Wall clock time and date at job start Sun Mar 7 2021 08:04:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17402 * 1 3 3 C 1.47203 * 179.97438 * 2 1 4 4 H 1.09002 * 109.46965 * 115.33720 * 3 2 1 5 5 C 1.52997 * 109.46901 * 235.33526 * 3 2 1 6 6 C 1.53006 * 109.47127 * 60.00439 * 5 3 2 7 7 C 1.52997 * 109.47164 * 59.99836 * 6 5 3 8 8 H 1.09001 * 109.47375 * 59.99966 * 7 6 5 9 9 N 1.46496 * 109.46941 * 179.97438 * 7 6 5 10 10 C 1.34777 * 120.00037 * 204.99725 * 9 7 6 11 11 O 1.21275 * 119.99888 * 0.02562 * 10 9 7 12 12 C 1.50706 * 119.99882 * 180.02562 * 10 9 7 13 13 C 1.53005 * 109.46898 * 179.97438 * 12 10 9 14 14 C 1.52996 * 109.46710 * 179.97438 * 13 12 10 15 15 O 1.42902 * 109.46723 * 179.97438 * 14 13 12 16 16 C 1.35900 * 116.99900 * 179.97438 * 15 14 13 17 17 C 1.38711 * 120.05857 * 180.02562 * 16 15 14 18 18 C 1.38166 * 119.94977 * 180.02562 * 17 16 15 19 19 C 1.50700 * 119.97294 * 180.02562 * 18 17 16 20 20 O 1.42894 * 109.47443 * 300.00241 * 19 18 17 21 21 Si 1.86299 * 109.46945 * 180.02562 * 19 18 17 22 22 C 1.38244 * 120.05194 * 0.02562 * 18 17 16 23 23 C 1.38288 * 120.11073 * 359.96953 * 22 18 17 24 24 C 1.38124 * 120.05986 * 359.77397 * 23 22 18 25 25 C 1.53002 * 109.46978 * 299.99874 * 7 6 5 26 26 C 1.52996 * 109.46891 * 60.00410 * 25 7 6 27 27 H 4.18736 * 15.03872 * 0.02562 * 4 2 1 28 28 H 1.08998 * 109.47533 * 179.97438 * 5 3 2 29 29 H 1.08996 * 109.47853 * 300.00280 * 5 3 2 30 30 H 1.09000 * 109.47050 * 179.97438 * 6 5 3 31 31 H 1.09001 * 109.47002 * 299.99574 * 6 5 3 32 32 H 0.97005 * 120.00318 * 25.00578 * 9 7 6 33 33 H 1.08997 * 109.47332 * 300.00091 * 12 10 9 34 34 H 1.09001 * 109.47171 * 60.00055 * 12 10 9 35 35 H 1.08997 * 109.47232 * 300.00187 * 13 12 10 36 36 H 1.09001 * 109.47137 * 60.00069 * 13 12 10 37 37 H 1.08997 * 109.47605 * 300.00178 * 14 13 12 38 38 H 1.09006 * 109.47007 * 60.00760 * 14 13 12 39 39 H 1.08000 * 120.02432 * 0.02787 * 17 16 15 40 40 H 1.09002 * 109.46696 * 60.00904 * 19 18 17 41 41 H 0.96699 * 114.00507 * 300.00165 * 20 19 18 42 42 H 1.48504 * 109.99834 * 58.68163 * 21 19 18 43 43 H 1.48499 * 110.00268 * 180.02562 * 21 19 18 44 44 H 1.07997 * 119.94153 * 179.97438 * 22 18 17 45 45 H 1.08002 * 119.96880 * 180.02562 * 23 22 18 46 46 H 1.07993 * 120.03256 * 180.27491 * 24 23 22 47 47 H 1.09004 * 109.47006 * 180.02562 * 25 7 6 48 48 H 1.08992 * 109.47056 * 300.00064 * 25 7 6 49 49 H 1.09004 * 109.47368 * 179.97438 * 26 25 7 50 50 H 1.09001 * 109.47372 * 59.99964 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 1 3.0092 0.4406 -0.9288 5 6 3.1556 0.8213 1.1864 6 6 2.6459 0.2037 2.4902 7 6 3.1566 -1.2337 2.6075 8 1 4.2467 -1.2332 2.6075 9 7 2.6691 -1.8248 3.8561 10 6 3.3466 -2.8377 4.4318 11 8 4.3600 -3.2596 3.9163 12 6 2.8447 -3.4462 5.7160 13 6 3.7892 -4.5682 6.1520 14 6 3.2800 -5.1854 7.4560 15 8 4.1618 -6.2337 7.8629 16 6 3.8512 -6.8901 9.0117 17 6 4.6639 -7.9183 9.4658 18 6 4.3458 -8.5845 10.6337 19 6 5.2287 -9.7013 11.1279 20 8 5.2837 -10.7360 10.1440 21 14 4.5317 -10.3888 12.7129 22 6 3.2182 -8.2272 11.3493 23 6 2.4063 -7.2024 10.8987 24 6 2.7229 -6.5299 9.7346 25 6 2.6470 -2.0544 1.4210 26 6 3.1567 -1.4368 0.1173 27 1 -1.0499 0.0002 0.0006 28 1 4.2456 0.8215 1.1868 29 1 2.7918 1.8454 1.1030 30 1 3.0093 0.7882 3.3355 31 1 1.5559 0.2032 2.4903 32 1 1.8586 -1.4872 4.2686 33 1 2.8077 -2.6804 6.4907 34 1 1.8457 -3.8530 5.5592 35 1 3.8258 -5.3339 5.3771 36 1 4.7884 -4.1617 6.3086 37 1 3.2437 -4.4195 8.2307 38 1 2.2807 -5.5919 7.2997 39 1 5.5447 -8.1980 8.9069 40 1 6.2329 -9.3177 11.3085 41 1 4.4236 -11.1244 9.9330 42 1 3.1508 -10.8861 12.4869 43 1 5.3936 -11.4907 13.2111 44 1 2.9709 -8.7494 12.2618 45 1 1.5262 -6.9250 11.4598 46 1 2.0911 -5.7267 9.3854 47 1 3.0105 -3.0786 1.5048 48 1 1.5571 -2.0549 1.4211 49 1 2.7940 -2.0217 -0.7280 50 1 4.2467 -1.4363 0.1173 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17761044_4549616.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:04:32 Heat of formation + Delta-G solvation = -43.995590 kcal Electronic energy + Delta-G solvation = -28424.666190 eV Core-core repulsion = 24384.356257 eV Total energy + Delta-G solvation = -4040.309934 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.182 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -41.32833 -41.11825 -39.63722 -39.13714 -37.35986 -35.76833 -34.90418 -33.14377 -32.45243 -31.91701 -31.31627 -30.43432 -28.18779 -26.79600 -24.40672 -23.80817 -23.67378 -23.09748 -21.86584 -21.69008 -21.22657 -19.21851 -18.53928 -17.93023 -17.86093 -17.50757 -17.40596 -17.15733 -16.82044 -16.43964 -16.27886 -16.11010 -15.52099 -15.50265 -15.38432 -15.04396 -14.78885 -14.59267 -14.26294 -14.06895 -13.99340 -13.82191 -13.37108 -13.32894 -13.24366 -13.03828 -12.93316 -12.73673 -12.39852 -12.35941 -12.28163 -12.25477 -11.90488 -11.79611 -11.66283 -11.54170 -11.53545 -11.04047 -10.97903 -10.74187 -10.63042 -10.05266 -9.90115 -9.20846 -4.93843 0.23260 0.44087 1.28790 1.62235 1.64181 1.87725 1.91930 1.94767 1.99335 2.34449 2.69740 3.33236 3.39134 3.51192 3.64166 3.67025 3.70616 3.78611 3.81002 3.88920 3.94220 4.02306 4.04892 4.12230 4.15323 4.19099 4.22099 4.26021 4.38149 4.40400 4.40983 4.43600 4.49114 4.57129 4.58045 4.67545 4.77066 4.94784 4.95934 4.96305 4.99892 5.03361 5.10347 5.11440 5.15652 5.24019 5.30099 5.32175 5.39371 5.46351 5.49906 5.72070 6.42464 6.43310 6.45861 6.71944 7.22043 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.213 4.213 2 C -0.174 4.174 3 C 0.016 3.984 4 H 0.095 0.905 5 C -0.107 4.107 6 C -0.127 4.127 7 C 0.145 3.855 8 H 0.090 0.910 9 N -0.729 5.729 10 C 0.515 3.485 11 O -0.534 6.534 12 C -0.138 4.138 13 C -0.105 4.105 14 C 0.060 3.940 15 O -0.311 6.311 16 C 0.132 3.868 17 C -0.126 4.126 18 C -0.079 4.079 19 C -0.077 4.077 20 O -0.528 6.528 21 Si 0.689 3.311 22 C -0.156 4.156 23 C -0.074 4.074 24 C -0.205 4.205 25 C -0.130 4.130 26 C -0.109 4.109 27 H 0.215 0.785 28 H 0.078 0.922 29 H 0.073 0.927 30 H 0.071 0.929 31 H 0.070 0.930 32 H 0.400 0.600 33 H 0.098 0.902 34 H 0.097 0.903 35 H 0.083 0.917 36 H 0.084 0.916 37 H 0.064 0.936 38 H 0.063 0.937 39 H 0.134 0.866 40 H 0.120 0.880 41 H 0.376 0.624 42 H -0.260 1.260 43 H -0.257 1.257 44 H 0.129 0.871 45 H 0.130 0.870 46 H 0.129 0.871 47 H 0.069 0.931 48 H 0.066 0.934 49 H 0.071 0.929 50 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.960 5.061 2.285 7.446 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.230 4.230 2 C -0.174 4.174 3 C -0.002 4.002 4 H 0.113 0.887 5 C -0.145 4.145 6 C -0.165 4.165 7 C 0.041 3.959 8 H 0.108 0.892 9 N -0.380 5.380 10 C 0.301 3.699 11 O -0.410 6.410 12 C -0.178 4.178 13 C -0.143 4.143 14 C -0.016 4.016 15 O -0.225 6.225 16 C 0.087 3.913 17 C -0.145 4.145 18 C -0.080 4.080 19 C -0.186 4.186 20 O -0.334 6.334 21 Si 0.590 3.410 22 C -0.174 4.174 23 C -0.092 4.092 24 C -0.224 4.224 25 C -0.168 4.168 26 C -0.147 4.147 27 H 0.232 0.768 28 H 0.096 0.904 29 H 0.092 0.908 30 H 0.090 0.910 31 H 0.089 0.911 32 H 0.234 0.766 33 H 0.116 0.884 34 H 0.115 0.885 35 H 0.102 0.898 36 H 0.102 0.898 37 H 0.083 0.917 38 H 0.082 0.918 39 H 0.152 0.848 40 H 0.138 0.862 41 H 0.224 0.776 42 H -0.185 1.185 43 H -0.182 1.182 44 H 0.146 0.854 45 H 0.148 0.852 46 H 0.147 0.853 47 H 0.088 0.912 48 H 0.084 0.916 49 H 0.089 0.911 50 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges -3.725 4.165 2.207 6.008 hybrid contribution -1.427 -0.130 -0.836 1.659 sum -5.153 4.035 1.371 6.687 Atomic orbital electron populations 1.24922 0.95944 1.00834 1.01265 1.22915 0.94151 1.00283 1.00009 1.18429 0.84912 0.97046 0.99804 0.88664 1.21507 1.01268 0.99043 0.92714 1.21822 1.01651 0.94641 0.98425 1.21004 1.00028 0.91963 0.82891 0.89209 1.46104 1.29373 1.36628 1.25928 1.20563 0.83797 0.79556 0.85998 1.90747 1.24665 1.60872 1.64697 1.21537 1.01133 0.99298 0.95874 1.21227 1.00007 0.97441 0.95601 1.22828 0.93060 0.88664 0.97002 1.86089 1.50980 1.47616 1.37791 1.19027 0.93734 0.92513 0.86054 1.20274 1.01070 0.95792 0.97352 1.20086 0.95748 0.97202 0.94932 1.25094 1.04482 0.88274 1.00793 1.86609 1.35166 1.52480 1.59176 0.94917 0.78883 0.85976 0.81203 1.20915 0.95853 1.00035 1.00566 1.20908 0.98797 0.94386 0.95084 1.21318 0.98784 1.03930 0.98346 1.21923 1.01235 0.99806 0.93850 1.21526 1.01228 0.94112 0.97824 0.76808 0.90383 0.90818 0.91029 0.91119 0.76599 0.88393 0.88453 0.89831 0.89775 0.91728 0.91835 0.84793 0.86181 0.77613 1.18513 1.18212 0.85404 0.85225 0.85271 0.91225 0.91567 0.91074 0.90468 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.21 -0.05 19.25 29.55 0.57 0.52 16 2 C -0.17 -0.11 10.06 -37.12 -0.37 -0.48 16 3 C 0.02 -0.01 3.07 -93.41 -0.29 -0.30 16 4 H 0.10 -0.16 8.14 -51.93 -0.42 -0.58 16 5 C -0.11 0.20 5.43 -26.73 -0.15 0.05 16 6 C -0.13 0.23 5.17 -26.73 -0.14 0.09 16 7 C 0.15 -0.07 2.45 -67.93 -0.17 -0.23 16 8 H 0.09 0.12 7.58 -51.93 -0.39 -0.28 16 9 N -0.73 0.95 5.08 -53.81 -0.27 0.68 16 10 C 0.51 0.36 7.79 -10.98 -0.09 0.27 16 11 O -0.53 -2.74 15.64 5.56 0.09 -2.65 16 12 C -0.14 0.34 5.70 -27.88 -0.16 0.18 16 13 C -0.10 0.02 4.87 -26.73 -0.13 -0.11 16 14 C 0.06 -0.05 4.74 37.16 0.18 0.13 16 15 O -0.31 -0.80 10.14 -19.42 -0.20 -0.99 16 16 C 0.13 0.29 6.69 -39.22 -0.26 0.03 16 17 C -0.13 -0.30 9.55 -39.43 -0.38 -0.68 16 18 C -0.08 -0.08 5.39 -104.65 -0.56 -0.65 16 19 C -0.08 -0.03 2.82 36.01 0.10 0.07 16 20 O -0.53 -1.06 12.77 -35.23 -0.45 -1.51 16 21 Si 0.69 -0.45 29.78 -169.99 -5.06 -5.51 16 22 C -0.16 0.00 8.67 -39.56 -0.34 -0.35 16 23 C -0.07 0.02 10.04 -39.60 -0.40 -0.38 16 24 C -0.21 -0.08 9.04 -39.43 -0.36 -0.44 16 25 C -0.13 -0.02 5.27 -26.73 -0.14 -0.16 16 26 C -0.11 0.07 5.43 -26.73 -0.15 -0.08 16 27 H 0.22 -0.52 7.80 -54.09 -0.42 -0.94 16 28 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 29 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 30 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 31 H 0.07 -0.10 7.23 -51.93 -0.38 -0.48 16 32 H 0.40 -1.56 8.60 -40.82 -0.35 -1.92 16 33 H 0.10 -0.44 8.14 -51.93 -0.42 -0.86 16 34 H 0.10 -0.42 8.14 -51.93 -0.42 -0.84 16 35 H 0.08 0.12 8.10 -51.93 -0.42 -0.30 16 36 H 0.08 0.11 8.10 -51.93 -0.42 -0.31 16 37 H 0.06 -0.14 7.65 -51.93 -0.40 -0.54 16 38 H 0.06 -0.13 7.67 -51.93 -0.40 -0.53 16 39 H 0.13 0.37 8.06 -52.49 -0.42 -0.05 16 40 H 0.12 -0.03 7.96 -51.93 -0.41 -0.44 16 41 H 0.38 -0.32 8.70 45.56 0.40 0.08 16 42 H -0.26 -0.32 7.11 56.52 0.40 0.08 16 43 H -0.26 -0.67 7.11 56.52 0.40 -0.27 16 44 H 0.13 -0.23 4.87 -52.49 -0.26 -0.49 16 45 H 0.13 -0.33 8.06 -52.49 -0.42 -0.75 16 46 H 0.13 -0.22 6.30 -52.49 -0.33 -0.55 16 47 H 0.07 0.14 8.14 -51.93 -0.42 -0.29 16 48 H 0.07 0.04 7.23 -51.93 -0.38 -0.34 16 49 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 50 H 0.08 -0.08 8.14 -51.93 -0.42 -0.51 16 LS Contribution 406.24 15.07 6.12 6.12 Total: 0.00 -8.69 406.24 -11.00 -19.69 By element: Atomic # 1 Polarization: -5.31 SS G_CDS: -8.01 Total: -13.31 kcal Atomic # 6 Polarization: 0.72 SS G_CDS: -3.22 Total: -2.51 kcal Atomic # 7 Polarization: 0.95 SS G_CDS: -0.27 Total: 0.68 kcal Atomic # 8 Polarization: -4.60 SS G_CDS: -0.56 Total: -5.16 kcal Atomic # 14 Polarization: -0.45 SS G_CDS: -5.06 Total: -5.51 kcal Total LS contribution 6.12 Total: 6.12 kcal Total: -8.69 -11.00 -19.69 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17761044_4549616.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -24.307 kcal (2) G-P(sol) polarization free energy of solvation -8.686 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -32.993 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.003 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.689 kcal (6) G-S(sol) free energy of system = (1) + (5) -43.996 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds