Wall clock time and date at job start Sun Mar 7 2021 10:18:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35964 * 117.00163 * 2 1 4 4 C 1.39449 * 120.12081 * 180.02562 * 3 2 1 5 5 O 1.34778 * 133.24516 * 0.06274 * 4 3 2 6 6 C 1.34926 * 110.84622 * 179.97438 * 5 4 3 7 7 C 1.46982 * 125.14196 * 180.02562 * 6 5 4 8 8 O 1.21655 * 120.00312 * 180.02562 * 7 6 5 9 9 N 1.34784 * 120.00066 * 0.02562 * 7 6 5 10 10 C 1.46493 * 119.99864 * 179.72692 * 9 7 6 11 11 C 1.53001 * 109.47084 * 180.02562 * 10 9 7 12 12 H 1.09001 * 112.84620 * 316.18867 * 11 10 9 13 13 C 1.53783 * 113.61829 * 87.49795 * 11 10 9 14 14 C 1.53784 * 87.07854 * 89.11973 * 13 11 10 15 15 O 1.42906 * 113.68938 * 270.87349 * 14 13 11 16 16 C 1.52994 * 113.61331 * 139.98527 * 14 13 11 17 17 F 1.39901 * 109.46930 * 322.49831 * 16 14 13 18 18 F 1.39894 * 109.47499 * 82.50086 * 16 14 13 19 19 F 1.39901 * 109.47191 * 202.50110 * 16 14 13 20 20 C 1.53779 * 87.08491 * 25.43370 * 14 13 11 21 21 C 1.35815 * 109.71608 * 0.26509 * 6 5 4 22 22 C 1.40613 * 119.13732 * 180.02562 * 4 3 2 23 23 C 1.39777 * 120.11795 * 0.02562 * 22 4 3 24 24 C 1.50694 * 120.09360 * 179.97438 * 23 22 4 25 25 O 1.42903 * 109.46862 * 75.00201 * 24 23 22 26 26 Si 1.86302 * 109.47125 * 195.00346 * 24 23 22 27 27 C 1.36628 * 119.81201 * 359.97438 * 23 22 4 28 28 C 1.38257 * 120.11850 * 0.02562 * 3 2 1 29 29 H 1.09002 * 109.47507 * 180.02562 * 1 2 3 30 30 H 1.09004 * 109.46947 * 299.99700 * 1 2 3 31 31 H 1.08999 * 109.47105 * 59.99938 * 1 2 3 32 32 H 0.97000 * 119.99339 * 359.97438 * 9 7 6 33 33 H 1.09007 * 109.47196 * 299.99538 * 10 9 7 34 34 H 1.09006 * 109.47678 * 59.99732 * 10 9 7 35 35 H 1.08996 * 113.61228 * 203.66439 * 13 11 10 36 36 H 1.08997 * 113.60803 * 334.57163 * 13 11 10 37 37 H 0.96699 * 114.00029 * 277.53869 * 15 14 13 38 38 H 1.08998 * 113.61777 * 220.02383 * 20 14 13 39 39 H 1.08994 * 113.69009 * 89.12581 * 20 14 13 40 40 H 1.07997 * 126.95210 * 179.69691 * 21 6 5 41 41 H 1.09003 * 109.47446 * 315.00277 * 24 23 22 42 42 H 0.96705 * 113.99829 * 179.97438 * 25 24 23 43 43 H 1.48497 * 109.99810 * 299.99934 * 26 24 23 44 44 H 1.48491 * 110.00319 * 61.32155 * 26 24 23 45 45 H 1.08006 * 119.75186 * 179.97438 * 27 23 22 46 46 H 1.07998 * 119.66649 * 359.97438 * 28 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2114 0.0000 4 6 3.4387 1.2873 -0.0005 5 8 4.4141 0.3572 -0.0022 6 6 5.6318 0.9385 -0.0026 7 6 6.9131 0.2183 -0.0048 8 8 7.9596 0.8386 -0.0045 9 7 6.9286 -1.1294 -0.0072 10 6 8.2056 -1.8472 -0.0154 11 6 7.9435 -3.3546 -0.0172 12 1 7.1605 -3.6488 0.6817 13 6 7.7698 -3.9481 -1.4252 14 6 9.2931 -4.1592 -1.4385 15 8 10.0233 -3.0407 -1.9463 16 6 9.7225 -5.4851 -2.0695 17 9 8.8076 -6.4848 -1.7222 18 9 9.7587 -5.3491 -3.4614 19 9 10.9941 -5.8339 -1.6019 20 6 9.2215 -4.2023 