Wall clock time and date at job start Sun Mar 7 2021 08:05:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17405 * 1 3 3 C 1.47197 * 179.97438 * 2 1 4 4 H 1.08995 * 109.46908 * 206.52904 * 3 2 1 5 5 C 1.52999 * 109.46986 * 326.52619 * 3 2 1 6 6 C 1.52999 * 109.47246 * 60.00311 * 5 3 2 7 7 C 1.52998 * 109.47203 * 59.99536 * 6 5 3 8 8 H 1.09001 * 109.46890 * 60.00799 * 7 6 5 9 9 N 1.46508 * 109.46790 * 180.02562 * 7 6 5 10 10 C 1.34778 * 119.99466 * 205.00129 * 9 7 6 11 11 O 1.21284 * 120.00326 * 359.97438 * 10 9 7 12 12 C 1.50695 * 119.99615 * 179.97438 * 10 9 7 13 13 O 1.42904 * 109.47379 * 180.02562 * 12 10 9 14 14 C 1.35892 * 117.00431 * 180.02562 * 13 12 10 15 15 C 1.38707 * 120.05628 * 179.97438 * 14 13 12 16 16 C 1.38172 * 119.94473 * 180.02562 * 15 14 13 17 17 C 1.50700 * 119.97116 * 179.97438 * 16 15 14 18 18 O 1.42896 * 109.47341 * 300.00156 * 17 16 15 19 19 Si 1.86300 * 109.46849 * 180.02562 * 17 16 15 20 20 C 1.38239 * 120.05323 * 0.25963 * 16 15 14 21 21 C 1.38284 * 120.11328 * 359.48513 * 20 16 15 22 22 C 1.38122 * 120.05692 * 0.51187 * 21 20 16 23 23 C 1.52991 * 109.47253 * 299.99958 * 7 6 5 24 24 C 1.52999 * 109.47206 * 60.00224 * 23 7 6 25 25 H 4.18739 * 15.03923 * 359.97438 * 4 2 1 26 26 H 1.08996 * 109.47276 * 299.99795 * 5 3 2 27 27 H 1.09000 * 109.46553 * 180.02562 * 5 3 2 28 28 H 1.09008 * 109.46942 * 299.99600 * 6 5 3 29 29 H 1.09003 * 109.47083 * 180.02562 * 6 5 3 30 30 H 0.96993 * 120.00102 * 25.00381 * 9 7 6 31 31 H 1.09003 * 109.47443 * 60.00272 * 12 10 9 32 32 H 1.09003 * 109.47522 * 300.00130 * 12 10 9 33 33 H 1.08005 * 120.03037 * 0.04634 * 15 14 13 34 34 H 1.09000 * 109.46989 * 60.00486 * 17 16 15 35 35 H 0.96693 * 114.00306 * 299.99773 * 18 17 16 36 36 H 1.48506 * 110.00048 * 58.68772 * 19 17 16 37 37 H 1.48502 * 109.99996 * 180.02562 * 19 17 16 38 38 H 1.08004 * 119.94122 * 179.72243 * 20 16 15 39 39 H 1.08005 * 119.97459 * 180.23844 * 21 20 16 40 40 H 1.08000 * 120.03403 * 179.76655 * 22 21 20 41 41 H 1.09003 * 109.47497 * 179.97438 * 23 7 6 42 42 H 1.09001 * 109.47859 * 300.00247 * 23 7 6 43 43 H 1.08997 * 109.47433 * 180.02562 * 24 23 7 44 44 H 1.09005 * 109.47178 * 59.99320 * 24 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 1 3.0089 0.9202 0.4590 5 6 3.1565 -1.2024 0.7956 6 6 2.6472 -2.4932 0.1514 7 6 3.1572 -2.5804 -1.2885 8 1 4.2472 -2.5800 -1.2884 9 7 2.6689 -3.8162 -1.9055 10 6 3.3458 -4.3706 -2.9307 11 8 4.3588 -3.8462 -3.3427 12 6 2.8439 -5.6421 -3.5650 13 8 3.7259 -6.0280 -4.6210 14 6 3.4145 -7.1623 -5.3015 15 6 4.2268 -7.5952 -6.3391 16 6 3.9077 -8.7485 -7.0299 17 6 4.7896 -9.2190 -8.1577 18 8 4.8442 -8.2131 -9.1712 19 14 4.0915 -10.7887 -8.8784 20 6 2.7769 -9.4679 -6.6910 21 6 1.9683 -9.0414 -5.6536 22 6 2.2829 -7.8892 -4.9599 23 6 2.6466 -1.3775 -2.0840 24 6 3.1560 -0.0866 -1.4399 25 1 -1.0500 -0.0006 -0.0009 26 1 2.7932 -1.1403 1.8214 27 1 4.2465 -1.2016 0.7960 28 1 1.5571 -2.4938 0.1514 29 1 3.0105 -3.3503 0.7185 30 1 1.8585 -4.2353 -1.5763 31 1 1.8445 -5.4773 -3.9678 32 1 2.8076 -6.4325 -2.8152 33 1 5.1083 -7.0313 -6.6068 34 1 5.7940 -9.4080 -7.7789 35 1 3.9839 -7.9937 -9.5542 36 1 2.7103 -10.5516 -9.3699 37 1 4.9525 -11.2634 -9.9913 38 1 2.5268 -10.3668 -7.2351 39 1 1.0875 -9.6073 -5.3882 40 1 1.6490 -7.5543 -4.1522 41 1 3.0103 -1.4393 -3.1097 42 1 1.5566 -1.3779 -2.0841 43 1 2.7919 0.7705 -2.0064 44 1 4.2460 -0.0861 -1.4398 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17761044_4860298.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:05:04 Heat of formation + Delta-G solvation = -27.251142 kcal Electronic energy + Delta-G solvation = -25363.626703 eV Core-core repulsion = 21635.118101 eV Total energy + Delta-G solvation = -3728.508602 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 316.151 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -41.61276 -40.94766 -39.68557 -38.81219 -37.29852 -35.76738 -33.27767 -32.50316 -31.94046 -31.80128 -30.69147 -28.77861 -26.80239 -24.19909 -23.82404 -23.69169 -22.50468 -21.73979 -21.40022 -19.35734 -18.75642 -18.15361 -17.84569 -17.45270 -17.28584 -17.11592 -16.86559 -16.28858 -16.19499 -15.72758 -15.52807 -15.38272 -15.15789 -15.00412 -14.70915 -14.13361 -14.06575 -13.90793 -13.88457 -13.47234 -13.29860 -12.99388 -12.96588 -12.57803 -12.38964 -12.28497 -12.17865 -12.00233 -11.82228 -11.59769 -11.56336 -11.05182 -10.99758 -10.78359 -10.64526 -10.14578 -9.94584 -9.28339 -4.94980 0.18065 0.38730 1.25529 1.45535 1.49229 1.61041 1.90953 1.93764 1.97246 2.53742 2.64718 3.31730 3.37946 3.42729 3.61501 3.62963 3.67778 3.75846 3.86362 3.87537 3.90661 3.99738 4.02743 4.12161 4.17463 4.35045 4.36101 4.38839 4.43469 4.53560 4.54094 4.62509 4.75010 4.92974 4.93775 4.95273 5.00990 5.07050 5.10015 5.21080 5.22242 5.28577 5.33391 5.40381 5.42412 5.63217 6.23774 6.38321 6.41872 6.71019 7.09681 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.212 4.212 2 C -0.174 4.174 3 C 0.016 3.984 4 H 0.096 0.904 5 C -0.107 4.107 6 C -0.128 4.128 7 C 0.148 3.852 8 H 0.092 0.908 9 N -0.724 5.724 10 C 0.516 3.484 11 O -0.511 6.511 12 C 0.040 3.960 13 O -0.288 6.288 14 C 0.129 3.871 15 C -0.121 4.121 16 C -0.078 4.078 17 C -0.077 4.077 18 O -0.527 6.527 19 Si 0.690 3.310 20 C -0.154 4.154 21 C -0.073 4.073 22 C -0.206 4.206 23 C -0.131 4.131 24 C -0.109 4.109 25 H 0.215 0.785 26 H 0.074 0.926 27 H 0.078 0.922 28 H 0.071 0.929 29 H 0.072 0.928 30 H 0.401 0.599 31 H 0.094 0.906 32 H 0.095 0.905 33 H 0.136 0.864 34 H 0.121 0.879 35 H 0.376 0.624 36 H -0.260 1.260 37 H -0.257 1.257 38 H 0.130 0.870 39 H 0.131 0.869 40 H 0.130 0.870 41 H 0.070 0.930 42 H 0.067 0.933 43 H 0.071 0.929 44 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.901 -2.460 4.883 7.343 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.229 4.229 2 C -0.174 4.174 3 C -0.002 4.002 4 H 0.114 0.886 5 C -0.145 4.145 6 C -0.165 4.165 7 C 0.044 3.956 8 H 0.110 0.890 9 N -0.378 5.378 10 C 0.301 3.699 11 O -0.384 6.384 12 C -0.039 4.039 13 O -0.200 6.200 14 C 0.084 3.916 15 C -0.140 4.140 16 C -0.079 4.079 17 C -0.187 4.187 18 O -0.334 6.334 19 Si 0.591 3.409 20 C -0.171 4.171 21 C -0.091 4.091 22 C -0.225 4.225 23 C -0.170 4.170 24 C -0.147 4.147 25 H 0.232 0.768 26 H 0.093 0.907 27 H 0.097 0.903 28 H 0.090 0.910 29 H 0.091 0.909 30 H 0.235 0.765 31 H 0.112 0.888 32 H 0.113 0.887 33 H 0.154 0.846 34 H 0.139 0.861 35 H 0.224 0.776 36 H -0.185 1.185 37 H -0.182 1.182 38 H 0.147 0.853 39 H 0.149 0.851 40 H 0.147 0.853 41 H 0.089 0.911 42 H 0.086 0.914 43 H 0.090 0.910 44 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges -3.646 -2.365 3.967 5.884 hybrid contribution -1.409 0.822 -0.139 1.637 sum -5.055 -1.543 3.828 6.526 Atomic orbital electron populations 1.24926 0.95942 1.01224 1.00821 1.22910 0.94144 1.00044 1.00298 1.18433 0.84923 0.99754 0.97107 0.88614 1.21507 1.01319 0.92589 0.99112 1.21827 1.01734 0.98662 0.94326 1.21039 1.00170 0.82608 0.91736 0.88988 1.45905 1.29409 1.27232 1.35209 1.20024 0.84307 0.85304 0.80302 1.90787 1.23933 1.62701 1.61019 1.22474 0.94386 0.96270 0.90723 1.86174 1.49237 1.39279 1.45345 1.19045 0.94006 0.86068 0.92503 1.20278 1.01054 0.97482 0.95165 1.20103 0.95716 0.94903 0.97128 1.25109 1.04538 1.00384 0.88670 1.86617 1.35145 1.57483 1.54120 0.94929 0.78878 0.81450 0.85652 1.20943 0.95729 1.00664 0.99802 1.20904 0.98869 0.95114 0.94195 1.21302 0.98603 0.98569 1.04009 1.21942 1.01331 0.93794 0.99897 1.21530 1.01280 0.97877 0.94000 0.76806 0.90740 0.90324 0.91019 0.90900 0.76467 0.88846 0.88747 0.84592 0.86121 0.77604 1.18480 1.18200 0.85293 0.85086 0.85257 0.91123 0.91440 0.90994 0.90402 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.21 -0.01 19.25 29.55 0.57 0.56 16 2 C -0.17 -0.07 10.06 -37.12 -0.37 -0.45 16 3 C 0.02 -0.02 3.07 -93.41 -0.29 -0.30 16 4 H 0.10 -0.18 8.14 -51.93 -0.42 -0.60 16 5 C -0.11 0.22 5.43 -26.73 -0.15 0.08 16 6 C -0.13 0.27 5.17 -26.73 -0.14 0.13 16 7 C 0.15 -0.09 2.45 -67.93 -0.17 -0.25 16 8 H 0.09 0.11 7.58 -51.93 -0.39 -0.29 16 9 N -0.72 0.97 5.08 -53.81 -0.27 0.70 16 10 C 0.52 0.83 7.87 -10.99 -0.09 0.74 16 11 O -0.51 -3.33 16.16 -14.35 -0.23 -3.57 16 12 C 0.04 -0.03 5.22 36.00 0.19 0.16 16 13 O -0.29 -0.94 9.67 -39.31 -0.38 -1.32 16 14 C 0.13 0.27 6.69 -39.22 -0.26 0.01 16 15 C -0.12 -0.30 9.55 -39.43 -0.38 -0.68 16 16 C -0.08 -0.07 5.39 -104.65 -0.56 -0.63 16 17 C -0.08 -0.03 2.82 36.01 0.10 0.07 16 18 O -0.53 -1.06 12.77 -35.23 -0.45 -1.51 16 19 Si 0.69 -0.56 29.79 -169.99 -5.06 -5.62 16 20 C -0.15 0.05 8.67 -39.56 -0.34 -0.29 16 21 C -0.07 0.06 10.04 -39.61 -0.40 -0.34 16 22 C -0.21 0.05 9.04 -39.43 -0.36 -0.31 16 23 C -0.13 -0.01 5.27 -26.74 -0.14 -0.15 16 24 C -0.11 0.08 5.43 -26.73 -0.15 -0.06 16 25 H 0.22 -0.55 7.80 -54.09 -0.42 -0.97 16 26 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 27 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 28 H 0.07 -0.14 7.23 -51.92 -0.38 -0.51 16 29 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 30 H 0.40 -1.75 8.60 -40.82 -0.35 -2.10 16 31 H 0.09 -0.29 7.66 -51.93 -0.40 -0.68 16 32 H 0.09 -0.31 7.66 -51.93 -0.40 -0.71 16 33 H 0.14 0.43 8.06 -52.48 -0.42 0.01 16 34 H 0.12 -0.03 7.96 -51.93 -0.41 -0.44 16 35 H 0.38 -0.33 8.70 45.56 0.40 0.06 16 36 H -0.26 -0.27 7.11 56.52 0.40 0.14 16 37 H -0.26 -0.65 7.11 56.52 0.40 -0.25 16 38 H 0.13 -0.28 4.87 -52.48 -0.26 -0.54 16 39 H 0.13 -0.41 8.06 -52.48 -0.42 -0.84 16 40 H 0.13 -0.37 6.30 -52.49 -0.33 -0.70 16 41 H 0.07 0.14 8.14 -51.93 -0.42 -0.28 16 42 H 0.07 0.02 7.23 -51.93 -0.38 -0.35 16 43 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 44 H 0.08 -0.09 8.14 -51.93 -0.42 -0.52 16 LS Contribution 363.79 15.07 5.48 5.48 Total: 0.00 -9.25 363.79 -10.16 -19.41 By element: Atomic # 1 Polarization: -5.55 SS G_CDS: -6.32 Total: -11.87 kcal Atomic # 6 Polarization: 1.22 SS G_CDS: -2.92 Total: -1.71 kcal Atomic # 7 Polarization: 0.97 SS G_CDS: -0.27 Total: 0.70 kcal Atomic # 8 Polarization: -5.34 SS G_CDS: -1.06 Total: -6.40 kcal Atomic # 14 Polarization: -0.56 SS G_CDS: -5.06 Total: -5.62 kcal Total LS contribution 5.48 Total: 5.48 kcal Total: -9.25 -10.16 -19.41 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17761044_4860298.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -7.838 kcal (2) G-P(sol) polarization free energy of solvation -9.255 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -17.093 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.158 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.413 kcal (6) G-S(sol) free energy of system = (1) + (5) -27.251 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds