 * 24 7 6 29 29 H 0.96708 * 114.00246 * 59.99398 * 1 2 3 30 30 H 1.09004 * 109.46690 * 240.00803 * 2 1 3 31 31 H 1.48506 * 109.99834 * 60.00805 * 3 2 1 32 32 H 1.48502 * 110.00011 * 181.32069 * 3 2 1 33 33 H 1.08002 * 119.97645 * 0.02562 * 5 4 2 34 34 H 1.07989 * 120.02539 * 180.02562 * 6 5 4 35 35 H 1.08994 * 109.47020 * 300.00018 * 9 8 7 36 36 H 1.09001 * 109.46692 * 59.99856 * 9 8 7 37 37 H 0.96998 * 119.99936 * 0.02562 * 12 10 9 38 38 H 1.09002 * 109.46769 * 299.99969 * 13 12 10 39 39 H 1.08993 * 109.46992 * 59.99937 * 13 12 10 40 40 H 1.08998 * 113.61408 * 203.66282 * 16 14 13 41 41 H 1.08996 * 113.61574 * 334.57013 * 16 14 13 42 42 H 0.96698 * 113.99777 * 277.53497 * 18 17 16 43 43 H 1.09002 * 113.61123 * 25.42959 * 23 14 13 44 44 H 1.08997 * 113.61715 * 156.25186 * 23 14 13 45 45 H 1.07999 * 119.97302 * 180.29068 * 28 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7105 1.2303 5 6 2.6387 -0.0113 2.1905 6 6 3.1008 -0.6605 3.3192 7 6 2.8540 -2.0149 3.4888 8 8 3.3070 -2.6556 4.5982 9 6 4.0311 -1.8726 5.5494 10 6 4.4509 -2.7460 6.7035 11 8 4.1592 -3.9231 6.7106 12 7 5.1506 -2.2189 7.7278 13 6 5.5592 -3.0681 8.8495 14 6 6.3332 -2.2294 9.8685 15 1 7.0568 -1.5599 9.4034 16 6 5.4346 -1.5410 10.9095 17 6 5.5835 -2.8118 11.7627 18 8 4.5924 -3.8049 11.4912 19 6 5.7491 -2.5306 13.2574 20 9 6.5352 -1.3868 13.4325 21 9 4.4917 -2.3251 13.8353 22 9 6.3716 -3.6227 13.8712 23 6 6.9140 -3.0529 11.0301 24 6 2.1438 -2.7144 2.5236 25 7 1.8792 -4.1597 2.7011 26 8 1.2561 -4.7734 1.8534 27 8 2.2845 -4.7356 3.6949 28 6 1.6796 -2.0597 1.3994 29 1 -0.3934 0.4418 -0.7650 30 1 1.7923 -0.5137 -0.8901 31 1 1.5616 2.4678 1.2086 32 1 3.5346 1.7703 -0.0322 33 1 2.8303 1.0434 2.0582 34 1 3.6530 -0.1137 4.0691 35 1 4.9159 -1.4498 5.0736 36 1 3.3953 -1.0666 5.9157 37 1 5.3836 -1.2773 7.7223 38 1 4.6748 -3.4920 9.3252 39 1 6.1956 -3.8732 8.4826 40 1 5.8864 -0.6573 11.3600 41 1 4.4169 -1.3662 10.5605 42 1 3.7534 -3.6586 11.9491 43 1 7.0905 -4.0987 10.7784 44 1 7.7710 -2.5832 11.5127 45 1 1.1227 -2.6027 0.6502 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664666_4549638.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:17:19 Heat of formation + Delta-G solvation = -228.662909 kcal Electronic energy + Delta-G solvation = -38565.924962 eV Core-core repulsion = 32527.074217 eV Total energy + Delta-G solvation = -6038.850745 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 407.116 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -51.27391 -48.82832 -48.72088 -43.03186 -41.83132 -41.47343 -40.49995 -39.37146 -37.59110 -37.13696 -36.76383 -35.31978 -33.57627 -32.52149 -31.08852 -29.43925 -27.61667 -27.41862 -27.09513 -26.46328 -24.14773 -23.55033 -22.71560 -21.84937 -20.83360 -20.42187 -20.16121 -19.55924 -19.48700 -19.46912 -19.14549 -18.71107 -18.43283 -18.31953 -17.72466 -17.57608 -17.37175 -16.98647 -16.61788 -16.36558 -16.22473 -16.07028 -15.63154 -15.56314 -15.49751 -15.35230 -15.18726 -15.02736 -14.90719 -14.83849 -14.63549 -14.58557 -14.49221 -14.24958 -13.95350 -13.86669 -13.68516 -13.20125 -13.07598 -12.85704 -12.69031 -12.51340 -12.38891 -12.21866 -12.20430 -11.85004 -11.81579 -11.73718 -11.38395 -10.99150 -10.95225 -10.63780 -10.25318 -9.91615 -5.24213 -1.15064 -0.39751 0.36745 0.51616 0.97936 1.04846 1.36594 1.39681 1.42973 1.63781 1.89511 2.11045 2.25976 2.48549 2.53102 2.72324 2.87541 2.98402 3.08049 3.09988 3.24692 3.35499 3.37259 3.44231 3.51340 3.52440 3.59141 3.61393 3.71264 4.02990 4.05901 4.12496 4.19099 4.22816 4.26522 4.38246 4.43766 4.53532 4.60297 4.66025 4.67146 4.89400 4.92764 5.17195 5.41709 5.69005 5.99154 6.19775 6.37176 6.93886 7.00097 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.071 4.071 3 Si 0.691 3.309 4 C -0.111 4.111 5 C -0.031 4.031 6 C -0.208 4.208 7 C 0.200 3.800 8 O -0.252 6.252 9 C 0.031 3.969 10 C 0.513 3.487 11 O -0.492 6.492 12 N -0.727 5.727 13 C 0.133 3.867 14 C -0.112 4.112 15 H 0.100 0.900 16 C -0.155 4.155 17 C 0.061 3.939 18 O -0.507 6.507 19 C 0.433 3.567 20 F -0.175 7.175 21 F -0.183 7.183 22 F -0.174 7.174 23 C -0.109 4.109 24 C -0.074 4.074 25 N 0.029 4.971 26 O -0.175 6.175 27 O -0.117 6.117 28 C 0.013 3.987 29 H 0.388 0.612 30 H 0.082 0.918 31 H -0.248 1.248 32 H -0.251 1.251 33 H 0.140 0.860 34 H 0.156 0.844 35 H 0.101 0.899 36 H 0.101 0.899 37 H 0.401 0.599 38 H 0.093 0.907 39 H 0.077 0.923 40 H 0.109 0.891 41 H 0.093 0.907 42 H 0.392 0.608 43 H 0.101 0.899 44 H 0.114 0.886 45 H 0.166 0.834 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.011 11.891 -3.195 12.675 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.181 4.181 3 Si 0.591 3.409 4 C -0.113 4.113 5 C -0.049 4.049 6 C -0.227 4.227 7 C 0.150 3.850 8 O -0.161 6.161 9 C -0.048 4.048 10 C 0.296 3.704 11 O -0.364 6.364 12 N -0.383 5.383 13 C 0.010 3.990 14 C -0.131 4.131 15 H 0.118 0.882 16 C -0.192 4.192 17 C 0.018 3.982 18 O -0.314 6.314 19 C 0.378 3.622 20 F -0.157 7.157 21 F -0.164 7.164 22 F -0.155 7.155 23 C -0.147 4.147 24 C -0.158 4.158 25 N 0.549 4.451 26 O -0.384 6.384 27 O -0.341 6.341 28 C -0.006 4.006 29 H 0.236 0.764 30 H 0.100 0.900 31 H -0.172 1.172 32 H -0.176 1.176 33 H 0.158 0.842 34 H 0.174 0.826 35 H 0.119 0.881 36 H 0.119 0.881 37 H 0.235 0.765 38 H 0.111 0.889 39 H 0.096 0.904 40 H 0.127 0.873 41 H 0.111 0.889 42 H 0.243 0.757 43 H 0.119 0.881 44 H 0.132 0.868 45 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges 3.907 11.502 -2.602 12.423 hybrid contribution -0.285 0.156 1.026 1.076 sum 3.622 11.658 -1.577 12.309 Atomic orbital electron populations 1.86497 1.16677 1.81991 1.50022 1.24647 0.86288 1.10678 0.96517 0.94641 0.80813 0.77605 0.87844 1.19234 1.01906 0.92792 0.97334 1.21143 0.92553 0.99681 0.91481 1.21203 1.07759 0.92183 1.01565 1.18646 0.89972 0.90714 0.85622 1.86503 1.66789 1.35520 1.27319 1.22732 0.97916 0.94402 0.89750 1.19754 0.79160 0.88530 0.82943 1.90883 1.52291 1.15664 1.77580 1.45741 1.57594 1.13594 1.21324 1.21344 1.00369 0.92331 0.84949 1.22392 0.98132 0.98089 0.94492 0.88171 1.23819 1.02812 0.96203 0.96370 1.23641 0.95074 0.93280 0.86245 1.86656 1.25595 1.47786 1.71365 1.21288 0.74138 0.74591 0.92191 1.93183 1.74970 1.51316 1.96205 1.93190 1.41423 1.94834 1.86965 1.93234 1.82746 1.54242 1.85308 1.23123 0.93200 1.03743 0.94591 1.20572 1.12590 0.82628 1.00048 1.43303 0.99015 1.02340 1.00414 1.94550 1.39518 1.66154 1.38177 1.94701 1.51931 1.69048 1.18393 1.20819 0.92108 0.93789 0.93884 0.76395 0.89970 1.17215 1.17562 0.84235 0.82632 0.88090 0.88107 0.76516 0.88884 0.90440 0.87278 0.88859 0.75692 0.88077 0.86825 0.81645 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.96 12.81 -35.23 -0.45 0.51 16 2 C -0.07 0.17 2.79 36.00 0.10 0.28 16 3 Si 0.69 -2.68 29.85 -169.99 -5.07 -7.76 16 4 C -0.11 0.01 5.39 -104.60 -0.56 -0.55 16 5 C -0.03 0.04 8.66 -39.60 -0.34 -0.31 16 6 C -0.21 0.32 9.04 -39.43 -0.36 -0.03 16 7 C 0.20 0.37 6.67 -39.21 -0.26 0.10 16 8 O -0.25 -0.72 7.68 -49.75 -0.38 -1.10 16 9 C 0.03 -0.06 5.22 36.01 0.19 0.13 16 10 C 0.51 0.34 7.91 -10.99 -0.09 0.25 16 11 O -0.49 -3.19 16.50 -14.35 -0.24 -3.43 16 12 N -0.73 2.13 5.56 -60.30 -0.33 1.80 16 13 C 0.13 -0.25 5.26 -4.04 -0.02 -0.27 16 14 C -0.11 0.48 3.94 -89.81 -0.35 0.13 16 15 H 0.10 -0.59 8.14 -51.93 -0.42 -1.02 16 16 C -0.15 0.64 6.91 -25.91 -0.18 0.46 16 17 C 0.06 -0.14 1.36 -89.80 -0.12 -0.26 16 18 O -0.51 0.73 11.45 -35.23 -0.40 0.33 16 19 C 0.43 -0.20 2.85 37.16 0.11 -0.10 16 20 F -0.18 0.05 15.76 2.25 0.04 0.09 16 21 F -0.18 -0.04 16.65 2.25 0.04 0.00 16 22 F -0.17 -0.25 17.18 2.25 0.04 -0.21 16 23 C -0.11 0.34 6.86 -25.92 -0.18 0.17 16 24 C -0.07 -0.28 6.87 -79.81 -0.55 -0.83 16 25 N 0.03 0.20 4.45 34.03 0.15 0.36 16 26 O -0.17 -1.32 18.45 -29.46 -0.54 -1.86 16 27 O -0.12 -1.06 17.24 -36.49 -0.63 -1.69 16 28 C 0.01 0.02 9.18 -39.61 -0.36 -0.34 16 29 H 0.39 -2.60 8.74 45.56 0.40 -2.20 16 30 H 0.08 -0.33 7.96 -51.93 -0.41 -0.75 16 31 H -0.25 0.31 7.05 56.52 0.40 0.71 16 32 H -0.25 0.46 7.11 56.52 0.40 0.86 16 33 H 0.14 -0.39 4.86 -52.49 -0.26 -0.64 16 34 H 0.16 -0.83 6.30 -52.49 -0.33 -1.16 16 35 H 0.10 -0.54 7.66 -51.93 -0.40 -0.94 16 36 H 0.10 -0.53 7.66 -51.93 -0.40 -0.92 16 37 H 0.40 -2.61 8.47 -40.82 -0.35 -2.96 16 38 H 0.09 0.01 6.12 -51.93 -0.32 -0.31 16 39 H 0.08 -0.03 8.14 -51.93 -0.42 -0.46 16 40 H 0.11 -0.52 7.13 -51.93 -0.37 -0.89 16 41 H 0.09 -0.41 8.10 -51.93 -0.42 -0.83 16 42 H 0.39 -1.59 8.42 45.56 0.38 -1.21 16 43 H 0.10 -0.25 8.10 -51.93 -0.42 -0.67 16 44 H 0.11 -0.47 7.89 -51.93 -0.41 -0.88 16 45 H 0.17 0.17 7.61 -52.49 -0.40 -0.23 16 LS Contribution 397.94 15.07 6.00 6.00 Total: 0.00 -14.11 397.94 -8.52 -22.63 By element: Atomic # 1 Polarization: -10.75 SS G_CDS: -3.74 Total: -14.49 kcal Atomic # 6 Polarization: 1.81 SS G_CDS: -2.98 Total: -1.17 kcal Atomic # 7 Polarization: 2.34 SS G_CDS: -0.18 Total: 2.15 kcal Atomic # 8 Polarization: -4.59 SS G_CDS: -2.65 Total: -7.24 kcal Atomic # 9 Polarization: -0.23 SS G_CDS: 0.11 Total: -0.12 kcal Atomic # 14 Polarization: -2.68 SS G_CDS: -5.07 Total: -7.76 kcal Total LS contribution 6.00 Total: 6.00 kcal Total: -14.11 -8.52 -22.63 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664666_4549638.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -206.030 kcal (2) G-P(sol) polarization free energy of solvation -14.113 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -220.143 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.520 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.633 kcal (6) G-S(sol) free energy of system = (1) + (5) -228.663 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds