Wall clock time and date at job start Sun Mar 7 2021 10:17:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86301 * 109.47460 * 2 1 4 4 C 1.50698 * 109.47196 * 120.00441 * 2 1 3 5 5 C 1.38246 * 119.97131 * 245.02030 * 4 2 1 6 6 C 1.38291 * 120.11220 * 179.97438 * 5 4 2 7 7 C 1.38125 * 120.05431 * 359.76953 * 6 5 4 8 8 C 1.38753 * 119.94139 * 0.50753 * 7 6 5 9 9 O 1.35904 * 120.05556 * 179.74748 * 8 7 6 10 10 C 1.42903 * 116.99560 * 359.71845 * 9 8 7 11 11 C 1.50706 * 109.47072 * 180.02562 * 10 9 8 12 12 O 1.21280 * 119.99418 * 0.02562 * 11 10 9 13 13 N 1.34777 * 120.00152 * 180.02562 * 11 10 9 14 14 C 1.46497 * 119.99975 * 180.02562 * 13 11 10 15 15 C 1.52999 * 109.46995 * 179.97438 * 14 13 11 16 16 H 1.09007 * 112.84940 * 316.19167 * 15 14 13 17 17 C 1.53778 * 113.61594 * 87.50097 * 15 14 13 18 18 C 1.53784 * 87.08081 * 89.11644 * 17 15 14 19 19 O 1.42895 * 113.61275 * 270.88665 * 18 17 15 20 20 C 1.52992 * 113.61673 * 139.98135 * 18 17 15 21 21 F 1.39906 * 109.47022 * 322.50499 * 20 18 17 22 22 F 1.39904 * 109.47275 * 82.50069 * 20 18 17 23 23 F 1.39902 * 109.47492 * 202.50375 * 20 18 17 24 24 C 1.53778 * 113.61355 * 185.00263 * 15 14 13 25 25 C 1.38170 * 119.97464 * 64.99438 * 4 2 1 26 26 H 0.96703 * 114.00086 * 300.00213 * 1 2 3 27 27 H 1.09007 * 109.46973 * 240.00138 * 2 1 3 28 28 H 1.48501 * 109.99923 * 300.00405 * 3 2 1 29 29 H 1.48498 * 109.99612 * 61.32064 * 3 2 1 30 30 H 1.07995 * 119.94347 * 359.97415 * 5 4 2 31 31 H 1.08001 * 119.97066 * 180.02562 * 6 5 4 32 32 H 1.07993 * 120.02521 * 180.27099 * 7 6 5 33 33 H 1.09005 * 109.47264 * 60.00602 * 10 9 8 34 34 H 1.08997 * 109.47609 * 300.00477 * 10 9 8 35 35 H 0.97002 * 119.99516 * 359.97438 * 13 11 10 36 36 H 1.09001 * 109.47261 * 60.00052 * 14 13 11 37 37 H 1.08997 * 109.47067 * 299.99991 * 14 13 11 38 38 H 1.08993 * 113.61229 * 334.56967 * 17 15 14 39 39 H 1.09000 * 113.61263 * 203.66617 * 17 15 14 40 40 H 0.96703 * 114.00032 * 277.49449 * 19 18 17 41 41 H 1.08998 * 113.61879 * 156.33575 * 24 15 14 42 42 H 1.08999 * 113.61887 * 25.42682 * 24 15 14 43 43 H 1.07997 * 120.02184 * 0.04755 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 2.6384 -0.0117 2.1911 6 6 3.1003 -0.6607 3.3216 7 6 2.8519 -2.0082 3.4957 8 6 2.1475 -2.7130 2.5301 9 8 1.9064 -4.0401 2.6966 10 6 2.4127 -4.6470 3.8872 11 6 2.0518 -6.1102 3.8977 12 8 1.4233 -6.5863 2.9762 13 7 2.4274 -6.8895 4.9311 14 6 2.0770 -8.3120 4.9411 15 6 2.6190 -8.9618 6.2158 16 1 3.6382 -8.6526 6.4481 17 6 1.6571 -8.8683 7.4119 18 6 1.0518 -10.1968 6.9283 19 8 -0.0160 -10.0324 5.9931 20 6 0.7058 -11.1620 8.0638 21 9 1.6821 -11.0765 9.0623 22 9 -0.5409 -10.8230 8.6004 23 9 0.6600 -12.4691 7.5671 24 6 2.4104 -10.4845 6.2676 25 6 1.6845 -2.0596 1.3976 26 1 -0.3933 0.4417 0.7651 27 1 1.7923 -0.5138 -0.8901 28 1 1.5615 2.4679 -1.2085 29 1 1.5880 2.4584 1.2243 30 1 2.8303 1.0428 2.0586 31 1 3.6520 -0.1125 4.0709 32 1 3.2091 -2.5136 4.3807 33 1 1.9759 -4.1585 4.7582 34 1 3.4970 -4.5404 3.9165 35 1 2.9304 -6.5087 5.6680 36 1 2.5149 -8.8001 4.0704 37 1 0.9928 -8.4193 4.9108 38 1 0.9669 -8.0268 7.3523 39 1 2.1545 -8.9415 8.3790 40 1 -0.8731 -9.8512 6.4027 41 1 3.1137 -10.9996 6.9219 42 1 2.3283 -10.9477 5.2844 43 1 1.1324 -2.6051 0.6466 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17664666_4860298.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:17:33 Heat of formation + Delta-G solvation = -242.122916 kcal Electronic energy + Delta-G solvation = -31812.504034 eV Core-core repulsion = 26604.086054 eV Total energy + Delta-G solvation = -5208.417979 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.122 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -51.24640 -48.78953 -48.73300 -41.63811 -41.20825 -40.32959 -38.98178 -37.35412 -36.64036 -35.24473 -32.49373 -31.82023 -30.52209 -28.98351 -27.12047 -26.99052 -26.43875 -23.67865 -23.47974 -22.57319 -21.61809 -20.57942 -20.05218 -19.53579 -19.40401 -19.33461 -18.44858 -17.80830 -17.49528 -17.34164 -17.14953 -16.94980 -16.58826 -16.27732 -16.15563 -16.00676 -15.60670 -15.52434 -15.41236 -15.17567 -15.10347 -14.93522 -14.89734 -14.79242 -14.62616 -14.48389 -14.14185 -14.05839 -13.95938 -13.50364 -13.41889 -13.01340 -12.97368 -12.61065 -12.46012 -12.12868 -12.09547 -11.99687 -11.59880 -11.58978 -11.21203 -10.98364 -10.66152 -10.18745 -9.93755 -9.28092 -4.90538 0.21301 0.39973 1.27833 1.43921 1.49285 1.53306 1.61580 1.97012 2.44468 2.58115 2.60861 2.67157 2.69366 2.92501 3.34334 3.40044 3.42592 3.51986 3.62818 3.67242 3.78600 3.87643 4.01468 4.08644 4.13964 4.25592 4.36727 4.37732 4.47839 4.53841 4.54385 4.65986 4.73320 4.78368 4.86849 4.89520 4.99010 5.11717 5.25315 5.34121 5.37868 5.45816 5.70422 6.27415 6.28204 6.46535 6.47480 7.13016 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.551 6.551 2 C -0.096 4.096 3 Si 0.787 3.213 4 C -0.081 4.081 5 C -0.159 4.159 6 C -0.070 4.070 7 C -0.201 4.201 8 C 0.114 3.886 9 O -0.325 6.325 10 C 0.039 3.961 11 C 0.510 3.490 12 O -0.577 6.577 13 N -0.704 5.704 14 C 0.132 3.868 15 C -0.098 4.098 16 H 0.129 0.871 17 C -0.143 4.143 18 C 0.056 3.944 19 O -0.523 6.523 20 C 0.429 3.571 21 F -0.175 7.175 22 F -0.189 7.189 23 F -0.189 7.189 24 C -0.114 4.114 25 C -0.150 4.150 26 H 0.386 0.614 27 H 0.118 0.882 28 H -0.306 1.306 29 H -0.274 1.274 30 H 0.148 0.852 31 H 0.163 0.837 32 H 0.162 0.838 33 H 0.126 0.874 34 H 0.128 0.872 35 H 0.423 0.577 36 H 0.058 0.942 37 H 0.071 0.929 38 H 0.097 0.903 39 H 0.123 0.877 40 H 0.400 0.600 41 H 0.127 0.873 42 H 0.089 0.911 43 H 0.111 0.889 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.112 4.162 7.964 12.105 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.360 6.360 2 C -0.203 4.203 3 Si 0.691 3.309 4 C -0.082 4.082 5 C -0.176 4.176 6 C -0.088 4.088 7 C -0.219 4.219 8 C 0.069 3.931 9 O -0.238 6.238 10 C -0.039 4.039 11 C 0.296 3.704 12 O -0.455 6.455 13 N -0.359 5.359 14 C 0.009 3.991 15 C -0.116 4.116 16 H 0.147 0.853 17 C -0.181 4.181 18 C 0.012 3.988 19 O -0.332 6.332 20 C 0.375 3.625 21 F -0.156 7.156 22 F -0.170 7.170 23 F -0.170 7.170 24 C -0.151 4.151 25 C -0.169 4.169 26 H 0.235 0.765 27 H 0.136 0.864 28 H -0.235 1.235 29 H -0.201 1.201 30 H 0.165 0.835 31 H 0.181 0.819 32 H 0.180 0.820 33 H 0.143 0.857 34 H 0.146 0.854 35 H 0.261 0.739 36 H 0.077 0.923 37 H 0.089 0.911 38 H 0.116 0.884 39 H 0.141 0.859 40 H 0.253 0.747 41 H 0.146 0.854 42 H 0.107 0.893 43 H 0.129 0.871 Dipole moment (debyes) X Y Z Total from point charges 7.881 4.037 6.252 10.840 hybrid contribution -1.985 -0.725 1.193 2.427 sum 5.896 3.312 7.445 10.058 Atomic orbital electron populations 1.86587 1.18684 1.80573 1.50114 1.25478 0.83451 1.12944 0.98445 0.93841 0.89977 0.70679 0.76434 1.20112 0.98212 0.92929 0.96935 1.21253 1.00656 1.00842 0.94888 1.21337 0.96782 0.93543 0.97123 1.21643 1.03501 0.96325 1.00431 1.19197 0.96291 0.82305 0.95343 1.86129 1.74677 1.20869 1.42148 1.22738 1.02711 0.89931 0.88520 1.20585 0.78992 0.88705 0.82139 1.90782 1.41116 1.76068 1.37555 1.45595 1.57652 1.09634 1.23054 1.21237 1.01056 0.79570 0.97259 1.22271 1.01548 0.94689 0.93126 0.85336 1.23822 0.99042 0.94894 1.00306 1.23870 0.91265 0.95602 0.88027 1.86640 1.20289 1.93219 1.33029 1.21640 0.74414 0.81656 0.84791 1.93179 1.62642 1.96089 1.63733 1.93174 1.43915 1.92069 1.87873 1.93200 1.96117 1.40288 1.87433 1.23251 0.91048 0.97633 1.03201 1.20310 1.04251 0.94614 0.97770 0.76450 0.86443 1.23456 1.20052 0.83507 0.81940 0.82008 0.85659 0.85415 0.73919 0.92316 0.91070 0.88419 0.85922 0.74750 0.85450 0.89253 0.87124 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -3.06 12.83 -148.98 -1.91 -4.97 16 2 C -0.10 -0.16 2.80 71.24 0.20 0.04 16 3 Si 0.79 -1.62 29.88 68.60 2.05 0.43 16 4 C -0.08 -0.16 5.35 -19.88 -0.11 -0.27 16 5 C -0.16 0.39 8.67 22.28 0.19 0.58 16 6 C -0.07 0.35 10.04 22.26 0.22 0.57 16 7 C -0.20 0.69 9.04 22.37 0.20 0.90 16 8 C 0.11 0.44 6.69 22.50 0.15 0.59 16 9 O -0.32 -2.19 9.67 -73.43 -0.71 -2.90 16 10 C 0.04 -0.14 5.22 71.24 0.37 0.23 16 11 C 0.51 1.21 7.91 87.66 0.69 1.90 16 12 O -0.58 -8.89 16.50 16.01 0.26 -8.63 16 13 N -0.70 4.19 5.56 -463.06 -2.57 1.62 16 14 C 0.13 -0.41 5.26 86.38 0.45 0.05 16 15 C -0.10 0.93 3.94 -10.27 -0.04 0.89 16 16 H 0.13 -1.87 8.14 -2.38 -0.02 -1.89 16 17 C -0.14 1.36 6.90 31.12 0.21 1.58 16 18 C 0.06 -0.25 1.36 -10.27 -0.01 -0.26 16 19 O -0.52 0.98 11.44 -148.98 -1.70 -0.73 16 20 C 0.43 -0.33 2.85 71.98 0.21 -0.13 16 21 F -0.17 0.21 15.75 44.97 0.71 0.91 16 22 F -0.19 -0.14 16.65 44.97 0.75 0.61 16 23 F -0.19 -0.68 17.18 44.97 0.77 0.10 16 24 C -0.11 0.74 6.86 31.12 0.21 0.95 16 25 C -0.15 -0.97 9.62 22.37 0.22 -0.75 16 26 H 0.39 -0.29 8.70 -74.05 -0.64 -0.94 16 27 H 0.12 0.15 7.96 -2.38 -0.02 0.13 16 28 H -0.31 -1.86 7.11 99.48 0.71 -1.15 16 29 H -0.27 -0.07 7.01 99.48 0.70 0.63 16 30 H 0.15 -0.96 4.83 -2.91 -0.01 -0.98 16 31 H 0.16 -1.83 8.06 -2.91 -0.02 -1.85 16 32 H 0.16 -1.75 6.30 -2.91 -0.02 -1.77 16 33 H 0.13 -1.31 7.65 -2.38 -0.02 -1.33 16 34 H 0.13 -1.37 7.67 -2.39 -0.02 -1.39 16 35 H 0.42 -6.15 8.47 -92.71 -0.79 -6.94 16 36 H 0.06 0.05 8.14 -2.39 -0.02 0.03 16 37 H 0.07 0.13 6.12 -2.39 -0.01 0.11 16 38 H 0.10 -0.97 8.10 -2.39 -0.02 -0.99 16 39 H 0.12 -1.43 7.13 -2.39 -0.02 -1.44 16 40 H 0.40 -2.81 8.43 -74.06 -0.62 -3.43 16 41 H 0.13 -1.19 7.88 -2.39 -0.02 -1.20 16 42 H 0.09 -0.36 8.10 -2.39 -0.02 -0.38 16 43 H 0.11 1.12 8.06 -2.91 -0.02 1.09 16 Total: 0.00 -30.28 371.84 -0.09 -30.37 By element: Atomic # 1 Polarization: -22.76 SS G_CDS: -0.91 Total: -23.68 kcal Atomic # 6 Polarization: 3.70 SS G_CDS: 3.18 Total: 6.87 kcal Atomic # 7 Polarization: 4.19 SS G_CDS: -2.57 Total: 1.62 kcal Atomic # 8 Polarization: -13.16 SS G_CDS: -4.06 Total: -17.23 kcal Atomic # 9 Polarization: -0.61 SS G_CDS: 2.23 Total: 1.62 kcal Atomic # 14 Polarization: -1.62 SS G_CDS: 2.05 Total: 0.43 kcal Total: -30.28 -0.09 -30.37 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664666_4860298.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -211.751 kcal (2) G-P(sol) polarization free energy of solvation -30.280 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -242.031 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.092 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.372 kcal (6) G-S(sol) free energy of system = (1) + (5) -242.123 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds