Wall clock time and date at job start Sun Mar 7 2021 10:23:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35966 * 116.99816 * 2 1 4 4 C 1.39448 * 120.11685 * 180.02562 * 3 2 1 5 5 O 1.34777 * 133.24662 * 0.05443 * 4 3 2 6 6 C 1.34926 * 110.84484 * 179.97438 * 5 4 3 7 7 C 1.46992 * 125.14236 * 180.02562 * 6 5 4 8 8 O 1.21646 * 120.00176 * 180.02562 * 7 6 5 9 9 N 1.34775 * 119.99636 * 0.02804 * 7 6 5 10 10 C 1.46499 * 120.00012 * 179.97438 * 9 7 6 11 11 C 1.52996 * 109.47369 * 180.02562 * 10 9 7 12 12 F 1.39901 * 109.47517 * 59.99739 * 11 10 9 13 13 C 1.52997 * 109.47131 * 180.02562 * 11 10 9 14 14 C 1.53006 * 109.47127 * 179.97438 * 13 11 10 15 15 C 1.52999 * 109.46626 * 299.99539 * 14 13 11 16 16 H 1.08993 * 109.47839 * 299.99931 * 15 14 13 17 17 C 1.53006 * 109.47000 * 180.02562 * 15 14 13 18 18 O 1.42897 * 109.47254 * 175.00316 * 17 15 14 19 19 C 1.52997 * 109.46991 * 60.00378 * 15 14 13 20 20 C 1.52996 * 109.47131 * 299.99311 * 19 15 14 21 21 C 1.35817 * 109.71943 * 0.27200 * 6 5 4 22 22 C 1.40613 * 119.13320 * 180.02562 * 4 3 2 23 23 C 1.39772 * 120.12173 * 0.02562 * 22 4 3 24 24 C 1.50699 * 120.09536 * 179.97438 * 23 22 4 25 25 O 1.42901 * 109.47303 * 75.00353 * 24 23 22 26 26 Si 1.86300 * 109.47413 * 195.00246 * 24 23 22 27 27 C 1.36627 * 119.81302 * 359.97438 * 23 22 4 28 28 C 1.38262 * 120.12340 * 0.02562 * 3 2 1 29 29 H 1.09001 * 109.46735 * 299.99823 * 1 2 3 30 30 H 1.08997 * 109.47018 * 60.00116 * 1 2 3 31 31 H 1.09000 * 109.47175 * 180.02562 * 1 2 3 32 32 H 0.96998 * 120.00166 * 0.02562 * 9 7 6 33 33 H 1.09000 * 109.47392 * 59.99750 * 10 9 7 34 34 H 1.09001 * 109.46813 * 300.00193 * 10 9 7 35 35 H 1.09001 * 109.47502 * 60.00153 * 13 11 10 36 36 H 1.09001 * 109.47289 * 299.99950 * 13 11 10 37 37 H 1.08993 * 109.46955 * 60.00011 * 14 13 11 38 38 H 1.09000 * 109.47050 * 179.97438 * 14 13 11 39 39 H 1.09001 * 109.47164 * 295.00510 * 17 15 14 40 40 H 1.08998 * 109.46741 * 54.99859 * 17 15 14 41 41 H 0.96702 * 113.99667 * 179.97438 * 18 17 15 42 42 H 1.09001 * 109.47289 * 179.97438 * 19 15 14 43 43 H 1.09000 * 109.47611 * 59.99933 * 19 15 14 44 44 H 1.08996 * 109.47452 * 300.00000 * 20 19 15 45 45 H 1.09000 * 109.47054 * 180.02562 * 20 19 15 46 46 H 1.07996 * 126.95904 * 179.69492 * 21 6 5 47 47 H 1.08995 * 109.47348 * 315.00286 * 24 23 22 48 48 H 0.96699 * 113.99846 * 59.99509 * 25 24 23 49 49 H 1.48493 * 110.00231 * 180.02562 * 26 24 23 50 50 H 1.48504 * 109.99845 * 301.32004 * 26 24 23 51 51 H 1.07999 * 119.75647 * 180.02562 * 27 23 22 52 52 H 1.07996 * 119.65686 * 359.97438 * 28 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2115 0.0000 4 6 3.4387 1.2874 -0.0005 5 8 4.4141 0.3573 -0.0020 6 6 5.6318 0.9386 -0.0025 7 6 6.9132 0.2184 -0.0046 8 8 7.9596 0.8388 -0.0044 9 7 6.9287 -1.1292 -0.0068 10 6 8.2057 -1.8471 -0.0095 11 6 7.9435 -3.3544 -0.0123 12 9 7.2128 -3.6986 -1.1546 13 6 9.2773 -4.1040 -0.0145 14 6 9.0151 -5.6115 -0.0167 15 6 8.2181 -5.9922 1.2326 16 1 8.7872 -5.7237 2.1226 17 6 7.9564 -7.4997 1.2309 18 8 7.3147 -7.8732 2.4518 19 6 6.8844 -5.2425 1.2348 20 6 7.1466 -3.7352 1.2370 21 6 5.4945 2.2898 0.0048 22 6 4.0554 2.5510 0.0000 23 6 3.2766 3.7116 0.0016 24 6 3.9382 5.0656 0.0028 25 8 4.4599 5.3420 -1.2985 26 14 2.6867 6.3680 0.4595 27 6 1.9137 3.6151 0.0022 28 6 1.2957 2.3726 0.0005 29 1 -0.3633 0.5138 0.8900 30 1 -0.3633 0.5138 -0.8900 31 1 -0.3633 -1.0277 0.0005 32 1 6.0943 -1.6239 -0.0074 33 1 8.7753 -1.5787 0.8802 34 1 8.7732 -1.5757 -0.8997 35 1 9.8463 -3.8359 0.8757 36 1 9.8454 -3.8324 -0.9042 37 1 8.4460 -5.8799 -0.9066 38 1 9.9653 -6.1455 -0.0187 39 1 7.3130 -7.7558 0.3891 40 1 8.9029 -8.0326 1.1399 41 1 7.1178 -8.8175 2.5197 42 1 6.3163 -5.5141 2.1246 43 1 6.3151 -5.5111 0.3449 44 1 7.7157 -3.4667 2.1269 45 1 6.1963 -3.2012 1.2389 46 1 6.2874 3.0230 0.0109 47 1 4.7509 5.0723 0.7291 48 1 3.7908 5.3519 -1.9965 49 1 3.3266 7.7080 0.4636 50 1 1.5577 6.3478 -0.5050 51 1 1.3128 4.5125 0.0030 52 1 0.2175 2.3120 0.0005 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17664722_6672420.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:23:40 Heat of formation + Delta-G solvation = -175.289750 kcal Electronic energy + Delta-G solvation = -37541.327331 eV Core-core repulsion = 32388.505696 eV Total energy + Delta-G solvation = -5152.821635 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 394.172 amu Computer time = 1.41 seconds Orbital eigenvalues (eV) -48.87422 -43.80318 -41.08384 -40.47788 -39.58235 -39.14831 -37.44743 -37.13347 -36.10696 -33.70188 -32.87609 -31.99596 -31.92160 -31.06147 -28.91433 -28.18906 -26.34524 -25.55231 -24.46243 -24.04449 -23.79164 -22.01871 -21.87209 -21.77391 -20.77517 -19.97216 -19.10095 -18.66690 -18.27445 -17.96830 -17.85860 -17.38975 -17.34442 -17.09670 -16.66178 -16.46568 -16.31753 -16.21993 -16.00571 -15.86002 -15.76020 -15.55270 -15.13849 -14.71321 -14.60341 -14.60046 -14.54257 -14.29711 -14.22618 -13.95852 -13.69141 -13.51988 -13.44256 -13.28198 -13.22250 -13.02349 -12.74864 -12.49361 -12.28720 -12.28464 -12.14073 -12.11894 -11.77516 -11.67075 -11.58403 -11.22963 -11.13965 -11.06639 -10.83110 -10.62067 -10.51016 -9.87610 -9.04293 -4.89140 -0.72235 0.06560 0.56414 1.12369 1.29742 1.59363 1.76784 1.81393 1.97834 2.11077 2.36250 3.08268 3.12011 3.25059 3.34983 3.38618 3.49957 3.52844 3.56070 3.63091 3.77415 3.83903 3.89932 3.93576 3.99936 4.13755 4.19628 4.25611 4.30523 4.34865 4.40352 4.40615 4.41422 4.46340 4.50025 4.53224 4.60358 4.63725 4.74680 4.80013 4.80116 4.83966 4.89139 4.93663 4.97030 5.00692 5.01737 5.09059 5.18606 5.20603 5.29930 5.31290 5.43636 5.53580 6.04590 6.23853 6.49127 6.67093 6.86961 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.014 3.986 2 O -0.334 6.334 3 C 0.136 3.864 4 C 0.021 3.979 5 O -0.183 6.183 6 C -0.036 4.036 7 C 0.604 3.396 8 O -0.540 6.540 9 N -0.705 5.705 10 C 0.097 3.903 11 C 0.116 3.884 12 F -0.214 7.214 13 C -0.134 4.134 14 C -0.111 4.111 15 C -0.089 4.089 16 H 0.079 0.921 17 C 0.077 3.923 18 O -0.594 6.594 19 C -0.108 4.108 20 C -0.139 4.139 21 C -0.108 4.108 22 C -0.096 4.096 23 C -0.099 4.099 24 C -0.090 4.090 25 O -0.548 6.548 26 Si 0.783 3.217 27 C -0.088 4.088 28 C -0.164 4.164 29 H 0.078 0.922 30 H 0.073 0.927 31 H 0.114 0.886 32 H 0.414 0.586 33 H 0.104 0.896 34 H 0.082 0.918 35 H 0.103 0.897 36 H 0.087 0.913 37 H 0.063 0.937 38 H 0.086 0.914 39 H 0.047 0.953 40 H 0.057 0.943 41 H 0.395 0.605 42 H 0.067 0.933 43 H 0.058 0.942 44 H 0.096 0.904 45 H 0.071 0.929 46 H 0.174 0.826 47 H 0.116 0.884 48 H 0.386 0.614 49 H -0.305 1.305 50 H -0.262 1.262 51 H 0.167 0.833 52 H 0.180 0.820 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.757 -2.848 2.525 6.901 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 O -0.248 6.248 3 C 0.090 3.910 4 C -0.027 4.027 5 O -0.085 6.085 6 C -0.086 4.086 7 C 0.390 3.610 8 O -0.420 6.420 9 N -0.356 5.356 10 C -0.026 4.026 11 C 0.097 3.903 12 F -0.195 7.195 13 C -0.172 4.172 14 C -0.148 4.148 15 C -0.107 4.107 16 H 0.097 0.903 17 C -0.001 4.001 18 O -0.403 6.403 19 C -0.145 4.145 20 C -0.177 4.177 21 C -0.129 4.129 22 C -0.097 4.097 23 C -0.100 4.100 24 C -0.198 4.198 25 O -0.356 6.356 26 Si 0.686 3.314 27 C -0.106 4.106 28 C -0.183 4.183 29 H 0.096 0.904 30 H 0.092 0.908 31 H 0.133 0.867 32 H 0.252 0.748 33 H 0.122 0.878 34 H 0.100 0.900 35 H 0.121 0.879 36 H 0.105 0.895 37 H 0.082 0.918 38 H 0.105 0.895 39 H 0.066 0.934 40 H 0.076 0.924 41 H 0.245 0.755 42 H 0.086 0.914 43 H 0.076 0.924 44 H 0.115 0.885 45 H 0.090 0.910 46 H 0.192 0.808 47 H 0.134 0.866 48 H 0.236 0.764 49 H -0.233 1.233 50 H -0.188 1.188 51 H 0.184 0.816 52 H 0.198 0.802 Dipole moment (debyes) X Y Z Total from point charges -4.787 -1.600 2.682 5.716 hybrid contribution -0.272 -1.049 -1.585 1.920 sum -5.059 -2.650 1.097 5.816 Atomic orbital electron populations 1.23490 0.75286 1.06001 1.03212 1.86152 1.24358 1.25882 1.88440 1.18004 0.86095 0.86881 0.99977 1.19245 0.88262 0.87138 1.08097 1.84018 1.12788 1.35188 1.76555 1.21886 0.83946 0.92776 1.10028 1.16611 0.85208 0.82368 0.76788 1.90895 1.31247 1.68104 1.51717 1.45787 1.11182 1.05251 1.73363 1.22195 0.85371 0.89952 1.05093 1.21273 0.93155 0.92743 0.83123 1.92854 1.79703 1.93486 1.53427 1.22072 0.94329 0.95288 1.05505 1.21459 1.01000 0.95128 0.97224 1.21194 0.96606 0.93703 0.99232 0.90294 1.22269 0.96518 0.95246 0.86052 1.86421 1.82028 1.31842 1.39976 1.21437 0.97367 0.93461 1.02258 1.22157 1.00944 0.97495 0.97061 1.22868 0.95458 0.94257 1.00285 1.19575 0.92292 0.92765 1.05057 1.19559 0.93465 0.93863 1.03077 1.25402 1.07806 0.98577 0.87966 1.86608 1.38964 1.92749 1.17287 0.93880 0.75376 0.73426 0.88706 1.20894 0.92922 0.98822 0.97936 1.21380 1.01821 0.89544 1.05511 0.90354 0.90800 0.86725 0.74838 0.87811 0.89961 0.87900 0.89459 0.91784 0.89506 0.93439 0.92439 0.75497 0.91440 0.92372 0.88531 0.90995 0.80837 0.86636 0.76443 1.23282 1.18809 0.81643 0.80235 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.09 9.81 113.37 1.11 1.03 16 2 O -0.33 -1.16 10.50 -93.17 -0.98 -2.13 16 3 C 0.14 0.52 6.70 22.57 0.15 0.67 16 4 C 0.02 0.17 7.35 23.14 0.17 0.34 16 5 O -0.18 -1.80 10.28 -13.41 -0.14 -1.94 16 6 C -0.04 -0.34 7.07 24.00 0.17 -0.17 16 7 C 0.60 5.68 7.80 86.54 0.67 6.35 16 8 O -0.54 -7.89 16.83 -4.18 -0.07 -7.96 16 9 N -0.70 -2.95 5.18 -466.80 -2.42 -5.37 16 10 C 0.10 0.09 4.87 86.38 0.42 0.51 16 11 C 0.12 -0.09 0.85 -10.79 -0.01 -0.10 16 12 F -0.21 -0.93 15.63 44.97 0.70 -0.23 16 13 C -0.13 0.52 5.00 30.60 0.15 0.68 16 14 C -0.11 0.37 5.08 30.60 0.16 0.53 16 15 C -0.09 0.13 2.43 -10.79 -0.03 0.11 16 16 H 0.08 -0.07 8.14 -2.39 -0.02 -0.09 16 17 C 0.08 -0.12 6.43 71.98 0.46 0.34 16 18 O -0.59 -0.52 13.20 -148.98 -1.97 -2.49 16 19 C -0.11 -0.04 4.98 30.59 0.15 0.11 16 20 C -0.14 0.18 4.82 30.59 0.15 0.33 16 21 C -0.11 -0.94 10.68 23.79 0.25 -0.69 16 22 C -0.10 -0.65 6.16 -20.24 -0.12 -0.78 16 23 C -0.10 -0.15 5.26 -19.87 -0.10 -0.26 16 24 C -0.09 -0.03 2.70 71.24 0.19 0.16 16 25 O -0.55 -2.12 12.88 -148.98 -1.92 -4.04 16 26 Si 0.78 -2.94 30.25 68.60 2.08 -0.87 16 27 C -0.09 0.26 8.62 22.02 0.19 0.45 16 28 C -0.16 0.44 9.03 22.40 0.20 0.65 16 29 H 0.08 -0.76 7.66 -2.39 -0.02 -0.78 16 30 H 0.07 -0.67 7.66 -2.39 -0.02 -0.69 16 31 H 0.11 -0.96 8.14 -2.39 -0.02 -0.98 16 32 H 0.41 1.13 6.98 -92.71 -0.65 0.48 16 33 H 0.10 -0.10 8.14 -2.39 -0.02 -0.12 16 34 H 0.08 0.18 8.14 -2.39 -0.02 0.16 16 35 H 0.10 -0.69 8.14 -2.39 -0.02 -0.71 16 36 H 0.09 -0.38 8.14 -2.39 -0.02 -0.40 16 37 H 0.06 -0.08 7.80 -2.39 -0.02 -0.10 16 38 H 0.09 -0.49 8.14 -2.39 -0.02 -0.51 16 39 H 0.05 -0.10 8.14 -2.39 -0.02 -0.12 16 40 H 0.06 -0.22 8.14 -2.39 -0.02 -0.24 16 41 H 0.40 -2.81 9.12 -74.06 -0.68 -3.48 16 42 H 0.07 0.17 7.82 -2.39 -0.02 0.16 16 43 H 0.06 0.14 7.80 -2.39 -0.02 0.12 16 44 H 0.10 -0.31 8.14 -2.39 -0.02 -0.33 16 45 H 0.07 -0.05 6.86 -2.39 -0.02 -0.06 16 46 H 0.17 1.34 8.06 -2.91 -0.02 1.32 16 47 H 0.12 0.04 7.96 -2.39 -0.02 0.02 16 48 H 0.39 -0.97 8.70 -74.06 -0.64 -1.62 16 49 H -0.30 -1.42 7.11 99.48 0.71 -0.72 16 50 H -0.26 0.77 6.69 99.48 0.67 1.44 16 51 H 0.17 -1.38 4.81 -2.91 -0.01 -1.39 16 52 H 0.18 -1.76 6.26 -2.91 -0.02 -1.78 16 Total: 0.00 -23.87 423.10 -1.34 -25.21 By element: Atomic # 1 Polarization: -9.46 SS G_CDS: -0.97 Total: -10.43 kcal Atomic # 6 Polarization: 5.90 SS G_CDS: 4.34 Total: 10.25 kcal Atomic # 7 Polarization: -2.95 SS G_CDS: -2.42 Total: -5.37 kcal Atomic # 8 Polarization: -13.49 SS G_CDS: -5.07 Total: -18.56 kcal Atomic # 9 Polarization: -0.93 SS G_CDS: 0.70 Total: -0.23 kcal Atomic # 14 Polarization: -2.94 SS G_CDS: 2.08 Total: -0.87 kcal Total: -23.87 -1.34 -25.21 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664722_6672420.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -150.083 kcal (2) G-P(sol) polarization free energy of solvation -23.867 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -173.950 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.340 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.207 kcal (6) G-S(sol) free energy of system = (1) + (5) -175.290 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.41 seconds