0.0971 21 6 5.4945 2.2897 0.0048 22 6 4.0555 2.5509 0.0000 23 6 3.2766 3.7116 0.0016 24 6 3.9382 5.0655 0.0028 25 8 4.4600 5.3418 -1.2985 26 14 2.6868 6.3679 0.4595 27 6 1.9138 3.6151 0.0022 28 6 1.2957 2.3725 0.0005 29 1 -0.3634 -1.0277 0.0005 30 1 -0.3633 0.5138 0.8901 31 1 -0.3633 0.5138 -0.8900 32 1 6.0942 -1.6240 -0.0071 33 1 8.7692 -1.5758 -0.9082 34 1 8.7792 -1.5788 0.8719 35 1 7.2002 -4.8772 -1.4402 36 1 7.4227 -3.2255 -2.1638 37 1 10.0719 -3.0081 -2.9115 38 1 10.0461 -3.6850 0.5874 39 1 9.0488 -5.2004 0.4995 40 1 6.2875 3.0228 0.0109 41 1 4.7510 5.0722 0.7291 42 1 4.9007 6.1995 -1.3717 43 1 1.5734 6.3690 -0.5231 44 1 2.1600 6.1099 1.8237 45 1 1.3129 4.5125 0.0038 46 1 0.2174 2.3120 0.0005 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664666_6672420.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:18:10 Heat of formation + Delta-G solvation = -227.366083 kcal Electronic energy + Delta-G solvation = -38122.419320 eV Core-core repulsion = 32339.506772 eV Total energy + Delta-G solvation = -5782.912548 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 402.121 amu Computer time = 1.67 seconds Orbital eigenvalues (eV) -51.22531 -48.77709 -48.67575 -43.67218 -41.51853 -40.80110 -40.12233 -38.98630 -37.09900 -36.76551 -35.31030 -33.58176 -32.05956 -31.26063 -30.06057 -28.73922 -27.37620 -27.28428 -26.23242 -24.62424 -23.99011 -23.43694 -21.88677 -21.60894 -20.85196 -20.16247 -19.65873 -19.49506 -19.35728 -18.81450 -18.47001 -18.44627 -17.66041 -17.43828 -17.15223 -16.93910 -16.72431 -16.36992 -16.30234 -16.19518 -15.69705 -15.56518 -15.47499 -15.42853 -15.13880 -15.03349 -14.87280 -14.81720 -14.64709 -14.59380 -14.46162 -14.27417 -14.10172 -14.00727 -13.97357 -13.63841 -13.42153 -13.16153 -13.13895 -12.65751 -12.63645 -12.44714 -12.32180 -12.10317 -11.90578 -11.78769 -11.48969 -11.23998 -10.94842 -10.34332 -10.24769 -9.77838 -9.00664 -5.03035 -0.59545 0.09261 0.70910 1.19957 1.28184 1.48013 1.58704 1.88793 1.90311 2.02391 2.07131 2.29575 2.36272 2.53574 2.58512 2.78723 3.12207 3.21920 3.31152 3.40069 3.42148 3.52496 3.62368 3.66748 3.81102 3.97793 3.99241 4.06157 4.07038 4.13948 4.15410 4.26739 4.29454 4.33120 4.43073 4.43663 4.52531 4.58096 4.66286 4.72175 4.80847 4.85233 4.96507 5.04810 5.18345 5.22542 5.29787 5.61024 6.03304 6.12896 6.31610 6.60651 6.93353 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.309 6.309 3 C 0.151 3.849 4 C 0.047 3.953 5 O -0.173 6.173 6 C -0.023 4.023 7 C 0.602 3.398 8 O -0.507 6.507 9 N -0.717 5.717 10 C 0.130 3.870 11 C -0.114 4.114 12 H 0.101 0.899 13 C -0.155 4.155 14 C 0.061 3.939 15 O -0.507 6.507 16 C 0.433 3.567 17 F -0.175 7.175 18 F -0.183 7.183 19 F -0.174 7.174 20 C -0.108 4.108 21 C -0.102 4.102 22 C -0.081 4.081 23 C -0.051 4.051 24 C -0.071 4.071 25 O -0.542 6.542 26 Si 0.686 3.314 27 C -0.097 4.097 28 C -0.177 4.177 29 H 0.106 0.894 30 H 0.060 0.940 31 H 0.060 0.940 32 H 0.408 0.592 33 H 0.095 0.905 34 H 0.080 0.920 35 H 0.110 0.890 36 H 0.094 0.906 37 H 0.392 0.608 38 H 0.101 0.899 39 H 0.114 0.886 40 H 0.175 0.825 41 H 0.075 0.925 42 H 0.383 0.617 43 H -0.249 1.249 44 H -0.253 1.253 45 H 0.133 0.867 46 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.229 1.920 1.511 4.884 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.223 6.223 3 C 0.105 3.895 4 C -0.001 4.001 5 O -0.075 6.075 6 C -0.074 4.074 7 C 0.387 3.613 8 O -0.383 6.383 9 N -0.368 5.368 10 C 0.007 3.993 11 C -0.133 4.133 12 H 0.120 0.880 13 C -0.192 4.192 14 C 0.018 3.982 15 O -0.315 6.315 16 C 0.378 3.622 17 F -0.156 7.156 18 F -0.164 7.164 19 F -0.156 7.156 20 C -0.145 4.145 21 C -0.123 4.123 22 C -0.082 4.082 23 C -0.052 4.052 24 C -0.181 4.181 25 O -0.349 6.349 26 Si 0.587 3.413 27 C -0.114 4.114 28 C -0.196 4.196 29 H 0.125 0.875 30 H 0.079 0.921 31 H 0.079 0.921 32 H 0.243 0.757 33 H 0.113 0.887 34 H 0.098 0.902 35 H 0.128 0.872 36 H 0.112 0.888 37 H 0.243 0.757 38 H 0.119 0.881 39 H 0.132 0.868 40 H 0.192 0.808 41 H 0.093 0.907 42 H 0.231 0.769 43 H -0.174 1.174 44 H -0.178 1.178 45 H 0.151 0.849 46 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -4.414 1.517 2.226 5.171 hybrid contribution -0.475 -1.090 -0.846 1.460 sum -4.889 0.426 1.380 5.098 Atomic orbital electron populations 1.23196 0.77314 1.04792 1.01789 1.86167 1.22158 1.25552 1.88388 1.17689 0.86507 0.85798 0.99479 1.18728 0.87419 0.86905 1.07053 1.84045 1.12643 1.34640 1.76146 1.21981 0.83880 0.92600 1.08905 1.16556 0.85368 0.82046 0.77299 1.90933 1.30244 1.67433 1.49727 1.45864 1.10619 1.05752 1.74561 1.21411 0.84771 0.88514 1.04591 1.22400 0.99011 0.94223 0.97630 0.88042 1.23821 0.92995 1.03693 0.98709 1.23651 0.94321 0.82542 0.97719 1.86640 1.74849 1.42086 1.27902 1.21287 0.75558 0.88541 0.76805 1.93188 1.66674 1.63965 1.91808 1.93188 1.96261 1.95876 1.31091 1.93231 1.40856 1.93302 1.88188 1.23116 0.98989 1.02435 0.89986 1.22707 0.94553 0.94358 1.00635 1.19397 0.92799 0.91953 1.04098 1.18440 0.92231 0.92352 1.02171 1.24659 1.05113 0.99220 0.89101 1.86524 1.77932 1.41940 1.28493 0.95126 0.79534 0.86736 0.79922 1.20420 0.93506 0.97450 1.00049 1.20924 1.00383 0.90437 1.07872 0.87526 0.92138 0.92103 0.75684 0.88723 0.90209 0.87209 0.88786 0.75710 0.88089 0.86807 0.80761 0.90691 0.76948 1.17379 1.17762 0.84935 0.83463 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.81 101.05 0.99 0.94 16 2 O -0.31 -0.64 10.50 -19.63 -0.21 -0.85 16 3 C 0.15 0.43 6.70 -39.12 -0.26 0.17 16 4 C 0.05 0.19 7.35 -38.23 -0.28 -0.09 16 5 O -0.17 -0.63 10.28 2.66 0.03 -0.60 16 6 C -0.02 -0.08 7.07 -36.91 -0.26 -0.34 16 7 C 0.60 1.85 7.80 -12.71 -0.10 1.75 16 8 O -0.51 -3.00 16.83 5.23 0.09 -2.91 16 9 N -0.72 -0.05 5.55 -61.52 -0.34 -0.39 16 10 C 0.13 -0.09 5.26 -4.04 -0.02 -0.11 16 11 C -0.11 0.33 3.94 -89.80 -0.35 -0.03 16 12 H 0.10 -0.41 8.14 -51.93 -0.42 -0.83 16 13 C -0.15 0.43 6.91 -25.92 -0.18 0.26 16 14 C 0.06 -0.10 1.36 -89.81 -0.12 -0.22 16 15 O -0.51 0.57 11.45 -35.23 -0.40 0.17 16 16 C 0.43 0.03 2.85 37.15 0.11 0.14 16 17 F -0.17 -0.07 15.76 2.25 0.04 -0.03 16 18 F -0.18 -0.13 16.65 2.25 0.04 -0.09 16 19 F -0.17 -0.30 17.18 2.25 0.04 -0.27 16 20 C -0.11 0.27 6.86 -25.92 -0.18 0.09 16 21 C -0.10 -0.34 10.68 -37.23 -0.40 -0.73 16 22 C -0.08 -0.31 6.16 -105.21 -0.65 -0.96 16 23 C -0.05 -0.14 5.30 -104.63 -0.55 -0.70 16 24 C -0.07 -0.01 2.70 36.00 0.10 0.08 16 25 O -0.54 -0.25 12.86 -35.23 -0.45 -0.70 16 26 Si 0.69 -0.98 30.20 -169.99 -5.13 -6.12 16 27 C -0.10 -0.19 8.62 -39.96 -0.34 -0.54 16 28 C -0.18 -0.22 9.03 -39.38 -0.36 -0.58 16 29 H 0.11 -0.38 8.14 -51.93 -0.42 -0.81 16 30 H 0.06 -0.19 7.66 -51.93 -0.40 -0.59 16 31 H 0.06 -0.18 7.66 -51.93 -0.40 -0.58 16 32 H 0.41 -0.65 8.19 -40.82 -0.33 -0.98 16 33 H 0.09 0.06 6.12 -51.93 -0.32 -0.26 16 34 H 0.08 0.00 8.14 -51.93 -0.42 -0.43 16 35 H 0.11 -0.37 7.13 -51.93 -0.37 -0.74 16 36 H 0.09 -0.26 8.10 -51.93 -0.42 -0.68 16 37 H 0.39 -1.48 8.42 45.56 0.38 -1.09 16 38 H 0.10 -0.22 8.10 -51.93 -0.42 -0.64 16 39 H 0.11 -0.39 7.89 -51.93 -0.41 -0.80 16 40 H 0.17 0.35 8.06 -52.49 -0.42 -0.07 16 41 H 0.08 -0.09 7.96 -51.93 -0.41 -0.50 16 42 H 0.38 -1.78 8.74 45.56 0.40 -1.38 16 43 H -0.25 -0.26 6.75 56.52 0.38 0.12 16 44 H -0.25 -0.26 7.11 56.52 0.40 0.15 16 45 H 0.13 0.11 4.85 -52.48 -0.25 -0.15 16 46 H 0.15 -0.24 6.26 -52.49 -0.33 -0.57 16 LS Contribution 399.06 15.07 6.01 6.01 Total: 0.00 -10.13 399.06 -7.35 -17.48 By element: Atomic # 1 Polarization: -6.64 SS G_CDS: -4.19 Total: -10.83 kcal Atomic # 6 Polarization: 2.00 SS G_CDS: -2.86 Total: -0.86 kcal Atomic # 7 Polarization: -0.05 SS G_CDS: -0.34 Total: -0.39 kcal Atomic # 8 Polarization: -3.95 SS G_CDS: -0.95 Total: -4.90 kcal Atomic # 9 Polarization: -0.50 SS G_CDS: 0.11 Total: -0.39 kcal Atomic # 14 Polarization: -0.98 SS G_CDS: -5.13 Total: -6.12 kcal Total LS contribution 6.01 Total: 6.01 kcal Total: -10.13 -7.35 -17.48 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664666_6672420.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -209.888 kcal (2) G-P(sol) polarization free energy of solvation -10.127 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -220.015 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.351 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.478 kcal (6) G-S(sol) free energy of system = (1) + (5) -227.366 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.67 seconds