Wall clock time and date at job start Sun Mar 7 2021 10:24:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86302 * 109.47051 * 2 1 4 4 C 1.50695 * 109.47255 * 119.99988 * 2 1 3 5 5 C 1.34232 * 126.50208 * 255.02953 * 4 2 1 6 6 N 1.36837 * 109.93853 * 179.97438 * 5 4 2 7 7 C 1.46499 * 125.06096 * 179.97438 * 6 5 4 8 8 C 1.50694 * 109.47083 * 265.01790 * 7 6 5 9 9 O 1.21279 * 120.00202 * 0.02562 * 8 7 6 10 10 N 1.34779 * 120.00067 * 179.97438 * 8 7 6 11 11 C 1.46504 * 119.99794 * 180.02562 * 10 8 7 12 12 C 1.53002 * 109.46806 * 180.02562 * 11 10 8 13 13 F 1.39905 * 109.46899 * 304.99441 * 12 11 10 14 14 C 1.53002 * 109.47454 * 64.99922 * 12 11 10 15 15 C 1.53001 * 109.46963 * 180.02562 * 14 12 11 16 16 C 1.53000 * 109.46886 * 299.99499 * 15 14 12 17 17 H 1.09002 * 109.47398 * 300.00496 * 16 15 14 18 18 C 1.52997 * 109.47060 * 180.02562 * 16 15 14 19 19 O 1.42904 * 109.47396 * 64.99895 * 18 16 15 20 20 C 1.53002 * 109.47233 * 60.00670 * 16 15 14 21 21 C 1.52997 * 109.46978 * 185.00001 * 12 11 10 22 22 C 1.37692 * 109.87429 * 0.22226 * 6 5 4 23 23 C 1.39081 * 133.50896 * 180.39588 * 22 6 5 24 24 C 1.37787 * 119.77828 * 179.65396 * 23 22 6 25 25 C 1.38783 * 120.66555 * 359.75205 * 24 23 22 26 26 C 1.36661 * 120.52867 * 0.02562 * 25 24 23 27 27 C 1.39584 * 119.76747 * 359.97438 * 26 25 24 28 28 H 0.96694 * 114.00103 * 299.99514 * 1 2 3 29 29 H 1.09002 * 109.47200 * 240.00426 * 2 1 3 30 30 H 1.48498 * 110.00111 * 178.67944 * 3 2 1 31 31 H 1.48498 * 110.00107 * 300.00221 * 3 2 1 32 32 H 1.08001 * 125.03335 * 359.97438 * 5 4 2 33 33 H 1.09008 * 109.47021 * 145.02138 * 7 6 5 34 34 H 1.09000 * 109.47553 * 25.02087 * 7 6 5 35 35 H 0.96991 * 120.00271 * 0.02562 * 10 8 7 36 36 H 1.08998 * 109.47345 * 60.00275 * 11 10 8 37 37 H 1.09000 * 109.47148 * 299.99463 * 11 10 8 38 38 H 1.09000 * 109.46497 * 300.00109 * 14 12 11 39 39 H 1.09002 * 109.47067 * 59.99861 * 14 12 11 40 40 H 1.09001 * 109.46652 * 179.97438 * 15 14 12 41 41 H 1.08992 * 109.47514 * 59.99933 * 15 14 12 42 42 H 1.09001 * 109.47630 * 185.00216 * 18 16 15 43 43 H 1.09004 * 109.47346 * 305.00346 * 18 16 15 44 44 H 0.96691 * 114.00252 * 179.97438 * 19 18 16 45 45 H 1.09002 * 109.47075 * 59.99068 * 20 16 15 46 46 H 1.08996 * 109.47407 * 180.02562 * 20 16 15 47 47 H 1.09001 * 109.47375 * 59.99908 * 21 12 11 48 48 H 1.09002 * 109.47497 * 299.99550 * 21 12 11 49 49 H 1.08001 * 120.10998 * 359.40566 * 23 22 6 50 50 H 1.08000 * 119.66963 * 179.73440 * 24 23 22 51 51 H 1.08007 * 119.73852 * 180.02562 * 25 24 23 52 52 H 1.08010 * 120.11632 * 179.97438 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.4603 -0.1376 2.3231 6 7 2.8020 -1.0990 3.2349 7 6 3.4067 -0.8404 4.5439 8 6 4.9050 -0.9626 4.4382 9 8 5.4173 -1.2382 3.3740 10 7 5.6757 -0.7647 5.5260 11 6 7.1324 -0.8831 5.4229 12 6 7.7639 -0.6131 6.7901 13 9 7.3375 0.6327 7.2629 14 6 7.3376 -1.7050 7.7735 15 6 7.9687 -1.4345 9.1408 16 6 9.4929 -1.4346 9.0080 17 1 9.8255 -2.4052 8.6398 18 6 10.1240 -1.1648 10.3753 19 8 9.8216 -2.2447 11.2610 20 6 9.9193 -0.3427 8.0246 21 6 9.2880 -0.6135 6.6569 22 6 2.4980 -2.3460 2.7365 23 6 2.6285 -3.6361 3.2394 24 6 2.2155 -4.7107 2.4823 25 6 1.6647 -4.5194 1.2229 26 6 1.5230 -3.2601 0.7112 27 6 1.9347 -2.1571 1.4610 28 1 -0.3933 0.4416 0.7650 29 1 1.7924 -0.5138 -0.8900 30 1 3.5346 1.7704 0.0322 31 1 1.5615 2.4679 -1.2084 32 1 2.5962 0.9248 2.4621 33 1 3.0331 -1.5660 5.2665 34 1 3.1466 0.1660 4.8720 35 1 5.2661 -0.5440 6.3770 36 1 7.5056 -0.1575 4.7002 37 1 7.3929 -1.8895 5.0952 38 1 6.2518 -1.7046 7.8683 39 1 7.6699 -2.6756 7.4051 40 1 7.6646 -2.2122 9.8414 41 1 7.6361 -0.4641 9.5089 42 1 11.2049 -1.0766 10.2657 43 1 9.7234 -0.2370 10.7838 44 1 10.1913 -2.1409 12.1485 45 1 9.5866 0.6278 8.3928 46 1 11.0051 -0.3431 7.9296 47 1 9.5918 0.1644 5.9563 48 1 9.6204 -1.5841 6.2885 49 1 3.0559 -3.7953 4.2183 50 1 2.3216 -5.7121 2.8728 51 1 1.3456 -5.3725 0.6425 52 1 1.0938 -3.1189 -0.2698 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17664722_9818708.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:24:02 Heat of formation + Delta-G solvation = -109.915268 kcal Electronic energy + Delta-G solvation = -34867.349999 eV Core-core repulsion = 30133.764068 eV Total energy + Delta-G solvation = -4733.585931 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 377.184 amu Computer time = 1.40 seconds Orbital eigenvalues (eV) -48.83493 -42.54065 -40.72119 -39.56883 -38.11645 -37.66790 -37.34453 -35.93834 -34.12469 -32.75345 -31.96915 -31.44016 -30.24324 -29.39959 -27.91619 -25.83085 -24.77347 -24.04729 -23.67296 -22.67366 -21.85256 -21.67743 -20.76372 -20.64825 -18.87434 -18.49412 -18.25006 -17.78179 -17.41410 -17.26088 -16.89357 -16.57278 -16.42940 -16.31046 -16.14714 -15.91831 -15.65365 -15.48277 -15.37672 -15.10583 -14.80438 -14.74553 -14.60076 -14.37598 -14.29373 -14.09653 -14.00576 -13.71879 -13.61639 -13.22472 -13.13354 -13.00442 -12.72079 -12.70693 -12.59648 -12.27450 -12.24611 -12.13187 -12.09727 -11.82806 -11.58275 -11.34757 -11.16245 -11.09905 -10.82330 -10.56774 -10.32044 -10.31543 -9.16826 -8.63917 -5.06239 0.13284 0.62117 1.32988 1.39918 1.40481 1.62738 1.74026 1.98719 2.12709 2.93623 3.14321 3.27059 3.37516 3.51726 3.56451 3.57500 3.64126 3.67891 3.74048 3.86625 3.92842 4.01215 4.03656 4.15012 4.19312 4.20657 4.26865 4.28971 4.37788 4.41037 4.47242 4.52090 4.55373 4.55627 4.61873 4.63676 4.70507 4.77492 4.81328 4.87504 4.92618 4.97082 4.99009 5.09263 5.12265 5.16277 5.23461 5.32117 5.44368 5.49511 5.64930 5.72235 5.74320 6.16073 6.21161 6.38303 6.86782 6.88350 7.03530 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.560 6.560 2 C -0.040 4.040 3 Si 0.800 3.200 4 C -0.225 4.225 5 C 0.079 3.921 6 N -0.466 5.466 7 C 0.089 3.911 8 C 0.493 3.507 9 O -0.572 6.572 10 N -0.711 5.711 11 C 0.103 3.897 12 C 0.121 3.879 13 F -0.209 7.209 14 C -0.136 4.136 15 C -0.108 4.108 16 C -0.090 4.090 17 H 0.073 0.927 18 C 0.076 3.924 19 O -0.594 6.594 20 C -0.110 4.110 21 C -0.138 4.138 22 C 0.091 3.909 23 C -0.133 4.133 24 C -0.108 4.108 25 C -0.154 4.154 26 C -0.091 4.091 27 C -0.117 4.117 28 H 0.393 0.607 29 H 0.088 0.912 30 H -0.295 1.295 31 H -0.297 1.297 32 H 0.207 0.793 33 H 0.146 0.854 34 H 0.167 0.833 35 H 0.418 0.582 36 H 0.068 0.932 37 H 0.084 0.916 38 H 0.086 0.914 39 H 0.088 0.912 40 H 0.067 0.933 41 H 0.063 0.937 42 H 0.053 0.947 43 H 0.050 0.950 44 H 0.396 0.604 45 H 0.067 0.933 46 H 0.080 0.920 47 H 0.081 0.919 48 H 0.094 0.906 49 H 0.134 0.866 50 H 0.146 0.854 51 H 0.136 0.864 52 H 0.116 0.884 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.334 3.069 9.942 10.490 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.368 6.368 2 C -0.150 4.150 3 Si 0.706 3.294 4 C -0.232 4.232 5 C -0.047 4.047 6 N -0.149 5.149 7 C -0.036 4.036 8 C 0.278 3.722 9 O -0.450 6.450 10 N -0.365 5.365 11 C -0.022 4.022 12 C 0.102 3.898 13 F -0.190 7.190 14 C -0.173 4.173 15 C -0.145 4.145 16 C -0.109 4.109 17 H 0.092 0.908 18 C -0.001 4.001 19 O -0.403 6.403 20 C -0.147 4.147 21 C -0.176 4.176 22 C -0.015 4.015 23 C -0.154 4.154 24 C -0.127 4.127 25 C -0.173 4.173 26 C -0.109 4.109 27 C -0.122 4.122 28 H 0.243 0.757 29 H 0.106 0.894 30 H -0.223 1.223 31 H -0.225 1.225 32 H 0.224 0.776 33 H 0.164 0.836 34 H 0.185 0.815 35 H 0.256 0.744 36 H 0.086 0.914 37 H 0.102 0.898 38 H 0.104 0.896 39 H 0.106 0.894 40 H 0.086 0.914 41 H 0.082 0.918 42 H 0.072 0.928 43 H 0.069 0.931 44 H 0.245 0.755 45 H 0.086 0.914 46 H 0.099 0.901 47 H 0.100 0.900 48 H 0.113 0.887 49 H 0.152 0.848 50 H 0.164 0.836 51 H 0.154 0.846 52 H 0.134 0.866 Dipole moment (debyes) X Y Z Total from point charges 2.076 3.048 8.026 8.832 hybrid contribution 0.519 -0.442 0.289 0.741 sum 2.595 2.606 8.315 9.092 Atomic orbital electron populations 1.86450 1.17715 1.82385 1.50209 1.24560 0.84723 1.10312 0.95377 0.94129 0.76667 0.73652 0.84997 1.20788 1.11894 0.91929 0.98596 1.22067 0.98842 0.95345 0.88400 1.43446 1.52008 1.03833 1.15593 1.21991 0.88134 1.09373 0.84079 1.21506 0.90795 0.76276 0.83593 1.90812 1.75821 1.48490 1.29847 1.45715 1.06561 1.71496 1.12718 1.21899 0.80425 1.03295 0.96534 1.21158 0.95649 0.80481 0.92472 1.92851 1.91385 1.44805 1.89942 1.22144 1.02210 0.98163 0.94820 1.21445 0.94386 1.02313 0.96395 1.21195 0.95844 0.99818 0.94020 0.90823 1.22271 0.98758 0.89057 0.90039 1.86415 1.79848 1.46666 1.27340 1.21456 1.01275 0.98515 0.93496 1.22090 0.91866 1.04835 0.98838 1.18401 1.01586 0.87078 0.94385 1.20258 1.04584 0.89079 1.01434 1.21129 0.98213 0.99059 0.94301 1.20914 1.02360 0.96963 0.97026 1.20444 0.99296 0.91826 0.99375 1.19364 1.03958 0.93893 0.94941 0.75683 0.89403 1.22297 1.22491 0.77625 0.83644 0.81517 0.74359 0.91403 0.89778 0.89584 0.89363 0.91417 0.91839 0.92835 0.93140 0.75486 0.91412 0.90110 0.90003 0.88728 0.84792 0.83644 0.84643 0.86583 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -2.55 12.88 -148.98 -1.92 -4.47 16 2 C -0.04 -0.19 3.06 71.23 0.22 0.03 16 3 Si 0.80 0.11 30.75 68.60 2.11 2.22 16 4 C -0.22 -1.38 5.57 -18.63 -0.10 -1.49 16 5 C 0.08 0.08 9.89 83.00 0.82 0.90 16 6 N -0.47 -0.79 2.27 -519.99 -1.18 -1.97 16 7 C 0.09 -0.62 6.48 85.63 0.55 -0.07 16 8 C 0.49 -0.21 7.90 87.65 0.69 0.48 16 9 O -0.57 -6.48 16.42 -3.03 -0.05 -6.53 16 10 N -0.71 3.86 5.17 -463.05 -2.40 1.46 16 11 C 0.10 -0.32 4.85 86.38 0.42 0.10 16 12 C 0.12 -0.61 0.84 -10.79 -0.01 -0.62 16 13 F -0.21 0.36 15.42 44.97 0.69 1.05 16 14 C -0.14 0.85 4.87 30.60 0.15 0.99 16 15 C -0.11 0.38 4.98 30.59 0.15 0.54 16 16 C -0.09 0.32 2.43 -10.79 -0.03 0.30 16 17 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 18 C 0.08 -0.26 6.43 71.98 0.46 0.20 16 19 O -0.59 0.51 13.20 -148.98 -1.97 -1.45 16 20 C -0.11 0.56 5.08 30.61 0.16 0.72 16 21 C -0.14 0.76 5.00 30.61 0.15 0.91 16 22 C 0.09 0.69 6.80 39.03 0.27 0.95 16 23 C -0.13 -0.73 10.00 22.37 0.22 -0.50 16 24 C -0.11 -0.57 10.01 22.29 0.22 -0.35 16 25 C -0.15 -1.13 9.97 22.03 0.22 -0.91 16 26 C -0.09 -0.95 10.05 22.23 0.22 -0.73 16 27 C -0.12 -1.24 6.35 -20.20 -0.13 -1.37 16 28 H 0.39 -1.82 8.70 -74.06 -0.64 -2.46 16 29 H 0.09 0.73 7.96 -2.39 -0.02 0.71 16 30 H -0.30 -1.98 7.11 99.48 0.71 -1.27 16 31 H -0.30 -2.11 7.11 99.48 0.71 -1.40 16 32 H 0.21 -1.60 6.35 -2.91 -0.02 -1.61 16 33 H 0.15 -1.78 8.14 -2.38 -0.02 -1.80 16 34 H 0.17 -2.58 8.12 -2.39 -0.02 -2.60 16 35 H 0.42 -4.59 7.46 -92.72 -0.69 -5.28 16 36 H 0.07 0.01 8.14 -2.39 -0.02 -0.01 16 37 H 0.08 -0.17 8.14 -2.39 -0.02 -0.19 16 38 H 0.09 -0.73 7.18 -2.39 -0.02 -0.75 16 39 H 0.09 -0.57 8.14 -2.39 -0.02 -0.59 16 40 H 0.07 -0.08 7.82 -2.39 -0.02 -0.10 16 41 H 0.06 -0.16 7.80 -2.39 -0.02 -0.17 16 42 H 0.05 -0.27 8.14 -2.39 -0.02 -0.29 16 43 H 0.05 -0.22 8.14 -2.39 -0.02 -0.24 16 44 H 0.40 -3.43 9.12 -74.06 -0.68 -4.10 16 45 H 0.07 -0.25 7.80 -2.39 -0.02 -0.27 16 46 H 0.08 -0.51 8.14 -2.39 -0.02 -0.53 16 47 H 0.08 -0.43 8.14 -2.39 -0.02 -0.45 16 48 H 0.09 -0.65 8.14 -2.39 -0.02 -0.67 16 49 H 0.13 0.05 8.06 -2.91 -0.02 0.02 16 50 H 0.15 0.01 8.06 -2.91 -0.02 -0.02 16 51 H 0.14 0.44 8.06 -2.91 -0.02 0.42 16 52 H 0.12 1.14 8.06 -2.91 -0.02 1.12 16 Total: 0.00 -31.26 422.84 -1.06 -32.32 By element: Atomic # 1 Polarization: -21.69 SS G_CDS: -1.01 Total: -22.70 kcal Atomic # 6 Polarization: -4.59 SS G_CDS: 4.67 Total: 0.07 kcal Atomic # 7 Polarization: 3.07 SS G_CDS: -3.58 Total: -0.51 kcal Atomic # 8 Polarization: -8.51 SS G_CDS: -3.93 Total: -12.45 kcal Atomic # 9 Polarization: 0.36 SS G_CDS: 0.69 Total: 1.05 kcal Atomic # 14 Polarization: 0.11 SS G_CDS: 2.11 Total: 2.22 kcal Total: -31.26 -1.06 -32.32 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664722_9818708.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -77.596 kcal (2) G-P(sol) polarization free energy of solvation -31.262 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -108.858 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.057 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.319 kcal (6) G-S(sol) free energy of system = (1) + (5) -109.915 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.41 seconds