Wall clock time and date at job start Sun Mar 7 2021 08:05:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17410 * 1 3 3 C 1.47199 * 179.97438 * 2 1 4 4 H 1.08999 * 109.46882 * 61.30820 * 3 2 1 5 5 C 1.53000 * 109.46810 * 181.30868 * 3 2 1 6 6 C 1.52997 * 109.47565 * 60.00084 * 5 3 2 7 7 C 1.52991 * 109.47199 * 59.99677 * 6 5 3 8 8 H 1.09007 * 109.47090 * 60.00309 * 7 6 5 9 9 N 1.46503 * 109.47282 * 180.02562 * 7 6 5 10 10 C 1.34781 * 119.99663 * 275.00031 * 9 7 6 11 11 O 1.21696 * 120.00013 * 354.88019 * 10 9 7 12 12 C 1.46674 * 119.99713 * 174.87891 * 10 9 7 13 13 C 1.37880 * 126.22577 * 5.35432 * 12 10 9 14 14 C 1.39882 * 107.09191 * 179.97438 * 13 12 10 15 15 Br 1.89101 * 126.07286 * 180.02562 * 14 13 12 16 16 C 1.35497 * 107.85122 * 0.02562 * 14 13 12 17 17 C 1.50699 * 125.57203 * 179.97438 * 16 14 13 18 18 O 1.42904 * 109.47456 * 115.25595 * 17 16 14 19 19 Si 1.86300 * 109.47394 * 235.25670 * 17 16 14 20 20 N 1.35597 * 108.86094 * 0.23752 * 16 14 13 21 21 C 1.46501 * 125.67862 * 179.75818 * 20 16 14 22 22 C 1.53002 * 109.47307 * 300.00259 * 7 6 5 23 23 C 1.53000 * 109.47217 * 301.30748 * 3 2 1 24 24 H 4.18735 * 15.04069 * 0.02562 * 4 2 1 25 25 H 1.09000 * 109.47204 * 180.02562 * 5 3 2 26 26 H 1.09002 * 109.46819 * 299.99784 * 5 3 2 27 27 H 1.09007 * 109.46847 * 299.99838 * 6 5 3 28 28 H 1.08993 * 109.47502 * 180.02562 * 6 5 3 29 29 H 0.96994 * 120.00274 * 95.00066 * 9 7 6 30 30 H 1.08003 * 126.45619 * 0.02562 * 13 12 10 31 31 H 1.09003 * 109.47340 * 355.25806 * 17 16 14 32 32 H 0.96700 * 113.99727 * 60.00060 * 18 17 16 33 33 H 1.48500 * 109.99804 * 63.68091 * 19 17 16 34 34 H 1.48497 * 110.00333 * 185.00435 * 19 17 16 35 35 H 1.08995 * 109.47217 * 95.42795 * 21 20 16 36 36 H 1.09010 * 109.47000 * 215.42244 * 21 20 16 37 37 H 1.08999 * 109.47138 * 335.42070 * 21 20 16 38 38 H 1.09001 * 109.47524 * 179.97438 * 22 7 6 39 39 H 1.09000 * 109.47385 * 299.99824 * 22 7 6 40 40 H 1.09000 * 109.46927 * 180.02562 * 23 3 2 41 41 H 1.09002 * 109.47267 * 59.99805 * 23 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1741 0.0000 0.0000 3 6 2.6461 0.0007 0.0000 4 1 3.0096 -0.4926 -0.9015 5 6 3.1554 1.4430 0.0329 6 6 2.6451 2.1354 1.2983 7 6 3.1554 1.3861 2.5307 8 1 4.2454 1.3866 2.5307 9 7 2.6663 2.0487 3.7423 10 6 3.3422 3.0945 4.2580 11 8 4.4069 3.4297 3.7731 12 6 2.7946 3.8285 5.4038 13 6 1.6601 3.5000 6.1151 14 6 1.5093 4.4646 7.1169 15 35 0.1246 4.5269 8.4032 16 6 2.5317 5.3463 7.0019 17 6 2.7562 6.5481 7.8829 18 8 3.9706 6.3803 8.6173 19 14 2.8755 8.0785 6.8272 20 7 3.3167 4.9738 5.9608 21 6 4.5221 5.6719 5.5071 22 6 2.6461 -0.0563 2.4978 23 6 3.1564 -0.7487 1.2324 24 1 -1.0499 0.0002 -0.0007 25 1 4.2454 1.4436 0.0325 26 1 2.7918 1.9768 -0.8451 27 1 1.5550 2.1349 1.2983 28 1 3.0075 3.1630 1.3215 29 1 1.8561 1.7348 4.1734 30 1 1.0107 2.6563 5.9337 31 1 1.9226 6.6501 8.5777 32 1 4.7560 6.2831 8.0617 33 1 1.5876 8.3136 6.1263 34 1 3.2166 9.2521 7.6706 35 1 5.4008 5.2092 5.9563 36 1 4.5925 5.6071 4.4212 37 1 4.4699 6.7188 5.8059 38 1 3.0100 -0.5903 3.3756 39 1 1.5561 -0.0568 2.4979 40 1 4.2464 -0.7478 1.2326 41 1 2.7936 -1.7762 1.2090 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17761044_5000100.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:05:13 Heat of formation + Delta-G solvation = 36.846475 kcal Electronic energy + Delta-G solvation = -25115.150735 eV Core-core repulsion = 21431.086033 eV Total energy + Delta-G solvation = -3684.064702 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.057 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -42.91045 -40.94088 -39.35496 -37.90146 -35.90709 -34.48214 -33.27714 -32.21048 -31.81895 -31.07328 -30.12799 -27.37876 -26.97975 -24.18925 -23.70967 -22.88419 -21.76532 -21.50367 -20.55771 -19.07382 -18.27688 -18.00320 -17.41588 -17.14625 -16.86971 -16.36896 -16.11615 -15.67027 -15.53095 -15.32247 -15.13593 -14.67560 -14.41699 -14.34411 -14.24093 -13.98700 -13.77495 -13.67775 -13.24569 -13.20142 -12.93646 -12.87604 -12.40010 -12.27592 -12.17975 -11.94976 -11.74489 -11.48849 -11.36251 -11.12971 -10.92072 -10.85162 -10.81881 -10.15887 -9.82124 -9.31165 -5.22024 0.13323 0.59901 0.89457 1.15394 1.42009 1.52064 1.80939 1.95928 1.98692 2.15856 2.26256 3.17008 3.40593 3.44602 3.50207 3.68120 3.77994 3.80635 3.88735 4.03417 4.13584 4.23069 4.24609 4.31460 4.40041 4.47235 4.49621 4.52734 4.61683 4.65015 4.72593 4.88725 5.06161 5.07471 5.15082 5.17326 5.18534 5.22164 5.32958 5.39445 5.48235 5.54902 5.81566 6.40616 6.43374 6.77509 7.05061 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.225 4.225 2 C -0.191 4.191 3 C 0.015 3.985 4 H 0.104 0.896 5 C -0.106 4.106 6 C -0.124 4.124 7 C 0.153 3.847 8 H 0.084 0.916 9 N -0.704 5.704 10 C 0.594 3.406 11 O -0.566 6.566 12 C -0.042 4.042 13 C -0.109 4.109 14 C -0.181 4.181 15 Br -0.029 7.029 16 C 0.048 3.952 17 C -0.055 4.055 18 O -0.541 6.541 19 Si 0.747 3.253 20 N -0.393 5.393 21 C 0.056 3.944 22 C -0.122 4.122 23 C -0.105 4.105 24 H 0.231 0.769 25 H 0.086 0.914 26 H 0.067 0.933 27 H 0.061 0.939 28 H 0.053 0.947 29 H 0.413 0.587 30 H 0.174 0.826 31 H 0.125 0.875 32 H 0.390 0.610 33 H -0.283 1.283 34 H -0.264 1.264 35 H 0.110 0.890 36 H 0.108 0.892 37 H 0.109 0.891 38 H 0.080 0.920 39 H 0.069 0.931 40 H 0.088 0.912 41 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.018 -1.738 -3.546 4.434 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C -0.191 4.191 3 C -0.003 4.003 4 H 0.122 0.878 5 C -0.144 4.144 6 C -0.163 4.163 7 C 0.049 3.951 8 H 0.102 0.898 9 N -0.355 5.355 10 C 0.382 3.618 11 O -0.447 6.447 12 C -0.156 4.156 13 C -0.136 4.136 14 C -0.267 4.267 15 Br 0.055 6.945 16 C -0.073 4.073 17 C -0.164 4.164 18 O -0.347 6.347 19 Si 0.648 3.352 20 N -0.067 5.067 21 C -0.082 4.082 22 C -0.160 4.160 23 C -0.143 4.143 24 H 0.248 0.752 25 H 0.104 0.896 26 H 0.086 0.914 27 H 0.079 0.921 28 H 0.072 0.928 29 H 0.249 0.751 30 H 0.191 0.809 31 H 0.142 0.858 32 H 0.240 0.760 33 H -0.210 1.210 34 H -0.189 1.189 35 H 0.128 0.872 36 H 0.127 0.873 37 H 0.127 0.873 38 H 0.098 0.902 39 H 0.087 0.913 40 H 0.107 0.893 41 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges 1.907 -0.475 -3.233 3.784 hybrid contribution -1.061 -0.466 0.443 1.241 sum 0.846 -0.942 -2.791 3.064 Atomic orbital electron populations 1.25543 0.96840 1.00658 1.01081 1.23400 0.94946 1.00511 1.00260 1.18516 0.84146 0.97213 1.00427 0.87810 1.21504 1.01679 0.93843 0.97325 1.21860 1.00917 0.99025 0.94473 1.21024 0.99628 0.91896 0.82557 0.89781 1.45686 1.29357 1.31891 1.28548 1.16876 0.83558 0.80212 0.81199 1.90807 1.22536 1.68205 1.63130 1.20067 0.99326 0.94095 1.02153 1.21479 0.96877 1.00319 0.94904 1.20974 0.99890 1.02770 1.03018 1.96654 1.45648 1.98684 1.53489 1.20803 0.93722 0.99930 0.92858 1.24981 0.91138 1.01462 0.98856 1.86593 1.15979 1.95786 1.36389 0.94460 0.86184 0.73865 0.80704 1.43889 1.21293 1.19644 1.21857 1.22743 0.84380 0.96718 1.04399 1.21784 1.01576 0.93303 0.99356 1.21519 1.01887 0.99060 0.91850 0.75206 0.89582 0.91425 0.92067 0.92783 0.75076 0.80898 0.85767 0.76010 1.20950 1.18939 0.87219 0.87348 0.87318 0.90183 0.91258 0.89296 0.90493 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.22 -0.04 19.25 74.32 1.43 1.39 16 2 C -0.19 -0.11 10.06 31.12 0.31 0.20 16 3 C 0.01 -0.05 3.07 -12.60 -0.04 -0.09 16 4 H 0.10 -0.51 8.14 -2.39 -0.02 -0.53 16 5 C -0.11 0.30 5.43 30.59 0.17 0.46 16 6 C -0.12 0.10 5.27 30.59 0.16 0.26 16 7 C 0.15 -0.31 2.50 44.99 0.11 -0.20 16 8 H 0.08 0.05 7.51 -2.38 -0.02 0.03 16 9 N -0.70 1.30 5.06 -446.49 -2.26 -0.96 16 10 C 0.59 1.55 7.74 86.45 0.67 2.22 16 11 O -0.57 -4.10 14.51 -4.34 -0.06 -4.17 16 12 C -0.04 -0.08 6.88 40.35 0.28 0.20 16 13 C -0.11 -0.14 10.34 22.58 0.23 0.09 16 14 C -0.18 -0.75 6.53 22.03 0.14 -0.61 16 15 Br -0.03 -0.13 33.06 -20.37 -0.67 -0.81 16 16 C 0.05 0.11 5.30 41.34 0.22 0.33 16 17 C -0.05 -0.05 2.87 71.24 0.20 0.15 16 18 O -0.54 -0.21 12.88 -148.98 -1.92 -2.13 16 19 Si 0.75 -1.22 29.23 68.60 2.01 0.79 16 20 N -0.39 -0.05 3.10 -519.61 -1.61 -1.66 16 21 C 0.06 -0.35 8.82 127.77 1.13 0.78 16 22 C -0.12 0.57 5.17 30.60 0.16 0.73 16 23 C -0.11 0.55 5.43 30.60 0.17 0.72 16 24 H 0.23 -1.16 7.80 -4.42 -0.03 -1.20 16 25 H 0.09 -0.38 8.14 -2.39 -0.02 -0.40 16 26 H 0.07 -0.13 8.14 -2.39 -0.02 -0.15 16 27 H 0.06 0.04 7.23 -2.38 -0.02 0.03 16 28 H 0.05 0.13 8.14 -2.39 -0.02 0.11 16 29 H 0.41 -2.40 7.50 -92.71 -0.70 -3.10 16 30 H 0.17 -0.65 7.45 -2.91 -0.02 -0.67 16 31 H 0.13 0.39 6.96 -2.39 -0.02 0.37 16 32 H 0.39 -3.10 7.47 -74.06 -0.55 -3.65 16 33 H -0.28 -1.44 7.11 99.48 0.71 -0.73 16 34 H -0.26 -0.83 7.11 99.48 0.71 -0.13 16 35 H 0.11 -0.97 8.14 -2.39 -0.02 -0.99 16 36 H 0.11 -0.46 6.79 -2.38 -0.02 -0.47 16 37 H 0.11 -1.28 3.77 -2.39 -0.01 -1.28 16 38 H 0.08 -0.45 8.14 -2.39 -0.02 -0.47 16 39 H 0.07 -0.26 7.23 -2.39 -0.02 -0.27 16 40 H 0.09 -0.63 8.14 -2.39 -0.02 -0.65 16 41 H 0.08 -0.41 8.14 -2.39 -0.02 -0.43 16 Total: 0.00 -17.57 351.54 0.68 -16.88 By element: Atomic # 1 Polarization: -14.45 SS G_CDS: -0.14 Total: -14.59 kcal Atomic # 6 Polarization: 1.30 SS G_CDS: 5.34 Total: 6.64 kcal Atomic # 7 Polarization: 1.25 SS G_CDS: -3.87 Total: -2.62 kcal Atomic # 8 Polarization: -4.32 SS G_CDS: -1.98 Total: -6.30 kcal Atomic # 14 Polarization: -1.22 SS G_CDS: 2.01 Total: 0.79 kcal Atomic # 35 Polarization: -0.13 SS G_CDS: -0.67 Total: -0.81 kcal Total: -17.57 0.68 -16.88 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17761044_5000100.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 53.731 kcal (2) G-P(sol) polarization free energy of solvation -17.566 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 36.164 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.682 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.884 kcal (6) G-S(sol) free energy of system = (1) + (5) 36.846 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds