Wall clock time and date at job start Sun Mar 7 2021 08:04:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17395 * 1 3 3 C 1.47205 * 179.97438 * 2 1 4 4 H 1.09005 * 109.46715 * 163.54657 * 3 2 1 5 5 C 1.53002 * 109.46929 * 283.54246 * 3 2 1 6 6 C 1.53002 * 109.47136 * 60.00379 * 5 3 2 7 7 C 1.53000 * 109.47000 * 59.99854 * 6 5 3 8 8 H 1.08996 * 109.46933 * 59.99983 * 7 6 5 9 9 N 1.46500 * 109.46858 * 179.97438 * 7 6 5 10 10 C 1.34770 * 120.00235 * 274.99850 * 9 7 6 11 11 O 1.21290 * 120.00032 * 0.02562 * 10 9 7 12 12 C 1.50696 * 120.00142 * 179.97438 * 10 9 7 13 13 C 1.53004 * 109.47457 * 180.02562 * 12 10 9 14 14 O 1.42894 * 109.47177 * 180.02562 * 13 12 10 15 15 C 1.35899 * 116.99856 * 180.02562 * 14 13 12 16 16 C 1.38729 * 120.05859 * 179.97438 * 15 14 13 17 17 C 1.38150 * 119.95038 * 180.02562 * 16 15 14 18 18 C 1.38265 * 120.04950 * 0.02562 * 17 16 15 19 19 C 1.50703 * 119.94136 * 179.97438 * 18 17 16 20 20 O 1.42896 * 109.47055 * 300.00303 * 19 18 17 21 21 Si 1.86304 * 109.46911 * 180.02562 * 19 18 17 22 22 C 1.38271 * 120.11462 * 0.25426 * 18 17 16 23 23 C 1.38145 * 120.04946 * 359.44874 * 22 18 17 24 24 C 1.53001 * 109.46926 * 300.00107 * 7 6 5 25 25 C 1.52989 * 109.47347 * 60.00242 * 24 7 6 26 26 H 4.18741 * 15.03893 * 359.97438 * 4 2 1 27 27 H 1.08996 * 109.47077 * 180.02562 * 5 3 2 28 28 H 1.09001 * 109.47216 * 299.99827 * 5 3 2 29 29 H 1.08999 * 109.46920 * 299.99705 * 6 5 3 30 30 H 1.09001 * 109.46900 * 179.97438 * 6 5 3 31 31 H 0.97003 * 119.99591 * 95.00455 * 9 7 6 32 32 H 1.09001 * 109.46816 * 60.00467 * 12 10 9 33 33 H 1.08997 * 109.47326 * 300.00355 * 12 10 9 34 34 H 1.08998 * 109.46749 * 59.99785 * 13 12 10 35 35 H 1.09004 * 109.46620 * 300.00549 * 13 12 10 36 36 H 1.08007 * 120.02564 * 0.04577 * 16 15 14 37 37 H 1.07997 * 119.97457 * 180.02562 * 17 16 15 38 38 H 1.09002 * 109.47152 * 60.00111 * 19 18 17 39 39 H 0.96708 * 114.00101 * 299.99358 * 20 19 18 40 40 H 1.48497 * 110.00028 * 58.68223 * 21 19 18 41 41 H 1.48501 * 109.99652 * 179.97438 * 21 19 18 42 42 H 1.07998 * 119.96980 * 179.70625 * 22 18 17 43 43 H 1.08009 * 120.02002 * 180.25264 * 23 22 18 44 44 H 1.08999 * 109.46423 * 180.02562 * 24 7 6 45 45 H 1.09001 * 109.46792 * 299.99517 * 24 7 6 46 46 H 1.09001 * 109.47767 * 59.99872 * 25 24 7 47 47 H 1.08999 * 109.47447 * 179.97438 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1739 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 1 3.0088 0.9865 -0.2911 5 6 3.1561 -0.3369 1.4024 6 6 2.6468 -1.7206 1.8110 7 6 3.1573 -2.7659 0.8173 8 1 4.2473 -2.7653 0.8173 9 7 2.6701 -4.0908 1.2089 10 6 3.3477 -4.8155 2.1211 11 8 4.3606 -4.3706 2.6182 12 6 2.8462 -6.1782 2.5244 13 6 3.7907 -6.7817 3.5658 14 8 3.3155 -8.0740 3.9477 15 6 4.0452 -8.7511 4.8728 16 6 3.6413 -10.0111 5.2900 17 6 4.3846 -10.6972 6.2309 18 6 5.5299 -10.1289 6.7572 19 6 6.3385 -10.8793 7.7840 20 8 5.5260 -11.1444 8.9292 21 14 7.8074 -9.8512 8.2899 22 6 5.9314 -8.8708 6.3475 23 6 5.1949 -8.1833 5.4023 24 6 2.6472 -2.4282 -0.5851 25 6 3.1565 -1.0447 -0.9937 26 1 -1.0500 -0.0011 -0.0002 27 1 4.2461 -0.3360 1.4026 28 1 2.7925 0.4079 2.1104 29 1 1.5568 -1.7211 1.8110 30 1 3.0106 -1.9612 2.8100 31 1 1.8599 -4.4466 0.8116 32 1 2.8095 -6.8257 1.6483 33 1 1.8472 -6.0862 2.9504 34 1 3.8271 -6.1340 4.4418 35 1 4.7900 -6.8735 3.1401 36 1 2.7467 -10.4554 4.8792 37 1 4.0708 -11.6783 6.5556 38 1 6.6834 -11.8212 7.3573 39 1 5.1835 -10.3498 9.3610 40 1 7.3509 -8.5513 8.8442 41 1 8.6127 -10.5799 9.3027 42 1 6.8238 -8.4271 6.7636 43 1 5.5113 -7.2023 5.0795 44 1 3.0106 -3.1732 -1.2929 45 1 1.5572 -2.4289 -0.5851 46 1 4.2465 -1.0441 -0.9937 47 1 2.7935 -0.8043 -1.9929 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17761044_4549602.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:04:26 Heat of formation + Delta-G solvation = -37.866366 kcal Electronic energy + Delta-G solvation = -26898.520794 eV Core-core repulsion = 23014.014263 eV Total energy + Delta-G solvation = -3884.506531 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 330.166 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -41.45468 -41.05886 -39.69072 -39.07197 -37.23345 -35.79346 -33.63915 -32.97980 -32.01143 -31.94541 -31.44597 -30.20244 -26.61748 -25.66531 -24.10340 -23.83053 -23.21751 -22.15471 -21.73582 -21.30026 -19.50715 -18.49754 -18.32018 -17.66664 -17.56522 -17.46463 -16.93512 -16.41069 -16.31006 -16.15603 -15.96013 -15.59799 -15.48355 -15.36285 -14.81688 -14.67513 -14.43731 -14.25488 -14.19814 -13.95380 -13.70014 -13.39703 -13.32413 -12.99768 -12.87821 -12.85228 -12.39292 -12.29093 -12.15922 -12.02810 -11.83041 -11.78412 -11.57360 -11.53678 -11.09919 -11.00133 -10.82849 -10.54778 -10.12735 -9.98130 -9.15252 -4.92496 0.34390 0.36737 1.33417 1.52567 1.63165 1.68504 1.90746 1.93624 1.99834 2.45062 2.71417 3.31788 3.41982 3.48288 3.59539 3.67402 3.73942 3.81651 3.85391 3.85908 3.91369 3.99591 4.02650 4.11441 4.26654 4.32239 4.35094 4.38150 4.40410 4.44581 4.53812 4.58016 4.58604 4.63565 4.74127 4.77620 4.92684 4.93633 5.00573 5.00853 5.07004 5.08834 5.20661 5.23167 5.28732 5.34173 5.42780 5.54243 5.76127 6.34292 6.40003 6.44840 6.70835 7.09874 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.212 4.212 2 C -0.175 4.175 3 C 0.016 3.984 4 H 0.096 0.904 5 C -0.109 4.109 6 C -0.130 4.130 7 C 0.146 3.854 8 H 0.091 0.909 9 N -0.725 5.725 10 C 0.521 3.479 11 O -0.538 6.538 12 C -0.142 4.142 13 C 0.074 3.926 14 O -0.316 6.316 15 C 0.138 3.862 16 C -0.151 4.151 17 C -0.053 4.053 18 C -0.157 4.157 19 C -0.069 4.069 20 O -0.531 6.531 21 Si 0.681 3.319 22 C -0.075 4.075 23 C -0.203 4.203 24 C -0.128 4.128 25 C -0.107 4.107 26 H 0.215 0.785 27 H 0.077 0.923 28 H 0.071 0.929 29 H 0.066 0.934 30 H 0.069 0.931 31 H 0.402 0.598 32 H 0.107 0.893 33 H 0.106 0.894 34 H 0.072 0.928 35 H 0.074 0.926 36 H 0.133 0.867 37 H 0.133 0.867 38 H 0.118 0.882 39 H 0.376 0.624 40 H -0.261 1.261 41 H -0.257 1.257 42 H 0.129 0.871 43 H 0.134 0.866 44 H 0.072 0.928 45 H 0.071 0.929 46 H 0.078 0.922 47 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.337 1.831 -4.564 5.097 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.228 4.228 2 C -0.175 4.175 3 C -0.002 4.002 4 H 0.113 0.887 5 C -0.147 4.147 6 C -0.169 4.169 7 C 0.042 3.958 8 H 0.109 0.891 9 N -0.376 5.376 10 C 0.307 3.693 11 O -0.414 6.414 12 C -0.182 4.182 13 C -0.001 4.001 14 O -0.230 6.230 15 C 0.092 3.908 16 C -0.170 4.170 17 C -0.071 4.071 18 C -0.158 4.158 19 C -0.179 4.179 20 O -0.337 6.337 21 Si 0.582 3.418 22 C -0.093 4.093 23 C -0.221 4.221 24 C -0.166 4.166 25 C -0.145 4.145 26 H 0.232 0.768 27 H 0.095 0.905 28 H 0.089 0.911 29 H 0.085 0.915 30 H 0.088 0.912 31 H 0.236 0.764 32 H 0.125 0.875 33 H 0.125 0.875 34 H 0.091 0.909 35 H 0.092 0.908 36 H 0.151 0.849 37 H 0.151 0.849 38 H 0.135 0.865 39 H 0.223 0.777 40 H -0.186 1.186 41 H -0.183 1.183 42 H 0.147 0.853 43 H 0.152 0.848 44 H 0.090 0.910 45 H 0.089 0.911 46 H 0.096 0.904 47 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges -0.208 1.890 -3.810 4.258 hybrid contribution -1.636 0.234 0.435 1.709 sum -1.845 2.124 -3.375 4.394 Atomic orbital electron populations 1.24930 0.95954 1.01283 1.00675 1.22904 0.94145 1.00014 1.00405 1.18429 0.84930 1.00306 0.96524 0.88650 1.21526 1.01217 0.96852 0.95082 1.21932 1.01326 0.94180 0.99430 1.21029 1.00067 0.81049 0.93682 0.89104 1.46044 1.29353 1.18599 1.43616 1.20280 0.83720 0.86342 0.78932 1.90750 1.24761 1.72137 1.53788 1.21478 1.01543 0.94170 1.01027 1.22426 0.97694 0.81983 0.98039 1.85976 1.50512 1.30832 1.55686 1.18994 0.90611 0.91915 0.89240 1.20506 1.02437 0.93200 1.00813 1.20830 0.93062 0.99470 0.93779 1.20183 0.98477 0.95762 1.01339 1.24936 1.00235 1.06411 0.86301 1.86590 1.68360 1.35828 1.42969 0.95062 0.80752 0.77871 0.88097 1.20807 0.98544 0.93723 0.96204 1.21269 0.96962 1.02110 1.01794 1.21823 1.01740 0.97661 0.95368 1.21503 1.01262 0.93098 0.98657 0.76797 0.90462 0.91050 0.91482 0.91213 0.76359 0.87456 0.87537 0.90936 0.90786 0.84880 0.84896 0.86467 0.77683 1.18584 1.18252 0.85349 0.84791 0.90954 0.91051 0.90374 0.90777 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.21 -0.01 19.25 29.55 0.57 0.56 16 2 C -0.17 -0.06 10.06 -37.12 -0.37 -0.44 16 3 C 0.02 -0.02 3.07 -93.41 -0.29 -0.31 16 4 H 0.10 -0.19 8.14 -51.93 -0.42 -0.61 16 5 C -0.11 0.12 5.43 -26.73 -0.15 -0.03 16 6 C -0.13 0.04 5.27 -26.73 -0.14 -0.10 16 7 C 0.15 -0.14 2.45 -67.93 -0.17 -0.31 16 8 H 0.09 0.05 7.58 -51.93 -0.39 -0.34 16 9 N -0.73 1.22 5.08 -53.81 -0.27 0.95 16 10 C 0.52 0.10 7.79 -10.99 -0.09 0.02 16 11 O -0.54 -2.13 15.64 5.55 0.09 -2.05 16 12 C -0.14 0.26 6.07 -27.88 -0.17 0.09 16 13 C 0.07 0.01 4.03 37.16 0.15 0.16 16 14 O -0.32 -0.51 10.14 -19.42 -0.20 -0.71 16 15 C 0.14 0.27 6.69 -39.22 -0.26 0.01 16 16 C -0.15 -0.22 9.99 -39.43 -0.39 -0.62 16 17 C -0.05 -0.06 9.60 -39.60 -0.38 -0.44 16 18 C -0.16 -0.14 5.39 -104.60 -0.56 -0.71 16 19 C -0.07 -0.03 2.82 36.01 0.10 0.08 16 20 O -0.53 -0.93 12.77 -35.23 -0.45 -1.38 16 21 Si 0.68 -0.18 29.78 -169.99 -5.06 -5.24 16 22 C -0.08 -0.05 8.66 -39.60 -0.34 -0.40 16 23 C -0.20 -0.26 9.04 -39.43 -0.36 -0.61 16 24 C -0.13 0.27 5.17 -26.74 -0.14 0.14 16 25 C -0.11 0.23 5.43 -26.74 -0.15 0.09 16 26 H 0.22 -0.54 7.80 -54.09 -0.42 -0.97 16 27 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 28 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 29 H 0.07 0.01 7.23 -51.93 -0.38 -0.36 16 30 H 0.07 0.09 8.14 -51.93 -0.42 -0.33 16 31 H 0.40 -1.64 8.60 -40.82 -0.35 -1.99 16 32 H 0.11 -0.35 8.14 -51.93 -0.42 -0.77 16 33 H 0.11 -0.33 8.14 -51.93 -0.42 -0.75 16 34 H 0.07 0.04 7.62 -51.93 -0.40 -0.35 16 35 H 0.07 0.03 7.62 -51.93 -0.40 -0.37 16 36 H 0.13 0.04 8.06 -52.48 -0.42 -0.39 16 37 H 0.13 0.03 8.06 -52.49 -0.42 -0.39 16 38 H 0.12 -0.05 7.96 -51.93 -0.41 -0.46 16 39 H 0.38 -0.35 8.70 45.56 0.40 0.05 16 40 H -0.26 -0.47 7.10 56.52 0.40 -0.07 16 41 H -0.26 -0.77 7.11 56.52 0.40 -0.37 16 42 H 0.13 -0.13 4.87 -52.49 -0.26 -0.38 16 43 H 0.13 0.03 6.30 -52.48 -0.33 -0.30 16 44 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 45 H 0.07 -0.12 7.23 -51.93 -0.38 -0.50 16 46 H 0.08 -0.22 8.14 -51.93 -0.42 -0.65 16 47 H 0.07 -0.16 8.14 -51.93 -0.42 -0.59 16 LS Contribution 384.73 15.07 5.80 5.80 Total: 0.00 -7.59 384.73 -10.39 -17.97 By element: Atomic # 1 Polarization: -5.37 SS G_CDS: -7.16 Total: -12.53 kcal Atomic # 6 Polarization: 0.32 SS G_CDS: -3.13 Total: -2.81 kcal Atomic # 7 Polarization: 1.22 SS G_CDS: -0.27 Total: 0.95 kcal Atomic # 8 Polarization: -3.57 SS G_CDS: -0.56 Total: -4.13 kcal Atomic # 14 Polarization: -0.18 SS G_CDS: -5.06 Total: -5.24 kcal Total LS contribution 5.80 Total: 5.80 kcal Total: -7.59 -10.39 -17.97 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17761044_4549602.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -19.892 kcal (2) G-P(sol) polarization free energy of solvation -7.586 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -27.478 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.388 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.974 kcal (6) G-S(sol) free energy of system = (1) + (5) -37.866 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds