Wall clock time and date at job start Sun Mar 7 2021 08:02:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17399 * 1 3 3 C 1.47201 * 179.97438 * 2 1 4 4 H 1.09001 * 109.46952 * 33.54408 * 3 2 1 5 5 C 1.52996 * 109.47098 * 153.54137 * 3 2 1 6 6 C 1.53002 * 109.46972 * 60.00332 * 5 3 2 7 7 C 1.52997 * 109.47415 * 59.99860 * 6 5 3 8 8 H 1.09000 * 109.47140 * 59.99976 * 7 6 5 9 9 N 1.46500 * 109.47204 * 180.02562 * 7 6 5 10 10 C 1.34775 * 120.00366 * 274.99782 * 9 7 6 11 11 O 1.21575 * 119.99472 * 0.02562 * 10 9 7 12 12 C 1.47693 * 120.00234 * 179.97438 * 10 9 7 13 13 C 1.39811 * 120.15374 * 179.72487 * 12 10 9 14 14 F 1.35101 * 120.08316 * 359.97438 * 13 12 10 15 15 C 1.38306 * 119.82840 * 179.74773 * 13 12 10 16 16 C 1.38183 * 120.14869 * 0.52819 * 15 13 12 17 17 C 1.50698 * 119.84709 * 179.76625 * 16 15 13 18 18 O 1.42905 * 109.47068 * 254.98387 * 17 16 15 19 19 Si 1.86298 * 109.46956 * 14.97908 * 17 16 15 20 20 C 1.38662 * 120.31430 * 359.74561 * 16 15 13 21 21 F 1.35099 * 119.91739 * 179.97438 * 20 16 15 22 22 C 1.38069 * 120.16351 * 359.97438 * 20 16 15 23 23 C 1.53006 * 109.47164 * 300.00027 * 7 6 5 24 24 C 1.52997 * 109.47145 * 273.54189 * 3 2 1 25 25 H 4.18742 * 15.04023 * 359.97438 * 4 2 1 26 26 H 1.08992 * 109.47534 * 300.00353 * 5 3 2 27 27 H 1.08996 * 109.47134 * 179.97438 * 5 3 2 28 28 H 1.09000 * 109.46986 * 299.99742 * 6 5 3 29 29 H 1.09001 * 109.47601 * 180.02562 * 6 5 3 30 30 H 0.97001 * 119.99882 * 94.99976 * 9 7 6 31 31 H 1.08003 * 119.92640 * 180.27879 * 15 13 12 32 32 H 1.08994 * 109.47657 * 134.97880 * 17 16 15 33 33 H 0.96700 * 114.00052 * 179.97438 * 18 17 16 34 34 H 1.48497 * 110.00256 * 178.68416 * 19 17 16 35 35 H 1.48504 * 110.00228 * 300.00055 * 19 17 16 36 36 H 1.08003 * 120.06990 * 180.02562 * 22 20 16 37 37 H 1.08993 * 109.46955 * 180.02562 * 23 7 6 38 38 H 1.09000 * 109.47050 * 300.00004 * 23 7 6 39 39 H 1.09000 * 109.47140 * 179.97438 * 24 3 2 40 40 H 1.09002 * 109.47045 * 60.00036 * 24 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 1 3.0097 -0.8557 -0.5679 5 6 3.1554 1.2923 -0.6427 6 6 2.6449 2.4943 0.1544 7 6 3.1549 2.4054 1.5941 8 1 4.2449 2.4059 1.5941 9 7 2.6656 3.5561 2.3575 10 6 3.3414 4.7218 2.3269 11 8 4.3568 4.8185 1.6655 12 6 2.8477 5.8820 3.0961 13 6 3.5494 7.0911 3.0712 14 9 4.6822 7.2018 2.3435 15 6 3.0782 8.1748 3.7898 16 6 1.9230 8.0611 4.5396 17 6 1.4186 9.2447 5.3242 18 8 1.6934 9.0479 6.7127 19 14 2.2748 10.7908 4.7349 20 6 1.2255 6.8632 4.5731 21 9 0.0973 6.7608 5.3093 22 6 1.6810 5.7748 3.8561 23 6 2.6455 1.1138 2.2369 24 6 3.1560 -0.0882 1.4397 25 1 -1.0501 -0.0010 -0.0001 26 1 2.7921 1.3557 -1.6683 27 1 4.2454 1.2930 -0.6423 28 1 1.5549 2.4938 0.1544 29 1 3.0074 3.4146 -0.3036 30 1 1.8552 3.4790 2.8850 31 1 3.6165 9.1108 3.7682 32 1 0.3434 9.3465 5.1774 33 1 1.3957 9.7729 7.2792 34 1 1.7632 11.9698 5.4788 35 1 3.7416 10.6648 4.9296 36 1 1.1363 4.8426 3.8830 37 1 3.0085 1.0507 3.2626 38 1 1.5555 1.1133 2.2369 39 1 4.2460 -0.0882 1.4397 40 1 2.7931 -1.0084 1.8976 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17761044_12360598.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:02:46 Heat of formation + Delta-G solvation = -72.195642 kcal Electronic energy + Delta-G solvation = -26905.304652 eV Core-core repulsion = 22710.158971 eV Total energy + Delta-G solvation = -4195.145682 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.117 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -50.13409 -50.12471 -41.57218 -40.28005 -39.36088 -37.78038 -35.91661 -33.86331 -32.84926 -31.84717 -31.41955 -30.33845 -27.76848 -24.58738 -24.41045 -23.74630 -23.17261 -21.73915 -21.72819 -19.67502 -18.79367 -18.69383 -18.46186 -18.20681 -17.40962 -17.26631 -17.14814 -16.54401 -16.37154 -16.21215 -15.97798 -15.67788 -15.55003 -15.36835 -15.33196 -15.16726 -14.53728 -14.01956 -13.99852 -13.82046 -13.75093 -13.59929 -13.23765 -13.10671 -12.89145 -12.43112 -12.27162 -12.20597 -11.99591 -11.77881 -11.53215 -11.24934 -10.94401 -10.84050 -10.64643 -10.61305 -10.19485 -9.84583 -4.97743 -0.83653 -0.33416 1.14194 1.35622 1.54592 1.82543 1.87725 1.95730 1.98680 2.20658 2.73085 2.81352 3.04333 3.29812 3.38814 3.45006 3.60960 3.69578 3.72616 3.77406 3.99507 4.09403 4.12998 4.20334 4.29179 4.31783 4.43806 4.44715 4.49654 4.55327 4.63796 4.66075 4.71768 4.85961 5.02457 5.04953 5.11971 5.14378 5.16315 5.29600 5.33863 5.35996 5.43744 6.29954 6.48120 6.77176 6.97355 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.221 4.221 2 C -0.193 4.193 3 C 0.016 3.984 4 H 0.104 0.896 5 C -0.107 4.107 6 C -0.125 4.125 7 C 0.148 3.852 8 H 0.078 0.922 9 N -0.705 5.705 10 C 0.559 3.441 11 O -0.558 6.558 12 C -0.148 4.148 13 C 0.140 3.860 14 F -0.123 7.123 15 C -0.131 4.131 16 C -0.054 4.054 17 C -0.091 4.091 18 O -0.553 6.553 19 Si 0.767 3.233 20 C 0.104 3.896 21 F -0.126 7.126 22 C -0.077 4.077 23 C -0.121 4.121 24 C -0.106 4.106 25 H 0.233 0.767 26 H 0.068 0.932 27 H 0.081 0.919 28 H 0.066 0.934 29 H 0.050 0.950 30 H 0.413 0.587 31 H 0.167 0.833 32 H 0.105 0.895 33 H 0.402 0.598 34 H -0.275 1.275 35 H -0.288 1.288 36 H 0.181 0.819 37 H 0.081 0.919 38 H 0.074 0.926 39 H 0.085 0.915 40 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.230 -0.514 0.574 5.286 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C -0.193 4.193 3 C -0.002 4.002 4 H 0.122 0.878 5 C -0.145 4.145 6 C -0.163 4.163 7 C 0.044 3.956 8 H 0.096 0.904 9 N -0.357 5.357 10 C 0.346 3.654 11 O -0.437 6.437 12 C -0.152 4.152 13 C 0.119 3.881 14 F -0.101 7.101 15 C -0.149 4.149 16 C -0.056 4.056 17 C -0.199 4.199 18 O -0.364 6.364 19 Si 0.671 3.329 20 C 0.084 3.916 21 F -0.104 7.104 22 C -0.096 4.096 23 C -0.159 4.159 24 C -0.144 4.144 25 H 0.250 0.750 26 H 0.087 0.913 27 H 0.100 0.900 28 H 0.085 0.915 29 H 0.068 0.932 30 H 0.252 0.748 31 H 0.184 0.816 32 H 0.123 0.877 33 H 0.253 0.747 34 H -0.201 1.201 35 H -0.216 1.216 36 H 0.198 0.802 37 H 0.099 0.901 38 H 0.092 0.908 39 H 0.104 0.896 40 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges -3.764 -0.350 0.105 3.782 hybrid contribution -0.736 0.087 1.357 1.547 sum -4.500 -0.263 1.462 4.739 Atomic orbital electron populations 1.25552 0.96796 1.00839 1.00524 1.23338 0.94859 1.00434 1.00667 1.18485 0.84373 0.99286 0.98075 0.87820 1.21507 1.01505 0.92457 0.98995 1.21857 1.01125 0.98388 0.94957 1.21063 0.99416 0.84479 0.90637 0.90417 1.45880 1.29178 1.10607 1.50001 1.18033 0.83387 0.83227 0.80770 1.90862 1.25773 1.83833 1.43246 1.19841 0.98067 0.93943 1.03375 1.17747 0.83808 0.93749 0.92763 1.91600 1.47542 1.96334 1.74663 1.21047 0.96518 0.99481 0.97864 1.19504 0.94277 0.94733 0.97062 1.24993 1.06471 1.04100 0.84362 1.86538 1.84696 1.49068 1.16065 0.93936 0.76737 0.72478 0.89799 1.17318 0.85484 0.94101 0.94705 1.91559 1.47730 1.96465 1.74639 1.21333 0.94458 0.99769 0.94055 1.21787 1.01795 0.92418 0.99910 1.21518 1.01774 0.98121 0.92972 0.74997 0.91303 0.89997 0.91523 0.93167 0.74844 0.81576 0.87723 0.74683 1.20086 1.21574 0.80156 0.90050 0.90779 0.89604 0.90216 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.22 0.05 19.25 74.32 1.43 1.48 16 2 C -0.19 -0.14 10.06 31.13 0.31 0.18 16 3 C 0.02 -0.04 3.07 -12.60 -0.04 -0.07 16 4 H 0.10 -0.41 8.14 -2.39 -0.02 -0.43 16 5 C -0.11 0.11 5.43 30.59 0.17 0.28 16 6 C -0.12 -0.14 5.27 30.59 0.16 0.02 16 7 C 0.15 -0.02 2.45 44.99 0.11 0.09 16 8 H 0.08 0.28 7.58 -2.39 -0.02 0.27 16 9 N -0.70 0.48 5.03 -445.54 -2.24 -1.76 16 10 C 0.56 3.34 7.73 86.74 0.67 4.01 16 11 O -0.56 -8.14 15.00 -3.95 -0.06 -8.20 16 12 C -0.15 -0.44 5.88 -20.06 -0.12 -0.56 16 13 C 0.14 0.74 7.28 22.67 0.17 0.91 16 14 F -0.12 -1.33 15.55 44.97 0.70 -0.63 16 15 C -0.13 -0.15 8.62 22.27 0.19 0.04 16 16 C -0.05 -0.01 5.30 -19.78 -0.10 -0.11 16 17 C -0.09 0.25 2.43 71.24 0.17 0.43 16 18 O -0.55 0.01 12.86 -148.98 -1.92 -1.91 16 19 Si 0.77 -3.39 30.18 68.60 2.07 -1.31 16 20 C 0.10 0.00 7.23 22.33 0.16 0.16 16 21 F -0.13 -0.17 16.73 44.97 0.75 0.58 16 22 C -0.08 0.18 9.51 22.57 0.21 0.40 16 23 C -0.12 0.49 5.17 30.60 0.16 0.65 16 24 C -0.11 0.46 5.43 30.59 0.17 0.63 16 25 H 0.23 -1.34 7.80 -4.41 -0.03 -1.38 16 26 H 0.07 -0.03 8.14 -2.39 -0.02 -0.05 16 27 H 0.08 -0.15 8.14 -2.39 -0.02 -0.17 16 28 H 0.07 0.08 7.23 -2.39 -0.02 0.07 16 29 H 0.05 0.28 8.14 -2.39 -0.02 0.26 16 30 H 0.41 -2.85 6.63 -92.71 -0.61 -3.46 16 31 H 0.17 -0.23 4.87 -2.91 -0.01 -0.25 16 32 H 0.10 -0.68 7.89 -2.39 -0.02 -0.69 16 33 H 0.40 -3.30 8.74 -74.06 -0.65 -3.95 16 34 H -0.27 0.21 7.11 99.48 0.71 0.92 16 35 H -0.29 -0.62 6.74 99.48 0.67 0.05 16 36 H 0.18 -1.67 6.41 -2.91 -0.02 -1.69 16 37 H 0.08 -0.43 8.14 -2.39 -0.02 -0.45 16 38 H 0.07 -0.30 7.23 -2.39 -0.02 -0.32 16 39 H 0.09 -0.48 8.14 -2.39 -0.02 -0.50 16 40 H 0.08 -0.39 8.14 -2.39 -0.02 -0.41 16 Total: 0.00 -19.87 340.69 2.97 -16.90 By element: Atomic # 1 Polarization: -12.02 SS G_CDS: -0.16 Total: -12.18 kcal Atomic # 6 Polarization: 4.70 SS G_CDS: 3.82 Total: 8.52 kcal Atomic # 7 Polarization: 0.48 SS G_CDS: -2.24 Total: -1.76 kcal Atomic # 8 Polarization: -8.13 SS G_CDS: -1.97 Total: -10.11 kcal Atomic # 9 Polarization: -1.50 SS G_CDS: 1.45 Total: -0.05 kcal Atomic # 14 Polarization: -3.39 SS G_CDS: 2.07 Total: -1.31 kcal Total: -19.87 2.97 -16.90 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17761044_12360598.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -55.298 kcal (2) G-P(sol) polarization free energy of solvation -19.868 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.166 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.970 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.898 kcal (6) G-S(sol) free energy of system = (1) + (5) -72.196 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds