Wall clock time and date at job start Sun Mar 7 2021 08:02:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17403 * 1 3 3 C 1.47206 * 179.97438 * 2 1 4 4 H 1.09000 * 109.46899 * 223.34159 * 3 2 1 5 5 C 1.52999 * 109.47056 * 343.34428 * 3 2 1 6 6 C 1.52997 * 109.47317 * 60.00100 * 5 3 2 7 7 C 1.53000 * 109.47060 * 59.99960 * 6 5 3 8 8 H 1.08992 * 109.47399 * 59.99823 * 7 6 5 9 9 N 1.46499 * 109.46840 * 180.02562 * 7 6 5 10 10 C 1.34778 * 119.99771 * 204.99940 * 9 7 6 11 11 O 1.21279 * 120.00041 * 359.97438 * 10 9 7 12 12 C 1.50703 * 119.99935 * 179.97438 * 10 9 7 13 13 N 1.46501 * 109.47115 * 179.97438 * 12 10 9 14 14 C 1.35037 * 125.92585 * 125.00096 * 13 12 10 15 15 C 1.35087 * 107.97658 * 180.02562 * 14 13 12 16 16 C 1.50703 * 126.07739 * 180.02562 * 15 14 13 17 17 O 1.42902 * 109.47178 * 254.97492 * 16 15 14 18 18 Si 1.86300 * 109.46938 * 14.97121 * 16 15 14 19 19 C 1.40844 * 107.84923 * 359.97438 * 15 14 13 20 20 C 1.48420 * 126.03655 * 180.02562 * 19 15 14 21 21 C 1.39326 * 120.12039 * 324.72246 * 20 19 15 22 22 C 1.38025 * 119.87641 * 179.77122 * 21 20 19 23 23 C 1.38317 * 120.12259 * 0.48703 * 22 21 20 24 24 C 1.38328 * 120.23925 * 359.78611 * 23 22 21 25 25 C 1.38020 * 120.11748 * 359.95901 * 24 23 22 26 26 N 1.31622 * 107.92556 * 359.72178 * 19 15 14 27 27 C 1.53002 * 109.47233 * 299.99657 * 7 6 5 28 28 C 1.52997 * 109.46817 * 60.00194 * 27 7 6 29 29 H 4.18748 * 15.03786 * 359.97438 * 4 2 1 30 30 H 1.08996 * 109.46929 * 299.99203 * 5 3 2 31 31 H 1.09002 * 109.46716 * 180.02562 * 5 3 2 32 32 H 1.09002 * 109.47153 * 299.99641 * 6 5 3 33 33 H 1.09001 * 109.46832 * 179.97438 * 6 5 3 34 34 H 0.97006 * 120.00568 * 24.99713 * 9 7 6 35 35 H 1.08995 * 109.47091 * 300.00103 * 12 10 9 36 36 H 1.08999 * 109.47030 * 59.99811 * 12 10 9 37 37 H 1.08004 * 126.01615 * 0.02562 * 14 13 12 38 38 H 1.08999 * 109.47427 * 134.96902 * 16 15 14 39 39 H 0.96707 * 113.99904 * 59.99734 * 17 16 15 40 40 H 1.48504 * 109.99941 * 58.68241 * 18 16 15 41 41 H 1.48506 * 110.00188 * 180.02562 * 18 16 15 42 42 H 1.08000 * 120.05697 * 359.97438 * 21 20 19 43 43 H 1.07997 * 119.93913 * 180.27504 * 22 21 20 44 44 H 1.07995 * 119.88388 * 179.76800 * 23 22 21 45 45 H 1.07999 * 119.93659 * 179.97438 * 24 23 22 46 46 H 1.08001 * 120.05730 * 180.02562 * 25 24 23 47 47 H 1.08993 * 109.47662 * 180.02562 * 27 7 6 48 48 H 1.09002 * 109.47075 * 300.00932 * 27 7 6 49 49 H 1.09002 * 109.47153 * 60.00231 * 28 27 7 50 50 H 1.09001 * 109.47289 * 180.02562 * 28 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6461 0.0007 0.0000 4 1 3.0090 0.7482 0.7053 5 6 3.1567 -1.3811 0.4134 6 6 2.6472 -2.4304 -0.5766 7 6 3.1571 -2.0972 -1.9802 8 1 4.2470 -2.0967 -1.9802 9 7 2.6687 -3.1016 -2.9283 10 6 3.3454 -3.3357 -4.0701 11 8 4.3584 -2.7146 -4.3128 12 6 2.8434 -4.3694 -5.0451 13 7 3.7468 -4.4340 -6.1966 14 6 4.3621 -5.5433 -6.6596 15 6 5.1069 -5.1908 -7.7301 16 6 5.9613 -6.1144 -8.5597 17 8 7.3384 -5.9028 -8.2422 18 14 5.5035 -7.8823 -8.1910 19 6 4.9420 -3.8070 -7.9340 20 6 5.5798 -3.0000 -9.0040 21 6 6.8721 -3.2998 -9.4297 22 6 7.4585 -2.5490 -10.4284 23 6 6.7696 -1.4942 -10.9993 24 6 5.4884 -1.1886 -10.5765 25 6 4.8905 -1.9362 -9.5822 26 7 4.1174 -3.3571 -7.0121 27 6 2.6464 -0.7155 -2.3937 28 6 3.1559 0.3338 -1.4036 29 1 -1.0500 -0.0003 -0.0009 30 1 2.7936 -1.6183 1.4134 31 1 4.2467 -1.3804 0.4139 32 1 1.5572 -2.4309 -0.5766 33 1 3.0114 -3.4147 -0.2823 34 1 1.8583 -3.5982 -2.7343 35 1 2.8072 -5.3428 -4.5561 36 1 1.8440 -4.0951 -5.3828 37 1 4.2743 -6.5374 -6.2468 38 1 5.7966 -5.9096 -9.6175 39 1 7.5580 -6.0670 -7.3148 40 1 4.0657 -8.1069 -8.4869 41 1 6.3395 -8.8032 -9.0023 42 1 7.4126 -4.1203 -8.9814 43 1 8.4585 -2.7833 -10.7623 44 1 7.2335 -0.9069 -11.7779 45 1 4.9551 -0.3637 -11.0254 46 1 3.8901 -1.6969 -9.2531 47 1 3.0092 -0.4783 -3.3937 48 1 1.5564 -0.7160 -2.3936 49 1 4.2459 0.3343 -1.4037 50 1 2.7917 1.3181 -1.6979 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17761044_12622748.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:02:55 Heat of formation + Delta-G solvation = 93.337685 kcal Electronic energy + Delta-G solvation = -32365.820502 eV Core-core repulsion = 28134.617735 eV Total energy + Delta-G solvation = -4231.202767 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.173 amu Computer time = 1.27 seconds Orbital eigenvalues (eV) -42.42002 -41.13396 -39.71471 -39.38291 -37.72237 -35.78357 -34.72593 -33.21598 -32.22652 -31.93485 -31.71787 -31.31290 -30.43642 -28.47259 -25.93227 -24.48445 -23.84073 -23.56442 -23.25779 -21.78277 -21.67611 -21.38550 -20.79768 -18.84375 -18.52819 -18.06263 -17.63390 -17.55155 -16.84464 -16.76141 -16.39997 -16.12773 -15.93535 -15.68897 -15.51059 -15.44302 -15.31766 -15.23671 -14.65348 -14.37982 -14.16808 -14.12383 -13.99667 -13.88527 -13.77846 -13.52051 -13.33233 -13.23777 -12.95586 -12.40740 -12.37760 -12.28675 -12.27809 -11.94087 -11.82022 -11.80682 -11.56857 -11.40282 -11.19207 -10.99596 -10.92331 -10.52139 -10.24043 -10.12993 -9.64636 -9.60348 -9.12042 -5.06355 0.29662 0.72815 0.85992 1.23179 1.37347 1.48211 1.63999 1.91072 1.91805 1.93641 2.00866 2.03574 3.12579 3.28762 3.33645 3.46630 3.55299 3.63649 3.66065 3.69057 3.76514 3.85735 3.90433 4.03294 4.12181 4.16905 4.26365 4.29485 4.35684 4.39079 4.43491 4.47175 4.51622 4.53941 4.67010 4.74944 4.80218 4.88730 4.92595 4.93748 4.97274 5.00784 5.07663 5.11285 5.19410 5.22616 5.29082 5.39749 5.41814 5.48810 5.79859 5.83199 5.86349 5.89345 6.27772 6.33674 6.67681 6.71176 6.74417 7.09667 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.212 4.212 2 C -0.174 4.174 3 C 0.016 3.984 4 H 0.096 0.904 5 C -0.107 4.107 6 C -0.127 4.127 7 C 0.149 3.851 8 H 0.090 0.910 9 N -0.727 5.727 10 C 0.499 3.501 11 O -0.502 6.502 12 C 0.115 3.885 13 N -0.358 5.358 14 C 0.064 3.936 15 C -0.252 4.252 16 C -0.027 4.027 17 O -0.540 6.540 18 Si 0.685 3.315 19 C 0.133 3.867 20 C -0.022 4.022 21 C -0.099 4.099 22 C -0.125 4.125 23 C -0.113 4.113 24 C -0.127 4.127 25 C -0.093 4.093 26 N -0.250 5.250 27 C -0.130 4.130 28 C -0.109 4.109 29 H 0.215 0.785 30 H 0.074 0.926 31 H 0.077 0.923 32 H 0.071 0.929 33 H 0.072 0.928 34 H 0.400 0.600 35 H 0.129 0.871 36 H 0.116 0.884 37 H 0.180 0.820 38 H 0.113 0.887 39 H 0.378 0.622 40 H -0.256 1.256 41 H -0.254 1.254 42 H 0.157 0.843 43 H 0.125 0.875 44 H 0.122 0.878 45 H 0.123 0.877 46 H 0.122 0.878 47 H 0.070 0.930 48 H 0.066 0.934 49 H 0.077 0.923 50 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.061 -3.939 5.507 7.431 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.229 4.229 2 C -0.174 4.174 3 C -0.002 4.002 4 H 0.113 0.887 5 C -0.145 4.145 6 C -0.165 4.165 7 C 0.045 3.955 8 H 0.108 0.892 9 N -0.379 5.379 10 C 0.282 3.718 11 O -0.374 6.374 12 C -0.010 4.010 13 N -0.139 5.139 14 C -0.081 4.081 15 C -0.264 4.264 16 C -0.139 4.139 17 O -0.345 6.345 18 Si 0.586 3.414 19 C -0.033 4.033 20 C -0.024 4.024 21 C -0.118 4.118 22 C -0.143 4.143 23 C -0.131 4.131 24 C -0.145 4.145 25 C -0.112 4.112 26 N -0.070 5.070 27 C -0.169 4.169 28 C -0.147 4.147 29 H 0.232 0.768 30 H 0.092 0.908 31 H 0.096 0.904 32 H 0.090 0.910 33 H 0.090 0.910 34 H 0.234 0.766 35 H 0.147 0.853 36 H 0.134 0.866 37 H 0.197 0.803 38 H 0.130 0.870 39 H 0.226 0.774 40 H -0.181 1.181 41 H -0.178 1.178 42 H 0.174 0.826 43 H 0.143 0.857 44 H 0.140 0.860 45 H 0.141 0.859 46 H 0.140 0.860 47 H 0.089 0.911 48 H 0.085 0.915 49 H 0.095 0.905 50 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges -3.308 -3.111 4.998 6.753 hybrid contribution -0.623 -0.297 -0.433 0.815 sum -3.932 -3.408 4.565 6.922 Atomic orbital electron populations 1.24924 0.95940 1.01003 1.01043 1.22907 0.94137 1.00189 1.00149 1.18433 0.84927 0.98463 0.98379 0.88653 1.21504 1.01270 0.92773 0.98975 1.21821 1.01707 0.99497 0.93471 1.21002 0.99998 0.87113 0.87354 0.89193 1.45997 1.29395 1.41889 1.20663 1.20512 0.84720 0.84309 0.82220 1.90837 1.23873 1.48347 1.74392 1.21518 0.93606 1.01510 0.84407 1.47837 1.37046 1.05716 1.23318 1.22210 0.96609 0.92784 0.96497 1.20429 1.08593 0.94893 1.02468 1.24292 0.82679 1.06955 0.99996 1.86381 1.23662 1.91807 1.32698 0.95281 0.80239 0.75309 0.90531 1.20629 0.96070 0.91979 0.94621 1.17802 0.94242 0.95566 0.94772 1.21944 0.93838 0.99962 0.96096 1.21143 1.00201 0.95923 0.97053 1.21296 0.94811 0.97372 0.99631 1.21075 0.95653 1.00048 0.97772 1.21211 0.99965 0.94138 0.95889 1.77794 1.17033 1.08228 1.03952 1.21925 1.01257 0.93984 0.99688 1.21526 1.01223 0.99126 0.92804 0.76808 0.90772 0.90388 0.91044 0.90974 0.76552 0.85336 0.86586 0.80295 0.86988 0.77401 1.18121 1.17807 0.82622 0.85727 0.86019 0.85880 0.85996 0.91149 0.91520 0.90485 0.91044 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.21 -0.02 19.25 29.55 0.57 0.55 16 2 C -0.17 -0.08 10.06 -37.12 -0.37 -0.46 16 3 C 0.02 -0.02 3.07 -93.40 -0.29 -0.30 16 4 H 0.10 -0.16 8.14 -51.93 -0.42 -0.59 16 5 C -0.11 0.23 5.43 -26.73 -0.15 0.09 16 6 C -0.13 0.30 5.17 -26.73 -0.14 0.16 16 7 C 0.15 -0.13 2.45 -67.93 -0.17 -0.30 16 8 H 0.09 0.09 7.58 -51.93 -0.39 -0.30 16 9 N -0.73 1.53 5.08 -53.81 -0.27 1.25 16 10 C 0.50 0.26 7.82 -10.98 -0.09 0.17 16 11 O -0.50 -2.89 15.38 5.56 0.09 -2.81 16 12 C 0.12 -0.27 6.98 -5.19 -0.04 -0.31 16 13 N -0.36 -0.57 3.39 -62.58 -0.21 -0.78 16 14 C 0.06 -0.01 9.96 -17.26 -0.17 -0.18 16 15 C -0.25 -0.47 5.34 -104.76 -0.56 -1.03 16 16 C -0.03 -0.01 2.00 36.01 0.07 0.06 16 17 O -0.54 -0.15 10.10 -35.23 -0.36 -0.51 16 18 Si 0.68 -0.96 30.74 -169.99 -5.23 -6.19 16 19 C 0.13 0.64 6.74 -82.78 -0.56 0.08 16 20 C -0.02 -0.11 5.80 -104.89 -0.61 -0.72 16 21 C -0.10 -0.41 8.94 -39.25 -0.35 -0.76 16 22 C -0.13 -0.39 10.03 -39.63 -0.40 -0.78 16 23 C -0.11 -0.31 10.04 -39.52 -0.40 -0.70 16 24 C -0.13 -0.41 10.03 -39.63 -0.40 -0.80 16 25 C -0.09 -0.42 9.75 -39.26 -0.38 -0.80 16 26 N -0.25 -1.35 11.65 33.43 0.39 -0.96 16 27 C -0.13 -0.03 5.27 -26.73 -0.14 -0.17 16 28 C -0.11 0.06 5.43 -26.73 -0.15 -0.09 16 29 H 0.22 -0.54 7.80 -54.09 -0.42 -0.96 16 30 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 31 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 32 H 0.07 -0.15 7.23 -51.93 -0.38 -0.52 16 33 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 34 H 0.40 -2.07 8.60 -40.82 -0.35 -2.42 16 35 H 0.13 -0.86 8.07 -51.93 -0.42 -1.28 16 36 H 0.12 -0.47 8.14 -51.93 -0.42 -0.89 16 37 H 0.18 -0.84 6.40 -52.48 -0.34 -1.17 16 38 H 0.11 0.19 7.84 -51.93 -0.41 -0.22 16 39 H 0.38 -1.23 8.70 45.56 0.40 -0.84 16 40 H -0.26 -0.25 7.11 56.52 0.40 0.15 16 41 H -0.25 -0.50 7.11 56.52 0.40 -0.10 16 42 H 0.16 0.55 4.53 -52.49 -0.24 0.31 16 43 H 0.12 0.15 8.06 -52.49 -0.42 -0.27 16 44 H 0.12 0.07 8.06 -52.49 -0.42 -0.35 16 45 H 0.12 0.15 8.06 -52.49 -0.42 -0.28 16 46 H 0.12 0.51 8.06 -52.49 -0.42 0.09 16 47 H 0.07 0.18 8.14 -51.93 -0.42 -0.24 16 48 H 0.07 0.04 7.23 -51.93 -0.38 -0.34 16 49 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 50 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 LS Contribution 411.48 15.07 6.20 6.20 Total: 0.00 -11.83 411.48 -11.28 -23.11 By element: Atomic # 1 Polarization: -5.83 SS G_CDS: -7.19 Total: -13.02 kcal Atomic # 6 Polarization: -1.59 SS G_CDS: -4.70 Total: -6.29 kcal Atomic # 7 Polarization: -0.40 SS G_CDS: -0.10 Total: -0.50 kcal Atomic # 8 Polarization: -3.05 SS G_CDS: -0.27 Total: -3.32 kcal Atomic # 14 Polarization: -0.96 SS G_CDS: -5.23 Total: -6.19 kcal Total LS contribution 6.20 Total: 6.20 kcal Total: -11.83 -11.28 -23.11 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17761044_12622748.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 116.447 kcal (2) G-P(sol) polarization free energy of solvation -11.826 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 104.620 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.283 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.109 kcal (6) G-S(sol) free energy of system = (1) + (5) 93.338 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds