Wall clock time and date at job start Sun Mar 7 2021 08:04:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17395 * 1 3 3 C 1.47207 * 179.97438 * 2 1 4 4 H 1.08996 * 109.47343 * 297.05391 * 3 2 1 5 5 C 1.52994 * 109.46904 * 57.05835 * 3 2 1 6 6 C 1.53006 * 109.47341 * 60.00147 * 5 3 2 7 7 C 1.52994 * 109.47379 * 59.99493 * 6 5 3 8 8 H 1.09006 * 109.47258 * 60.00227 * 7 6 5 9 9 N 1.46498 * 109.47246 * 180.02562 * 7 6 5 10 10 C 1.34776 * 119.99799 * 275.00327 * 9 7 6 11 11 O 1.21278 * 120.00070 * 359.97438 * 10 9 7 12 12 C 1.50702 * 119.99904 * 180.02562 * 10 9 7 13 13 O 1.42901 * 109.47391 * 179.97438 * 12 10 9 14 14 C 1.35987 * 117.00195 * 180.02562 * 13 12 10 15 15 C 1.39158 * 120.07341 * 180.02562 * 14 13 12 16 16 O 1.35990 * 120.07151 * 359.95406 * 15 14 13 17 17 C 1.42897 * 117.00217 * 179.97438 * 16 15 14 18 18 C 1.38566 * 119.85372 * 179.97438 * 15 14 13 19 19 C 1.38234 * 119.99993 * 0.02562 * 18 15 14 20 20 C 1.50705 * 119.92888 * 179.97438 * 19 18 15 21 21 O 1.42893 * 109.47157 * 255.00290 * 20 19 18 22 22 Si 1.86306 * 109.46560 * 14.99902 * 20 19 18 23 23 C 1.38256 * 120.14940 * 359.97438 * 19 18 15 24 24 N 1.48007 * 119.92755 * 180.27584 * 23 19 18 25 25 O 1.21795 * 119.99836 * 179.72219 * 24 23 19 26 26 O 1.21795 * 119.99701 * 359.72821 * 24 23 19 27 27 C 1.38245 * 120.14249 * 0.02562 * 23 19 18 28 28 C 1.53002 * 109.47241 * 300.00299 * 7 6 5 29 29 C 1.52998 * 109.46954 * 60.00129 * 28 7 6 30 30 H 4.18737 * 15.03940 * 359.97438 * 4 2 1 31 31 H 1.09004 * 109.47012 * 179.97438 * 5 3 2 32 32 H 1.09000 * 109.47687 * 299.99630 * 5 3 2 33 33 H 1.09006 * 109.46740 * 299.99403 * 6 5 3 34 34 H 1.09006 * 109.47094 * 180.02562 * 6 5 3 35 35 H 0.97000 * 120.00391 * 94.99903 * 9 7 6 36 36 H 1.08999 * 109.47436 * 59.99665 * 12 10 9 37 37 H 1.08996 * 109.46974 * 299.99641 * 12 10 9 38 38 H 1.09004 * 109.47287 * 300.00173 * 17 16 15 39 39 H 1.09004 * 109.47118 * 59.99887 * 17 16 15 40 40 H 1.09000 * 109.47345 * 179.97438 * 17 16 15 41 41 H 1.07998 * 119.99870 * 180.02562 * 18 15 14 42 42 H 1.08998 * 109.47246 * 134.99954 * 20 19 18 43 43 H 0.96702 * 114.00512 * 59.99487 * 21 20 19 44 44 H 1.48491 * 110.00243 * 58.68493 * 22 20 19 45 45 H 1.48506 * 109.99492 * 179.97438 * 22 20 19 46 46 H 1.08000 * 119.99338 * 180.02562 * 27 23 19 47 47 H 1.08998 * 109.47211 * 179.97438 * 28 7 6 48 48 H 1.09001 * 109.47260 * 299.99802 * 28 7 6 49 49 H 1.08993 * 109.47474 * 60.00074 * 29 28 7 50 50 H 1.09002 * 109.46950 * 180.02562 * 29 28 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1739 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 1 3.0096 -0.4666 0.9152 5 6 3.1563 -0.7835 -1.2105 6 6 2.6460 -0.1275 -2.4952 7 6 3.1553 1.3133 -2.5693 8 1 4.2453 1.3138 -2.5693 9 7 2.6662 1.9415 -3.7990 10 6 3.3426 1.7797 -4.9534 11 8 4.3564 1.1144 -4.9741 12 6 2.8398 2.4264 -6.2184 13 8 3.7215 2.1108 -7.2978 14 6 3.4096 2.6210 -8.5191 15 6 4.2240 2.3535 -9.6153 16 8 5.3340 1.5819 -9.4673 17 6 6.1226 1.3488 -10.6360 18 6 3.9016 2.8753 -10.8578 19 6 2.7734 3.6601 -11.0063 20 6 2.4246 4.2273 -12.3583 21 8 2.7366 5.6215 -12.3849 22 14 3.4067 3.3459 -13.6734 23 6 1.9642 3.9260 -9.9172 24 7 0.7541 4.7619 -10.0830 25 8 0.0376 4.9927 -9.1256 26 8 0.4748 5.2188 -11.1769 27 6 2.2802 3.4085 -8.6749 28 6 2.6449 2.0975 -1.3587 29 6 3.1553 1.4416 -0.0741 30 1 -1.0500 0.0002 0.0007 31 1 4.2463 -0.7826 -1.2108 32 1 2.7935 -1.8100 -1.1579 33 1 1.5560 -0.1281 -2.4952 34 1 3.0092 -0.6865 -3.3577 35 1 1.8555 2.4739 -3.7825 36 1 2.8031 3.5075 -6.0840 37 1 1.8406 2.0543 -6.4443 38 1 5.5156 0.8471 -11.3898 39 1 6.4780 2.3008 -11.0304 40 1 6.9758 0.7209 -10.3793 41 1 4.5318 2.6688 -11.7102 42 1 1.3598 4.0896 -12.5464 43 1 3.6696 5.8189 -12.2247 44 1 3.1151 1.8904 -13.6353 45 1 3.0713 3.8957 -15.0116 46 1 1.6461 3.6174 -7.8259 47 1 3.0081 3.1238 -1.4112 48 1 1.5549 2.0970 -1.3587 49 1 4.2452 1.4421 -0.0741 50 1 2.7913 2.0000 0.7883 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17761044_4549636.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:04:49 Heat of formation + Delta-G solvation = -48.532936 kcal Electronic energy + Delta-G solvation = -36643.544270 eV Core-core repulsion = 31608.876574 eV Total energy + Delta-G solvation = -5034.667696 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 391.160 amu Computer time = 1.39 seconds Orbital eigenvalues (eV) -43.24120 -42.12502 -41.30624 -40.15897 -39.38035 -39.08705 -37.56362 -37.07878 -35.82000 -33.31926 -32.70655 -32.56794 -31.95806 -31.03641 -29.34774 -28.84555 -27.86527 -25.84013 -24.38424 -23.86278 -23.65733 -23.15540 -21.78181 -21.64734 -20.71583 -19.70940 -19.57660 -18.82970 -18.57234 -18.45982 -18.19645 -17.81478 -17.62340 -17.53644 -17.16014 -17.00636 -16.50483 -16.40683 -16.13283 -15.79140 -15.71025 -15.45188 -15.27348 -15.12324 -14.86919 -14.42541 -14.18812 -14.04957 -13.93808 -13.76226 -13.52927 -13.33704 -13.14924 -12.99676 -12.73321 -12.58226 -12.52209 -12.40418 -12.30296 -12.28160 -12.20467 -11.94693 -11.84499 -11.67367 -11.59030 -11.10267 -11.01018 -10.84667 -10.58565 -10.53293 -10.19652 -9.53636 -5.27815 -1.22865 -0.51346 0.31734 0.42971 1.02649 1.14597 1.39839 1.43939 1.71063 1.82393 1.86311 1.90682 1.93459 2.24512 2.90163 3.07779 3.20083 3.30718 3.33256 3.40524 3.45267 3.60572 3.64142 3.67112 3.71931 3.79678 3.85154 3.88728 3.93966 3.97452 4.00756 4.09832 4.15985 4.24448 4.33426 4.37108 4.37913 4.40659 4.52059 4.54080 4.66583 4.73029 4.91195 4.92192 4.99456 5.04794 5.08165 5.18999 5.26268 5.34767 5.45329 5.47356 5.91955 6.26693 6.43788 6.70794 6.78104 7.01160 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.175 4.175 3 C 0.016 3.984 4 H 0.096 0.904 5 C -0.109 4.109 6 C -0.131 4.131 7 C 0.149 3.851 8 H 0.093 0.907 9 N -0.723 5.723 10 C 0.519 3.481 11 O -0.508 6.508 12 C 0.031 3.969 13 O -0.264 6.264 14 C 0.110 3.890 15 C 0.170 3.830 16 O -0.284 6.284 17 C 0.013 3.987 18 C -0.177 4.177 19 C -0.043 4.043 20 C -0.074 4.074 21 O -0.515 6.515 22 Si 0.675 3.325 23 C -0.025 4.025 24 N 0.032 4.968 25 O -0.174 6.174 26 O -0.130 6.130 27 C -0.118 4.118 28 C -0.128 4.128 29 C -0.107 4.107 30 H 0.215 0.785 31 H 0.077 0.923 32 H 0.071 0.929 33 H 0.067 0.933 34 H 0.070 0.930 35 H 0.402 0.598 36 H 0.100 0.900 37 H 0.099 0.901 38 H 0.064 0.936 39 H 0.068 0.932 40 H 0.114 0.886 41 H 0.163 0.837 42 H 0.139 0.861 43 H 0.374 0.626 44 H -0.252 1.252 45 H -0.242 1.242 46 H 0.166 0.834 47 H 0.073 0.927 48 H 0.072 0.928 49 H 0.078 0.922 50 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.035 -1.124 1.746 4.538 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.228 4.228 2 C -0.175 4.175 3 C -0.002 4.002 4 H 0.114 0.886 5 C -0.147 4.147 6 C -0.170 4.170 7 C 0.045 3.955 8 H 0.111 0.889 9 N -0.376 5.376 10 C 0.303 3.697 11 O -0.381 6.381 12 C -0.048 4.048 13 O -0.176 6.176 14 C 0.062 3.938 15 C 0.122 3.878 16 O -0.195 6.195 17 C -0.082 4.082 18 C -0.196 4.196 19 C -0.045 4.045 20 C -0.184 4.184 21 O -0.319 6.319 22 Si 0.575 3.425 23 C -0.109 4.109 24 N 0.551 4.449 25 O -0.384 6.384 26 O -0.350 6.350 27 C -0.138 4.138 28 C -0.166 4.166 29 C -0.145 4.145 30 H 0.232 0.768 31 H 0.096 0.904 32 H 0.090 0.910 33 H 0.086 0.914 34 H 0.089 0.911 35 H 0.237 0.763 36 H 0.118 0.882 37 H 0.117 0.883 38 H 0.083 0.917 39 H 0.086 0.914 40 H 0.132 0.868 41 H 0.180 0.820 42 H 0.156 0.844 43 H 0.220 0.780 44 H -0.177 1.177 45 H -0.166 1.166 46 H 0.183 0.817 47 H 0.091 0.909 48 H 0.091 0.909 49 H 0.097 0.903 50 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges 4.964 -2.701 1.226 5.783 hybrid contribution -1.813 0.629 0.212 1.930 sum 3.152 -2.072 1.438 4.037 Atomic orbital electron populations 1.24933 0.95955 1.00689 1.01201 1.22900 0.94138 1.00412 1.00068 1.18430 0.84938 0.96990 0.99838 0.88615 1.21527 1.01252 0.99164 0.92722 1.21947 1.01400 0.95303 0.98335 1.21055 1.00165 0.92124 0.82155 0.88933 1.45899 1.29397 1.54184 1.08119 1.19823 0.84389 0.81342 0.84152 1.90800 1.23752 1.38353 1.85222 1.22677 0.94478 1.01806 0.85832 1.86334 1.48728 1.69213 1.13318 1.17854 0.93384 0.97178 0.85370 1.18448 0.87346 0.91121 0.90883 1.86344 1.33389 1.63516 1.36288 1.23419 0.95333 1.02541 0.86878 1.20896 0.99213 1.02777 0.96669 1.20097 0.92743 0.95434 0.96244 1.25472 1.07924 0.88174 0.96847 1.86709 1.31143 1.19843 1.94197 0.95579 0.88861 0.79063 0.79043 1.20400 0.91072 1.03748 0.95685 1.43380 1.01356 0.99542 1.00622 1.94541 1.47966 1.63755 1.32173 1.94573 1.76660 1.51234 1.12510 1.20805 0.97236 0.97995 0.97778 1.21833 1.01810 0.99379 0.93585 1.21509 1.01294 0.94195 0.97520 0.76799 0.90414 0.90985 0.91396 0.91128 0.76315 0.88234 0.88318 0.91745 0.91365 0.86777 0.82021 0.84405 0.77972 1.17656 1.16599 0.81650 0.90858 0.90945 0.90329 0.90709 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.21 0.00 19.25 29.55 0.57 0.56 16 2 C -0.18 -0.05 10.06 -37.12 -0.37 -0.42 16 3 C 0.02 -0.02 3.07 -93.40 -0.29 -0.31 16 4 H 0.10 -0.20 8.14 -51.93 -0.42 -0.62 16 5 C -0.11 0.12 5.43 -26.73 -0.15 -0.02 16 6 C -0.13 0.05 5.27 -26.73 -0.14 -0.09 16 7 C 0.15 -0.16 2.45 -67.93 -0.17 -0.32 16 8 H 0.09 0.05 7.58 -51.93 -0.39 -0.34 16 9 N -0.72 1.32 5.08 -53.81 -0.27 1.04 16 10 C 0.52 0.40 7.87 -10.98 -0.09 0.31 16 11 O -0.51 -2.77 16.16 -14.35 -0.23 -3.01 16 12 C 0.03 -0.05 5.22 36.01 0.19 0.14 16 13 O -0.26 -0.46 9.45 -47.33 -0.45 -0.91 16 14 C 0.11 0.07 6.70 -39.12 -0.26 -0.20 16 15 C 0.17 -0.01 6.70 -39.12 -0.26 -0.28 16 16 O -0.28 -0.06 10.28 -34.21 -0.35 -0.41 16 17 C 0.01 -0.05 9.81 101.05 0.99 0.94 16 18 C -0.18 0.33 7.65 -39.46 -0.30 0.03 16 19 C -0.04 0.00 5.26 -104.61 -0.55 -0.55 16 20 C -0.07 0.00 1.74 36.01 0.06 0.07 16 21 O -0.52 -0.21 11.81 -55.40 -0.65 -0.86 16 22 Si 0.67 -1.44 29.91 -169.99 -5.08 -6.53 16 23 C -0.03 -0.04 6.85 -79.94 -0.55 -0.59 16 24 N 0.03 0.14 4.45 33.96 0.15 0.29 16 25 O -0.17 -0.87 18.44 -29.46 -0.54 -1.41 16 26 O -0.13 -0.72 14.63 -35.94 -0.53 -1.24 16 27 C -0.12 -0.01 8.54 -39.46 -0.34 -0.35 16 28 C -0.13 0.30 5.17 -26.73 -0.14 0.16 16 29 C -0.11 0.25 5.43 -26.73 -0.15 0.10 16 30 H 0.22 -0.54 7.80 -54.09 -0.42 -0.96 16 31 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 32 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 33 H 0.07 0.00 7.23 -51.93 -0.38 -0.37 16 34 H 0.07 0.10 8.14 -51.93 -0.42 -0.32 16 35 H 0.40 -1.86 8.60 -40.82 -0.35 -2.21 16 36 H 0.10 -0.41 7.66 -51.93 -0.40 -0.81 16 37 H 0.10 -0.39 7.67 -51.93 -0.40 -0.79 16 38 H 0.06 -0.34 7.67 -51.93 -0.40 -0.74 16 39 H 0.07 -0.42 7.66 -51.93 -0.40 -0.82 16 40 H 0.11 -0.58 8.14 -51.93 -0.42 -1.01 16 41 H 0.16 -0.80 3.36 -52.49 -0.18 -0.98 16 42 H 0.14 0.23 6.06 -51.93 -0.31 -0.08 16 43 H 0.37 -1.56 8.70 45.56 0.40 -1.16 16 44 H -0.25 0.03 7.11 56.52 0.40 0.43 16 45 H -0.24 -0.29 7.11 56.52 0.40 0.11 16 46 H 0.17 -0.31 5.85 -52.49 -0.31 -0.61 16 47 H 0.07 -0.20 8.14 -51.93 -0.42 -0.63 16 48 H 0.07 -0.14 7.23 -51.93 -0.38 -0.52 16 49 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 50 H 0.07 -0.17 8.14 -51.93 -0.42 -0.60 16 LS Contribution 415.08 15.07 6.26 6.26 Total: 0.00 -12.18 415.08 -10.13 -22.31 By element: Atomic # 1 Polarization: -8.23 SS G_CDS: -6.49 Total: -14.72 kcal Atomic # 6 Polarization: 1.13 SS G_CDS: -1.93 Total: -0.81 kcal Atomic # 7 Polarization: 1.46 SS G_CDS: -0.12 Total: 1.33 kcal Atomic # 8 Polarization: -5.09 SS G_CDS: -2.75 Total: -7.84 kcal Atomic # 14 Polarization: -1.44 SS G_CDS: -5.08 Total: -6.53 kcal Total LS contribution 6.26 Total: 6.26 kcal Total: -12.18 -10.13 -22.31 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17761044_4549636.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -26.226 kcal (2) G-P(sol) polarization free energy of solvation -12.181 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -38.407 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.126 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.307 kcal (6) G-S(sol) free energy of system = (1) + (5) -48.533 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.40 seconds