Wall clock time and date at job start Sun Mar 7 2021 10:22:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86303 * 109.47078 * 2 1 4 4 C 1.50704 * 109.46850 * 240.00214 * 2 1 3 5 5 C 1.38246 * 119.97128 * 120.00141 * 4 2 1 6 6 C 1.38283 * 120.11014 * 180.02562 * 5 4 2 7 7 C 1.38121 * 120.05809 * 0.02562 * 6 5 4 8 8 C 1.38751 * 119.94246 * 359.97438 * 7 6 5 9 9 O 1.35905 * 120.05870 * 180.02562 * 8 7 6 10 10 C 1.42901 * 116.99604 * 0.02562 * 9 8 7 11 11 C 1.52998 * 109.47046 * 179.97438 * 10 9 8 12 12 C 1.50703 * 109.47225 * 179.97438 * 11 10 9 13 13 O 1.21283 * 120.00114 * 0.02562 * 12 11 10 14 14 N 1.34773 * 120.00193 * 179.97438 * 12 11 10 15 15 C 1.46498 * 120.00182 * 180.02562 * 14 12 11 16 16 C 1.52998 * 109.47214 * 180.02562 * 15 14 12 17 17 F 1.39904 * 109.46933 * 60.00230 * 16 15 14 18 18 C 1.52998 * 109.47242 * 180.02562 * 16 15 14 19 19 C 1.52998 * 109.47238 * 180.02562 * 18 16 15 20 20 C 1.53000 * 109.47194 * 299.99659 * 19 18 16 21 21 H 1.08999 * 109.47094 * 300.00379 * 20 19 18 22 22 C 1.52998 * 109.47516 * 180.02562 * 20 19 18 23 23 O 1.42898 * 109.47286 * 175.00484 * 22 20 19 24 24 C 1.53007 * 109.46840 * 60.00200 * 20 19 18 25 25 C 1.52998 * 109.47064 * 299.99880 * 24 20 19 26 26 C 1.38162 * 119.97090 * 300.25251 * 4 2 1 27 27 H 0.96707 * 113.99961 * 59.99280 * 1 2 3 28 28 H 1.08997 * 109.47091 * 120.00335 * 2 1 3 29 29 H 1.48499 * 109.99897 * 60.00521 * 3 2 1 30 30 H 1.48507 * 109.99860 * 181.31808 * 3 2 1 31 31 H 1.08001 * 119.94242 * 359.97438 * 5 4 2 32 32 H 1.08007 * 119.97266 * 179.97438 * 6 5 4 33 33 H 1.08002 * 120.02792 * 179.97438 * 7 6 5 34 34 H 1.08996 * 109.47352 * 299.99771 * 10 9 8 35 35 H 1.08999 * 109.47144 * 59.99795 * 10 9 8 36 36 H 1.08998 * 109.47592 * 300.00144 * 11 10 9 37 37 H 1.09007 * 109.46935 * 60.00317 * 11 10 9 38 38 H 0.97005 * 119.99923 * 0.02562 * 14 12 11 39 39 H 1.08996 * 109.47314 * 300.00144 * 15 14 12 40 40 H 1.08999 * 109.47014 * 60.00065 * 15 14 12 41 41 H 1.09004 * 109.47100 * 299.99832 * 18 16 15 42 42 H 1.08999 * 109.47046 * 60.00020 * 18 16 15 43 43 H 1.08999 * 109.47410 * 59.99845 * 19 18 16 44 44 H 1.09008 * 109.47411 * 180.02562 * 19 18 16 45 45 H 1.09000 * 109.46903 * 295.00082 * 22 20 19 46 46 H 1.08998 * 109.47363 * 55.00193 * 22 20 19 47 47 H 0.96704 * 114.00103 * 180.02562 * 23 22 20 48 48 H 1.08999 * 109.47130 * 60.00202 * 24 20 19 49 49 H 1.09004 * 109.47191 * 180.02562 * 24 20 19 50 50 H 1.08999 * 109.47410 * 300.00151 * 25 24 20 51 51 H 1.08999 * 109.47656 * 179.97438 * 25 24 20 52 52 H 1.07998 * 120.02953 * 0.02562 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7260 -0.0380 -2.1401 6 6 3.1881 -0.6868 -3.2705 7 6 2.8559 -2.0088 -3.4937 8 6 2.0584 -2.6859 -2.5823 9 8 1.7306 -3.9869 -2.7993 10 6 2.2425 -4.5954 -3.9866 11 6 1.7720 -6.0495 -4.0579 12 6 2.3112 -6.6912 -5.3104 13 8 3.0041 -6.0488 -6.0708 14 7 2.0244 -7.9791 -5.5849 15 6 2.5491 -8.6030 -6.8022 16 6 2.0785 -10.0570 -6.8735 17 9 0.6801 -10.0940 -6.8961 18 6 2.6270 -10.7088 -8.1444 19 6 2.1559 -12.1627 -8.2162 20 6 2.6655 -12.9250 -6.9914 21 1 3.7550 -12.8965 -6.9732 22 6 2.1950 -14.3790 -7.0634 23 8 2.7662 -15.1186 -5.9823 24 6 2.1170 -12.2732 -5.7204 25 6 2.5881 -10.8193 -5.6487 26 6 1.5928 -2.0316 -1.4513 27 1 -0.3933 0.4418 -0.7651 28 1 1.7923 -0.5139 0.8899 29 1 1.5616 2.4678 1.2086 30 1 3.5347 1.7703 -0.0321 31 1 2.9858 0.9961 -1.9680 32 1 3.8085 -0.1592 -3.9799 33 1 3.2167 -2.5150 -4.3769 34 1 1.8790 -4.0524 -4.8590 35 1 3.3319 -4.5669 -3.9689 36 1 2.1357 -6.5924 -3.1856 37 1 0.6824 -6.0784 -4.0756 38 1 1.4706 -8.4930 -4.9766 39 1 2.1850 -8.0604 -7.6745 40 1 3.6386 -8.5738 -6.7848 41 1 2.2635 -10.1661 -9.0171 42 1 3.7165 -10.6800 -8.1264 43 1 1.0664 -12.1911 -8.2344 44 1 2.5470 -12.6272 -9.1214 45 1 1.1078 -14.4130 -6.9923 46 1 2.5111 -14.8168 -8.0102 47 1 2.5107 -16.0512 -5.9654 48 1 1.0275 -12.3017 -5.7386 49 1 2.4804 -12.8160 -4.8478 50 1 3.6776 -10.7909 -5.6305 51 1 2.1970 -10.3548 -4.7435 52 1 0.9682 -2.5552 -0.7426 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17664722_4549614.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:22:18 Heat of formation + Delta-G solvation = -194.425724 kcal Electronic energy + Delta-G solvation = -32608.869093 eV Core-core repulsion = 27874.814513 eV Total energy + Delta-G solvation = -4734.054579 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.188 amu Computer time = 1.58 seconds Orbital eigenvalues (eV) -48.83224 -41.42521 -40.83442 -39.59293 -39.13039 -37.42065 -37.26125 -35.94246 -33.56147 -32.50974 -32.43413 -31.96259 -30.86055 -28.47615 -27.00408 -25.64481 -24.54176 -23.89063 -23.67532 -22.10254 -21.81641 -21.42705 -20.73027 -19.40621 -18.34810 -18.25827 -17.74165 -17.59467 -17.50500 -17.21055 -17.10768 -16.81306 -16.40047 -16.23764 -16.05005 -16.00510 -15.60211 -15.49437 -15.29092 -14.90371 -14.73792 -14.56388 -14.38685 -14.29718 -14.24169 -14.17234 -13.78428 -13.58774 -13.24352 -13.20084 -13.01785 -12.92448 -12.84900 -12.71519 -12.39456 -12.22994 -12.09342 -11.99861 -11.83989 -11.63568 -11.58177 -11.31964 -11.15027 -11.06448 -10.82465 -10.50950 -10.29434 -9.93519 -9.28766 -4.98080 0.18617 0.37736 1.29960 1.44375 1.62976 1.66061 1.96775 2.41123 2.65648 3.15247 3.27955 3.39405 3.49310 3.52046 3.53547 3.58400 3.65375 3.82559 3.85650 3.89832 3.94784 4.02118 4.08288 4.20490 4.22283 4.26315 4.27330 4.36618 4.37694 4.41748 4.49372 4.53163 4.56881 4.60257 4.61812 4.64252 4.65103 4.73100 4.81744 4.92476 4.96727 4.97952 4.99417 5.09472 5.19259 5.23703 5.24834 5.31523 5.36706 5.42673 5.44386 5.69051 6.27927 6.33712 6.75463 6.86183 7.02679 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.555 6.555 2 C -0.079 4.079 3 Si 0.786 3.214 4 C -0.084 4.084 5 C -0.157 4.157 6 C -0.075 4.075 7 C -0.211 4.211 8 C 0.116 3.884 9 O -0.325 6.325 10 C 0.075 3.925 11 C -0.134 4.134 12 C 0.523 3.477 13 O -0.579 6.579 14 N -0.716 5.716 15 C 0.101 3.899 16 C 0.117 3.883 17 F -0.213 7.213 18 C -0.136 4.136 19 C -0.111 4.111 20 C -0.090 4.090 21 H 0.076 0.924 22 C 0.076 3.924 23 O -0.594 6.594 24 C -0.108 4.108 25 C -0.137 4.137 26 C -0.142 4.142 27 H 0.396 0.604 28 H 0.107 0.893 29 H -0.298 1.298 30 H -0.284 1.284 31 H 0.149 0.851 32 H 0.154 0.846 33 H 0.137 0.863 34 H 0.067 0.933 35 H 0.066 0.934 36 H 0.127 0.873 37 H 0.124 0.876 38 H 0.416 0.584 39 H 0.071 0.929 40 H 0.091 0.909 41 H 0.083 0.917 42 H 0.098 0.902 43 H 0.065 0.935 44 H 0.083 0.917 45 H 0.048 0.952 46 H 0.055 0.945 47 H 0.395 0.605 48 H 0.060 0.940 49 H 0.067 0.933 50 H 0.092 0.908 51 H 0.081 0.919 52 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.319 -2.689 -3.416 4.359 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.363 6.363 2 C -0.188 4.188 3 Si 0.692 3.308 4 C -0.085 4.085 5 C -0.175 4.175 6 C -0.092 4.092 7 C -0.230 4.230 8 C 0.071 3.929 9 O -0.239 6.239 10 C -0.001 4.001 11 C -0.174 4.174 12 C 0.310 3.690 13 O -0.459 6.459 14 N -0.369 5.369 15 C -0.023 4.023 16 C 0.099 3.901 17 F -0.194 7.194 18 C -0.174 4.174 19 C -0.148 4.148 20 C -0.109 4.109 21 H 0.094 0.906 22 C -0.001 4.001 23 O -0.403 6.403 24 C -0.146 4.146 25 C -0.175 4.175 26 C -0.160 4.160 27 H 0.246 0.754 28 H 0.124 0.876 29 H -0.226 1.226 30 H -0.211 1.211 31 H 0.166 0.834 32 H 0.171 0.829 33 H 0.155 0.845 34 H 0.085 0.915 35 H 0.085 0.915 36 H 0.145 0.855 37 H 0.142 0.858 38 H 0.253 0.747 39 H 0.090 0.910 40 H 0.110 0.890 41 H 0.102 0.898 42 H 0.117 0.883 43 H 0.083 0.917 44 H 0.101 0.899 45 H 0.067 0.933 46 H 0.073 0.927 47 H 0.245 0.755 48 H 0.079 0.921 49 H 0.085 0.915 50 H 0.110 0.890 51 H 0.100 0.900 52 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges 0.829 -1.548 -2.762 3.273 hybrid contribution -0.458 -1.615 0.132 1.683 sum 0.371 -3.162 -2.630 4.130 Atomic orbital electron populations 1.86468 1.17164 1.82234 1.50471 1.25311 0.85371 1.11319 0.96782 0.93528 0.77811 0.74832 0.84671 1.20247 0.97650 0.93617 0.96959 1.21179 1.00386 1.00715 0.95196 1.21255 0.97522 0.93423 0.97046 1.21554 1.03139 0.97141 1.01142 1.19151 0.95275 0.83475 0.94974 1.85955 1.71423 1.22859 1.43670 1.22429 0.98985 0.93021 0.85617 1.21437 1.04883 0.94194 0.96838 1.20570 0.79511 0.81731 0.87144 1.90741 1.40059 1.63537 1.51552 1.45806 1.53729 1.12000 1.25388 1.21960 1.00630 0.91683 0.88072 1.21226 0.75682 0.94413 0.98829 1.92853 1.31292 1.97469 1.97744 1.22071 1.03040 0.96306 0.96015 1.21454 1.01399 0.94126 0.97828 1.21200 1.01134 0.93109 0.95409 0.90565 1.22272 0.96760 0.91794 0.89296 1.86417 1.75014 1.27404 1.51444 1.21447 1.00632 0.94436 0.98072 1.22147 1.02891 0.95728 0.96691 1.20309 1.03745 0.94714 0.97276 0.75437 0.87603 1.22648 1.21065 0.83429 0.82868 0.84507 0.91495 0.91529 0.85526 0.85750 0.74692 0.91026 0.89033 0.89790 0.88345 0.91662 0.89869 0.93323 0.92660 0.75500 0.92146 0.91461 0.88990 0.89996 0.85570 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.02 12.76 -148.98 -1.90 -2.92 16 2 C -0.08 -0.08 2.82 71.24 0.20 0.12 16 3 Si 0.79 -1.33 29.79 68.60 2.04 0.71 16 4 C -0.08 -0.21 5.39 -19.88 -0.11 -0.32 16 5 C -0.16 -0.01 8.67 22.28 0.19 0.19 16 6 C -0.07 -0.03 10.04 22.25 0.22 0.19 16 7 C -0.21 -0.70 9.04 22.36 0.20 -0.50 16 8 C 0.12 0.68 6.69 22.51 0.15 0.83 16 9 O -0.32 -1.69 10.14 -92.48 -0.94 -2.63 16 10 C 0.07 0.14 4.03 71.98 0.29 0.43 16 11 C -0.13 0.40 6.07 29.85 0.18 0.58 16 12 C 0.52 0.69 7.83 87.66 0.69 1.38 16 13 O -0.58 -5.52 15.98 -3.04 -0.05 -5.57 16 14 N -0.72 1.95 5.19 -463.07 -2.40 -0.45 16 15 C 0.10 -0.22 4.88 86.38 0.42 0.20 16 16 C 0.12 -0.42 0.85 -10.79 -0.01 -0.43 16 17 F -0.21 -0.19 15.63 44.97 0.70 0.51 16 18 C -0.14 0.70 5.00 30.59 0.15 0.85 16 19 C -0.11 0.49 5.08 30.59 0.16 0.65 16 20 C -0.09 0.25 2.43 -10.79 -0.03 0.22 16 21 H 0.08 -0.14 8.14 -2.39 -0.02 -0.16 16 22 C 0.08 -0.20 6.43 71.98 0.46 0.27 16 23 O -0.59 0.03 13.20 -148.98 -1.97 -1.94 16 24 C -0.11 0.22 4.98 30.60 0.15 0.37 16 25 C -0.14 0.64 4.83 30.60 0.15 0.79 16 26 C -0.14 -0.79 9.55 22.37 0.21 -0.58 16 27 H 0.40 -2.50 8.70 -74.05 -0.64 -3.14 16 28 H 0.11 0.26 7.96 -2.39 -0.02 0.24 16 29 H -0.30 -1.67 7.11 99.48 0.71 -0.96 16 30 H -0.28 -0.75 7.11 99.48 0.71 -0.05 16 31 H 0.15 -0.68 4.87 -2.91 -0.01 -0.70 16 32 H 0.15 -0.72 8.06 -2.91 -0.02 -0.74 16 33 H 0.14 0.24 6.30 -2.91 -0.02 0.22 16 34 H 0.07 0.19 7.62 -2.39 -0.02 0.17 16 35 H 0.07 0.19 7.62 -2.39 -0.02 0.17 16 36 H 0.13 -0.83 8.14 -2.39 -0.02 -0.85 16 37 H 0.12 -0.73 8.14 -2.38 -0.02 -0.75 16 38 H 0.42 -2.82 7.26 -92.70 -0.67 -3.50 16 39 H 0.07 0.03 8.14 -2.39 -0.02 0.01 16 40 H 0.09 -0.23 8.14 -2.39 -0.02 -0.25 16 41 H 0.08 -0.44 8.14 -2.39 -0.02 -0.46 16 42 H 0.10 -0.72 8.14 -2.39 -0.02 -0.74 16 43 H 0.06 -0.17 7.80 -2.39 -0.02 -0.19 16 44 H 0.08 -0.51 8.14 -2.38 -0.02 -0.53 16 45 H 0.05 -0.16 8.14 -2.39 -0.02 -0.18 16 46 H 0.06 -0.25 8.14 -2.39 -0.02 -0.27 16 47 H 0.40 -3.11 9.12 -74.05 -0.68 -3.79 16 48 H 0.06 -0.02 7.80 -2.39 -0.02 -0.04 16 49 H 0.07 0.02 7.82 -2.39 -0.02 0.00 16 50 H 0.09 -0.52 8.14 -2.39 -0.02 -0.54 16 51 H 0.08 -0.51 6.86 -2.39 -0.02 -0.52 16 52 H 0.13 0.78 8.06 -2.91 -0.02 0.76 16 Total: 0.00 -22.02 416.90 -1.82 -23.84 By element: Atomic # 1 Polarization: -15.78 SS G_CDS: -1.00 Total: -16.78 kcal Atomic # 6 Polarization: 1.54 SS G_CDS: 3.69 Total: 5.23 kcal Atomic # 7 Polarization: 1.95 SS G_CDS: -2.40 Total: -0.45 kcal Atomic # 8 Polarization: -8.21 SS G_CDS: -4.85 Total: -13.06 kcal Atomic # 9 Polarization: -0.19 SS G_CDS: 0.70 Total: 0.51 kcal Atomic # 14 Polarization: -1.33 SS G_CDS: 2.04 Total: 0.71 kcal Total: -22.02 -1.82 -23.84 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664722_4549614.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -170.585 kcal (2) G-P(sol) polarization free energy of solvation -22.023 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -192.608 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.817 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.840 kcal (6) G-S(sol) free energy of system = (1) + (5) -194.426 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.58 seconds