Wall clock time and date at job start Sun Mar 7 2021 08:04:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17401 * 1 3 3 C 1.47200 * 179.97438 * 2 1 4 4 H 1.09005 * 109.46859 * 203.65895 * 3 2 1 5 5 C 1.53005 * 109.47136 * 323.65276 * 3 2 1 6 6 C 1.53000 * 109.46645 * 60.00403 * 5 3 2 7 7 C 1.53001 * 109.47470 * 59.99800 * 6 5 3 8 8 H 1.09007 * 109.46615 * 59.99766 * 7 6 5 9 9 N 1.46499 * 109.47277 * 179.97438 * 7 6 5 10 10 C 1.34784 * 119.99971 * 275.00026 * 9 7 6 11 11 O 1.21274 * 119.99897 * 359.72827 * 10 9 7 12 12 C 1.50695 * 119.99635 * 179.97438 * 10 9 7 13 13 O 1.42906 * 109.47045 * 180.02562 * 12 10 9 14 14 C 1.35892 * 117.00297 * 179.97438 * 13 12 10 15 15 C 1.38708 * 120.05798 * 179.97438 * 14 13 12 16 16 N 1.47999 * 120.02631 * 0.02562 * 15 14 13 17 17 O 1.21805 * 120.00020 * 179.97438 * 16 15 14 18 18 O 1.21803 * 120.00323 * 359.97438 * 16 15 14 19 19 C 1.38174 * 119.94478 * 179.97438 * 15 14 13 20 20 C 1.38238 * 120.05537 * 0.02595 * 19 15 14 21 21 C 1.50701 * 119.94198 * 180.02562 * 20 19 15 22 22 O 1.42900 * 109.46994 * 299.99537 * 21 20 19 23 23 Si 1.86302 * 109.46982 * 179.97438 * 21 20 19 24 24 C 1.38293 * 120.11270 * 359.97422 * 20 19 15 25 25 C 1.38121 * 120.05391 * 359.74989 * 24 20 19 26 26 C 1.52990 * 109.47084 * 300.00012 * 7 6 5 27 27 C 1.52997 * 109.47602 * 59.99809 * 26 7 6 28 28 H 4.18746 * 15.03883 * 0.02562 * 4 2 1 29 29 H 1.09005 * 109.46981 * 179.97438 * 5 3 2 30 30 H 1.08998 * 109.47256 * 300.00246 * 5 3 2 31 31 H 1.08995 * 109.47419 * 299.99611 * 6 5 3 32 32 H 1.09005 * 109.46641 * 179.97438 * 6 5 3 33 33 H 0.96999 * 119.99984 * 94.99874 * 9 7 6 34 34 H 1.09005 * 109.47403 * 300.00056 * 12 10 9 35 35 H 1.09002 * 109.47422 * 60.00295 * 12 10 9 36 36 H 1.08003 * 119.96882 * 180.02562 * 19 15 14 37 37 H 1.08996 * 109.47513 * 59.99877 * 21 20 19 38 38 H 0.96698 * 114.00450 * 300.00414 * 22 21 20 39 39 H 1.48498 * 110.00114 * 179.97438 * 23 21 20 40 40 H 1.48505 * 110.00017 * 301.31674 * 23 21 20 41 41 H 1.07996 * 119.97293 * 180.02562 * 24 20 19 42 42 H 1.07997 * 120.02701 * 180.26910 * 25 24 20 43 43 H 1.08997 * 109.47512 * 179.97438 * 26 7 6 44 44 H 1.09000 * 109.47240 * 299.99801 * 26 7 6 45 45 H 1.09007 * 109.47181 * 59.99582 * 27 26 7 46 46 H 1.09000 * 109.47850 * 180.02562 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 1 3.0089 0.9422 0.4124 5 6 3.1565 -1.1610 0.8550 6 6 2.6472 -2.4825 0.2761 7 6 3.1572 -2.6417 -1.1576 8 1 4.2473 -2.6411 -1.1575 9 7 2.6700 -3.9073 -1.7116 10 6 3.3478 -5.0493 -1.4810 11 8 4.3637 -5.0282 -0.8191 12 6 2.8462 -6.3512 -2.0505 13 8 3.7286 -7.4089 -1.6700 14 6 3.4175 -8.6584 -2.1045 15 6 4.2308 -9.7319 -1.7727 16 7 5.4384 -9.5179 -0.9443 17 8 6.1520 -10.4610 -0.6528 18 8 5.7187 -8.3986 -0.5539 19 6 3.9120 -11.0014 -2.2153 20 6 2.7839 -11.2020 -2.9887 21 6 2.4383 -12.5878 -3.4695 22 8 3.5047 -13.0918 -4.2762 23 14 0.8733 -12.5227 -4.4782 24 6 1.9714 -10.1334 -3.3209 25 6 2.2826 -8.8633 -2.8761 26 6 2.6468 -1.4801 -2.0124 27 6 3.1561 -0.1585 -1.4337 28 1 -1.0500 -0.0011 0.0000 29 1 4.2466 -1.1608 0.8546 30 1 2.7931 -1.0476 1.8763 31 1 1.5572 -2.4830 0.2761 32 1 3.0113 -3.3101 0.8849 33 1 1.8595 -3.9235 -2.2443 34 1 1.8472 -6.5555 -1.6651 35 1 2.8091 -6.2820 -3.1377 36 1 4.5447 -11.8376 -1.9568 37 1 2.2902 -13.2437 -2.6117 38 1 3.6925 -12.5566 -5.0593 39 1 0.5219 -13.8831 -4.9589 40 1 -0.2360 -11.9705 -3.6597 41 1 1.0904 -10.2927 -3.9248 42 1 1.6454 -8.0298 -3.1322 43 1 3.0105 -1.5931 -3.0337 44 1 1.5568 -1.4805 -2.0124 45 1 4.2461 -0.1580 -1.4336 46 1 2.7920 0.6691 -2.0424 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17761044_4549638.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:04:53 Heat of formation + Delta-G solvation = -19.886823 kcal Electronic energy + Delta-G solvation = -31837.553512 eV Core-core repulsion = 27278.347816 eV Total energy + Delta-G solvation = -4559.205697 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 361.145 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -43.02017 -41.79521 -41.10442 -39.95947 -39.14704 -37.54278 -37.12171 -35.80506 -33.57057 -33.24205 -32.39127 -31.94954 -31.10457 -29.24277 -27.59673 -26.71459 -24.55215 -23.86533 -23.68291 -22.80209 -21.77383 -21.62542 -20.47103 -19.44871 -19.25548 -18.74689 -18.34909 -18.29298 -18.07594 -17.64969 -17.40893 -17.15665 -16.55785 -16.40542 -16.25514 -15.84556 -15.74951 -15.46720 -15.32261 -15.14531 -14.91178 -14.25484 -14.09934 -14.03905 -13.92832 -13.72153 -13.32991 -13.29991 -12.98507 -12.57434 -12.42249 -12.40151 -12.29561 -12.19672 -12.12706 -11.84903 -11.83669 -11.73210 -11.58307 -11.08784 -11.01090 -10.94011 -10.82956 -10.77366 -10.17874 -9.90884 -5.31367 -1.13501 -0.38657 0.37913 0.53298 1.00078 1.08537 1.35258 1.42349 1.74527 1.89629 1.92324 1.93008 2.19905 2.97924 3.01718 3.19615 3.24256 3.30709 3.38084 3.51385 3.56276 3.59323 3.64277 3.68898 3.70753 3.89077 4.01583 4.10804 4.13958 4.15082 4.29822 4.34059 4.37866 4.41963 4.42542 4.52474 4.66955 4.74167 4.91563 4.91913 4.92449 4.99698 5.05595 5.09577 5.20322 5.26824 5.35964 5.45309 5.70574 6.27053 6.32184 6.69607 6.93903 7.04401 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.213 4.213 2 C -0.173 4.173 3 C 0.016 3.984 4 H 0.096 0.904 5 C -0.109 4.109 6 C -0.131 4.131 7 C 0.149 3.851 8 H 0.094 0.906 9 N -0.724 5.724 10 C 0.514 3.486 11 O -0.495 6.495 12 C 0.030 3.970 13 O -0.253 6.253 14 C 0.200 3.800 15 C -0.076 4.076 16 N 0.028 4.972 17 O -0.177 6.177 18 O -0.118 6.118 19 C 0.009 3.991 20 C -0.158 4.158 21 C -0.066 4.066 22 O -0.536 6.536 23 Si 0.692 3.308 24 C -0.025 4.025 25 C -0.209 4.209 26 C -0.127 4.127 27 C -0.107 4.107 28 H 0.215 0.785 29 H 0.078 0.922 30 H 0.071 0.929 31 H 0.066 0.934 32 H 0.071 0.929 33 H 0.400 0.600 34 H 0.101 0.899 35 H 0.102 0.898 36 H 0.164 0.836 37 H 0.121 0.879 38 H 0.381 0.619 39 H -0.248 1.248 40 H -0.254 1.254 41 H 0.149 0.851 42 H 0.156 0.844 43 H 0.072 0.928 44 H 0.071 0.929 45 H 0.079 0.921 46 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.273 3.764 -7.214 11.604 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.230 4.230 2 C -0.173 4.173 3 C -0.002 4.002 4 H 0.114 0.886 5 C -0.147 4.147 6 C -0.170 4.170 7 C 0.045 3.955 8 H 0.112 0.888 9 N -0.378 5.378 10 C 0.297 3.703 11 O -0.367 6.367 12 C -0.048 4.048 13 O -0.162 6.162 14 C 0.150 3.850 15 C -0.160 4.160 16 N 0.548 4.452 17 O -0.386 6.386 18 O -0.342 6.342 19 C -0.010 4.010 20 C -0.159 4.159 21 C -0.176 4.176 22 O -0.341 6.341 23 Si 0.593 3.407 24 C -0.043 4.043 25 C -0.229 4.229 26 C -0.165 4.165 27 C -0.145 4.145 28 H 0.232 0.768 29 H 0.097 0.903 30 H 0.090 0.910 31 H 0.085 0.915 32 H 0.090 0.910 33 H 0.234 0.766 34 H 0.118 0.882 35 H 0.120 0.880 36 H 0.182 0.818 37 H 0.138 0.862 38 H 0.229 0.771 39 H -0.173 1.173 40 H -0.179 1.179 41 H 0.166 0.834 42 H 0.174 0.826 43 H 0.091 0.909 44 H 0.090 0.910 45 H 0.097 0.903 46 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges -8.707 2.936 -6.611 11.320 hybrid contribution -0.393 0.035 0.449 0.597 sum -9.100 2.970 -6.163 11.385 Atomic orbital electron populations 1.24918 0.95937 1.01369 1.00781 1.22917 0.94147 0.99928 1.00321 1.18440 0.84895 1.00108 0.96803 0.88600 1.21531 1.01354 0.92818 0.99003 1.21945 1.01275 0.98071 0.95686 1.21054 1.00290 0.81353 0.92810 0.88844 1.45880 1.29395 1.06963 1.55540 1.19800 0.84670 0.84420 0.81386 1.90862 1.23154 1.85742 1.36933 1.22749 0.94326 0.86071 1.01681 1.86505 1.48437 1.12265 1.69016 1.18699 0.91556 0.84254 0.90466 1.20590 0.92364 0.94724 1.08342 1.43339 1.01212 1.00933 0.99675 1.94558 1.47894 1.34848 1.61264 1.94700 1.75943 1.09241 1.54281 1.20836 0.95254 0.94463 0.90411 1.20315 0.96346 0.97195 1.02086 1.25095 1.01189 0.91775 0.99542 1.86561 1.53886 1.53503 1.40138 0.94900 0.74923 0.84849 0.86001 1.21265 0.97426 0.91338 0.94244 1.21273 0.98020 0.99726 1.03838 1.21820 1.01686 0.93831 0.99167 1.21510 1.01368 0.97121 0.94541 0.76830 0.90325 0.90980 0.91489 0.91039 0.76553 0.88153 0.87998 0.81802 0.86167 0.77124 1.17279 1.17926 0.83423 0.82610 0.90912 0.91048 0.90273 0.90747 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.21 0.06 19.25 29.55 0.57 0.63 16 2 C -0.17 -0.01 10.06 -37.12 -0.37 -0.39 16 3 C 0.02 -0.02 3.07 -93.40 -0.29 -0.31 16 4 H 0.10 -0.20 8.14 -51.93 -0.42 -0.62 16 5 C -0.11 0.11 5.43 -26.73 -0.15 -0.03 16 6 C -0.13 0.05 5.27 -26.73 -0.14 -0.09 16 7 C 0.15 -0.18 2.46 -67.94 -0.17 -0.35 16 8 H 0.09 0.06 7.57 -51.93 -0.39 -0.33 16 9 N -0.72 1.71 5.08 -53.81 -0.27 1.44 16 10 C 0.51 0.27 7.87 -10.98 -0.09 0.19 16 11 O -0.49 -2.96 16.16 -14.35 -0.23 -3.19 16 12 C 0.03 -0.08 5.22 36.00 0.19 0.11 16 13 O -0.25 -0.54 7.68 -49.76 -0.38 -0.92 16 14 C 0.20 0.13 6.67 -39.22 -0.26 -0.13 16 15 C -0.08 -0.21 6.87 -79.81 -0.55 -0.76 16 16 N 0.03 0.19 4.45 34.03 0.15 0.34 16 17 O -0.18 -1.29 18.45 -29.46 -0.54 -1.83 16 18 O -0.12 -1.01 17.24 -36.49 -0.63 -1.64 16 19 C 0.01 0.00 9.11 -39.60 -0.36 -0.36 16 20 C -0.16 0.34 5.39 -104.60 -0.56 -0.23 16 21 C -0.07 0.17 2.82 36.01 0.10 0.27 16 22 O -0.54 0.89 12.77 -35.23 -0.45 0.44 16 23 Si 0.69 -2.65 29.79 -169.99 -5.06 -7.72 16 24 C -0.03 0.10 8.66 -39.60 -0.34 -0.25 16 25 C -0.21 0.71 9.04 -39.43 -0.36 0.35 16 26 C -0.13 0.34 5.17 -26.74 -0.14 0.20 16 27 C -0.11 0.26 5.43 -26.73 -0.15 0.12 16 28 H 0.21 -0.62 7.80 -54.09 -0.42 -1.05 16 29 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 30 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 31 H 0.07 -0.02 7.23 -51.93 -0.38 -0.39 16 32 H 0.07 0.11 8.14 -51.93 -0.42 -0.31 16 33 H 0.40 -2.25 8.60 -40.82 -0.35 -2.60 16 34 H 0.10 -0.56 7.65 -51.93 -0.40 -0.96 16 35 H 0.10 -0.60 7.68 -51.93 -0.40 -1.00 16 36 H 0.16 0.09 7.61 -52.48 -0.40 -0.30 16 37 H 0.12 -0.25 7.96 -51.93 -0.41 -0.67 16 38 H 0.38 -2.16 8.70 45.56 0.40 -1.76 16 39 H -0.25 0.01 7.11 56.52 0.40 0.41 16 40 H -0.25 0.51 7.11 56.52 0.40 0.91 16 41 H 0.15 -0.98 4.87 -52.49 -0.26 -1.24 16 42 H 0.16 -1.08 6.30 -52.49 -0.33 -1.41 16 43 H 0.07 -0.23 8.14 -51.93 -0.42 -0.66 16 44 H 0.07 -0.18 7.23 -51.93 -0.38 -0.55 16 45 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 46 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 LS Contribution 389.81 15.07 5.87 5.87 Total: 0.00 -12.55 389.81 -10.48 -23.03 By element: Atomic # 1 Polarization: -8.93 SS G_CDS: -5.87 Total: -14.80 kcal Atomic # 6 Polarization: 2.05 SS G_CDS: -3.06 Total: -1.01 kcal Atomic # 7 Polarization: 1.90 SS G_CDS: -0.12 Total: 1.78 kcal Atomic # 8 Polarization: -4.91 SS G_CDS: -2.24 Total: -7.15 kcal Atomic # 14 Polarization: -2.65 SS G_CDS: -5.06 Total: -7.72 kcal Total LS contribution 5.87 Total: 5.87 kcal Total: -12.55 -10.48 -23.03 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17761044_4549638.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 3.139 kcal (2) G-P(sol) polarization free energy of solvation -12.549 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -9.410 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.477 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.026 kcal (6) G-S(sol) free energy of system = (1) + (5) -19.887 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds