Wall clock time and date at job start Sun Mar 7 2021 08:05:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17396 * 1 3 3 C 1.47204 * 179.97438 * 2 1 4 4 H 1.09000 * 109.47165 * 276.11983 * 3 2 1 5 5 C 1.52996 * 109.47495 * 36.12894 * 3 2 1 6 6 C 1.52997 * 109.47081 * 59.99517 * 5 3 2 7 7 C 1.53002 * 109.47012 * 60.00272 * 6 5 3 8 8 H 1.08999 * 109.47125 * 60.00125 * 7 6 5 9 9 N 1.46505 * 109.47351 * 179.97438 * 7 6 5 10 10 C 1.34768 * 120.00072 * 205.00477 * 9 7 6 11 11 O 1.21273 * 120.00440 * 359.97438 * 10 9 7 12 12 C 1.50706 * 119.99753 * 179.97438 * 10 9 7 13 13 N 1.46906 * 109.46929 * 179.97438 * 12 10 9 14 14 C 1.46898 * 110.99888 * 66.04676 * 13 12 10 15 15 C 1.39678 * 110.99875 * 190.00362 * 13 12 10 16 16 C 1.38881 * 120.07821 * 119.99980 * 15 13 12 17 17 C 1.50705 * 120.03583 * 359.97438 * 16 15 13 18 18 O 1.42903 * 109.47191 * 284.99862 * 17 16 15 19 19 Si 1.86301 * 109.46974 * 165.00273 * 17 16 15 20 20 C 1.38124 * 119.92798 * 179.97438 * 16 15 13 21 21 C 1.38263 * 120.07194 * 0.02562 * 20 16 15 22 22 C 1.50698 * 119.92428 * 179.97438 * 21 20 16 23 23 F 1.39900 * 109.47300 * 89.99855 * 22 21 20 24 24 F 1.39905 * 109.47093 * 209.99783 * 22 21 20 25 25 F 1.39904 * 109.47241 * 330.00112 * 22 21 20 26 26 C 1.38311 * 120.15012 * 359.97438 * 21 20 16 27 27 C 1.38077 * 120.07552 * 359.74568 * 26 21 20 28 28 C 1.52996 * 109.47343 * 299.99864 * 7 6 5 29 29 C 1.53000 * 109.46930 * 59.99727 * 28 7 6 30 30 H 4.18744 * 15.03890 * 359.97438 * 4 2 1 31 31 H 1.09004 * 109.46855 * 300.00046 * 5 3 2 32 32 H 1.08999 * 109.47465 * 179.97438 * 5 3 2 33 33 H 1.08996 * 109.47797 * 300.00372 * 6 5 3 34 34 H 1.09006 * 109.46990 * 180.02562 * 6 5 3 35 35 H 0.97005 * 119.99404 * 24.99452 * 9 7 6 36 36 H 1.08998 * 109.46946 * 59.99907 * 12 10 9 37 37 H 1.09000 * 109.47319 * 299.99706 * 12 10 9 38 38 H 1.08997 * 109.47334 * 60.00212 * 14 13 12 39 39 H 1.09000 * 109.46674 * 180.02562 * 14 13 12 40 40 H 1.08995 * 109.47296 * 299.99911 * 14 13 12 41 41 H 1.08994 * 109.47387 * 45.00277 * 17 16 15 42 42 H 0.96696 * 113.99415 * 59.99806 * 18 17 16 43 43 H 1.48498 * 110.00311 * 178.68250 * 19 17 16 44 44 H 1.48502 * 109.99930 * 299.99983 * 19 17 16 45 45 H 1.07997 * 119.96778 * 180.02562 * 20 16 15 46 46 H 1.07997 * 119.96077 * 180.02562 * 26 21 20 47 47 H 1.07995 * 120.03979 * 180.26826 * 27 26 21 48 48 H 1.08995 * 109.47419 * 179.97438 * 28 7 6 49 49 H 1.09002 * 109.46777 * 299.99957 * 28 7 6 50 50 H 1.09006 * 109.46965 * 180.02562 * 29 28 7 51 51 H 1.09002 * 109.47203 * 60.00491 * 29 28 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 1 3.0094 -0.1087 1.0218 5 6 3.1566 -1.1642 -0.8505 6 6 2.6465 -1.0105 -2.2847 7 6 3.1558 0.3089 -2.8685 8 1 4.2458 0.3094 -2.8685 9 7 2.6679 0.4559 -4.2420 10 6 3.3445 1.2236 -5.1190 11 8 4.3571 1.7932 -4.7711 12 6 2.8429 1.3742 -6.5321 13 7 3.7487 2.2548 -7.2820 14 6 5.0705 1.6348 -7.4446 15 6 3.2012 2.5986 -8.5202 16 6 2.9634 3.9313 -8.8302 17 6 3.2952 5.0091 -7.8305 18 8 2.3166 5.0106 -6.7891 19 14 3.2984 6.6661 -8.6820 20 6 2.4224 4.2678 -10.0557 21 6 2.1172 3.2795 -10.9732 22 6 1.5265 3.6504 -12.3091 23 9 2.5565 3.8632 -13.2315 24 9 0.7041 2.6122 -12.7597 25 9 0.7705 4.8201 -12.1762 26 6 2.3527 1.9513 -10.6677 27 6 2.8987 1.6084 -9.4467 28 6 2.6453 1.4738 -2.0181 29 6 3.1553 1.3200 -0.5838 30 1 -1.0500 0.0005 0.0002 31 1 2.7937 -2.1041 -0.4346 32 1 4.2466 -1.1634 -0.8508 33 1 1.5565 -1.0110 -2.2848 34 1 3.0099 -1.8406 -2.8905 35 1 1.8579 0.0004 -4.5203 36 1 1.8433 1.8086 -6.5184 37 1 2.8074 0.3959 -7.0113 38 1 4.9669 0.6956 -7.9879 39 1 5.7212 2.3080 -8.0026 40 1 5.5041 1.4411 -6.4636 41 1 4.2797 4.8182 -7.4036 42 1 2.2595 4.1773 -6.3019 43 1 3.5930 7.7410 -7.7006 44 1 4.3119 6.6776 -9.7673 45 1 2.2376 5.3040 -10.2976 46 1 2.1136 1.1818 -11.3868 47 1 3.0864 0.5714 -9.2105 48 1 3.0085 2.4136 -2.4337 49 1 1.5553 1.4732 -2.0181 50 1 2.7912 2.1497 0.0222 51 1 4.2454 1.3206 -0.5838 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17761044_6406254.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:05:22 Heat of formation + Delta-G solvation = -120.246147 kcal Electronic energy + Delta-G solvation = -38150.364424 eV Core-core repulsion = 32796.104754 eV Total energy + Delta-G solvation = -5354.259671 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 397.165 amu Computer time = 1.45 seconds Orbital eigenvalues (eV) -51.18973 -48.70056 -48.66477 -41.83550 -40.97191 -39.59406 -37.66299 -37.62541 -35.69154 -33.21569 -33.00561 -32.14513 -31.83749 -30.77690 -28.88721 -27.60855 -26.99426 -25.18128 -24.03488 -23.72921 -23.21977 -22.06312 -21.65291 -21.27203 -19.55369 -19.50134 -19.44128 -18.60930 -18.26826 -18.11348 -17.71375 -17.21863 -16.88919 -16.57230 -16.34775 -16.13332 -15.89316 -15.58428 -15.53093 -15.44063 -15.36179 -15.22306 -15.10122 -15.06183 -14.85197 -14.80933 -14.74128 -14.57505 -14.26292 -14.16579 -13.87715 -13.78064 -13.59468 -13.23953 -13.20522 -13.02809 -12.88885 -12.81885 -12.57943 -12.28538 -12.23145 -12.20398 -11.74035 -11.50050 -11.46228 -11.22557 -11.02570 -10.93031 -10.75710 -10.23527 -10.10969 -10.05164 -9.67489 -4.98295 -0.37665 0.00596 1.29140 1.53776 1.59455 1.61144 1.90359 1.91333 1.94380 1.97309 2.17114 2.61834 2.72504 2.94524 3.36042 3.42919 3.48335 3.59133 3.66264 3.75253 3.79232 3.83235 4.00100 4.02180 4.03408 4.06923 4.11970 4.16955 4.22097 4.27551 4.32974 4.42335 4.45527 4.48402 4.49217 4.52059 4.61758 4.65075 4.85846 4.86390 4.96624 4.96782 5.04943 5.06278 5.11503 5.13869 5.15408 5.17122 5.30297 5.37373 5.39418 5.52354 5.56259 6.06013 6.54166 6.56000 6.75707 7.26911 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.221 4.221 2 C -0.193 4.193 3 C 0.016 3.984 4 H 0.101 0.899 5 C -0.107 4.107 6 C -0.119 4.119 7 C 0.153 3.847 8 H 0.073 0.927 9 N -0.716 5.716 10 C 0.515 3.485 11 O -0.560 6.560 12 C 0.037 3.963 13 N -0.506 5.506 14 C 0.026 3.974 15 C 0.129 3.871 16 C -0.100 4.100 17 C -0.066 4.066 18 O -0.541 6.541 19 Si 0.786 3.214 20 C -0.062 4.062 21 C -0.185 4.185 22 C 0.509 3.491 23 F -0.182 7.182 24 F -0.177 7.177 25 F -0.176 7.176 26 C -0.053 4.053 27 C -0.139 4.139 28 C -0.123 4.123 29 C -0.108 4.108 30 H 0.233 0.767 31 H 0.077 0.923 32 H 0.084 0.916 33 H 0.070 0.930 34 H 0.080 0.920 35 H 0.414 0.586 36 H 0.125 0.875 37 H 0.100 0.900 38 H 0.050 0.950 39 H 0.063 0.937 40 H 0.080 0.920 41 H 0.073 0.927 42 H 0.370 0.630 43 H -0.293 1.293 44 H -0.264 1.264 45 H 0.151 0.849 46 H 0.157 0.843 47 H 0.160 0.840 48 H 0.048 0.952 49 H 0.062 0.938 50 H 0.064 0.936 51 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.761 -7.167 0.961 7.741 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C -0.193 4.193 3 C -0.002 4.002 4 H 0.119 0.881 5 C -0.144 4.144 6 C -0.157 4.157 7 C 0.048 3.952 8 H 0.091 0.909 9 N -0.369 5.369 10 C 0.301 3.699 11 O -0.437 6.437 12 C -0.092 4.092 13 N -0.228 5.228 14 C -0.120 4.120 15 C 0.035 3.965 16 C -0.101 4.101 17 C -0.175 4.175 18 O -0.347 6.347 19 Si 0.689 3.311 20 C -0.080 4.080 21 C -0.186 4.186 22 C 0.455 3.545 23 F -0.163 7.163 24 F -0.158 7.158 25 F -0.158 7.158 26 C -0.071 4.071 27 C -0.158 4.158 28 C -0.161 4.161 29 C -0.146 4.146 30 H 0.250 0.750 31 H 0.096 0.904 32 H 0.103 0.897 33 H 0.089 0.911 34 H 0.099 0.901 35 H 0.250 0.750 36 H 0.143 0.857 37 H 0.118 0.882 38 H 0.068 0.932 39 H 0.082 0.918 40 H 0.099 0.901 41 H 0.091 0.909 42 H 0.219 0.781 43 H -0.221 1.221 44 H -0.189 1.189 45 H 0.168 0.832 46 H 0.175 0.825 47 H 0.177 0.823 48 H 0.067 0.933 49 H 0.081 0.919 50 H 0.083 0.917 51 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges -1.588 -5.036 1.049 5.383 hybrid contribution 0.149 -1.761 0.165 1.775 sum -1.439 -6.797 1.214 7.053 Atomic orbital electron populations 1.25552 0.96799 1.00295 1.01062 1.23342 0.94870 1.00798 1.00312 1.18480 0.84359 0.96212 1.01173 0.88101 1.21518 1.01657 0.97474 0.93791 1.21755 1.01567 0.95877 0.96527 1.20874 0.98976 0.95024 0.80280 0.90885 1.45962 1.29670 1.50142 1.11094 1.20711 0.83508 0.78034 0.87633 1.90711 1.26247 1.47117 1.79663 1.22198 0.97682 0.98592 0.90686 1.59163 1.03670 1.45113 1.14841 1.22562 0.88417 0.97804 1.03203 1.18865 0.95223 0.92524 0.89880 1.20173 1.00159 0.94650 0.95151 1.25307 0.93801 1.07777 0.90588 1.86692 1.58913 1.40688 1.48384 0.92640 0.87780 0.72226 0.78489 1.20814 0.95483 0.99549 0.92131 1.19981 1.08406 0.96609 0.93606 1.18333 0.76000 0.74607 0.85580 1.93236 1.59117 1.94764 1.69206 1.93202 1.73519 1.58419 1.90664 1.93211 1.77075 1.49503 1.95978 1.21106 0.94342 0.94290 0.97391 1.21869 0.99652 1.01010 0.93294 1.21828 1.00853 0.98142 0.95298 1.21507 1.01353 0.96415 0.95283 0.75005 0.90436 0.89726 0.91129 0.90094 0.74974 0.85701 0.88182 0.93182 0.91780 0.90140 0.90911 0.78145 1.22080 1.18906 0.83163 0.82525 0.82277 0.93320 0.91894 0.91730 0.90180 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.22 0.06 19.25 74.32 1.43 1.49 16 2 C -0.19 -0.12 10.06 31.13 0.31 0.19 16 3 C 0.02 -0.04 3.07 -12.60 -0.04 -0.08 16 4 H 0.10 -0.38 8.14 -2.39 -0.02 -0.40 16 5 C -0.11 0.54 5.43 30.59 0.17 0.70 16 6 C -0.12 0.66 5.17 30.59 0.16 0.82 16 7 C 0.15 -0.39 2.45 44.99 0.11 -0.28 16 8 H 0.07 0.10 7.58 -2.39 -0.02 0.08 16 9 N -0.72 3.77 5.08 -442.54 -2.25 1.52 16 10 C 0.51 -0.67 7.52 87.66 0.66 -0.01 16 11 O -0.56 -4.33 13.97 -3.01 -0.04 -4.38 16 12 C 0.04 -0.25 4.91 85.56 0.42 0.17 16 13 N -0.51 0.99 3.19 -724.43 -2.31 -1.32 16 14 C 0.03 -0.03 8.94 127.69 1.14 1.11 16 15 C 0.13 -0.28 4.61 38.21 0.18 -0.11 16 16 C -0.10 -0.06 5.28 -19.74 -0.10 -0.16 16 17 C -0.07 -0.21 2.30 71.24 0.16 -0.05 16 18 O -0.54 -2.51 12.65 -148.98 -1.89 -4.40 16 19 Si 0.79 2.09 30.17 68.60 2.07 4.16 16 20 C -0.06 0.01 8.01 22.25 0.18 0.18 16 21 C -0.18 0.13 5.46 -19.84 -0.11 0.02 16 22 C 0.51 0.66 3.36 71.24 0.24 0.90 16 23 F -0.18 -0.64 17.30 44.97 0.78 0.13 16 24 F -0.18 -0.28 16.46 44.97 0.74 0.46 16 25 F -0.18 -0.41 16.46 44.97 0.74 0.33 16 26 C -0.05 0.22 9.39 22.25 0.21 0.43 16 27 C -0.14 0.79 8.70 22.40 0.19 0.99 16 28 C -0.12 0.00 5.27 30.59 0.16 0.16 16 29 C -0.11 0.13 5.43 30.60 0.17 0.30 16 30 H 0.23 -1.35 7.80 -4.42 -0.03 -1.38 16 31 H 0.08 -0.42 8.14 -2.38 -0.02 -0.44 16 32 H 0.08 -0.53 8.14 -2.39 -0.02 -0.55 16 33 H 0.07 -0.35 7.23 -2.39 -0.02 -0.37 16 34 H 0.08 -0.58 8.14 -2.38 -0.02 -0.60 16 35 H 0.41 -4.48 8.60 -92.70 -0.80 -5.28 16 36 H 0.13 -1.20 8.06 -2.39 -0.02 -1.22 16 37 H 0.10 -1.18 7.49 -2.39 -0.02 -1.19 16 38 H 0.05 -0.26 7.46 -2.39 -0.02 -0.27 16 39 H 0.06 0.03 8.12 -2.39 -0.02 0.02 16 40 H 0.08 0.26 5.88 -2.39 -0.01 0.25 16 41 H 0.07 0.40 7.78 -2.39 -0.02 0.38 16 42 H 0.37 0.62 8.38 -74.06 -0.62 0.00 16 43 H -0.29 -2.84 7.11 99.48 0.71 -2.14 16 44 H -0.26 -1.30 7.11 99.48 0.71 -0.59 16 45 H 0.15 -0.33 4.67 -2.91 -0.01 -0.35 16 46 H 0.16 -1.20 7.60 -2.91 -0.02 -1.22 16 47 H 0.16 -1.70 7.16 -2.91 -0.02 -1.72 16 48 H 0.05 0.23 8.14 -2.39 -0.02 0.21 16 49 H 0.06 0.05 7.23 -2.39 -0.02 0.03 16 50 H 0.06 0.00 8.14 -2.38 -0.02 -0.02 16 51 H 0.08 -0.16 8.14 -2.39 -0.02 -0.18 16 Total: 0.00 -16.75 422.13 3.09 -13.67 By element: Atomic # 1 Polarization: -16.57 SS G_CDS: -0.39 Total: -16.96 kcal Atomic # 6 Polarization: 1.15 SS G_CDS: 5.64 Total: 6.78 kcal Atomic # 7 Polarization: 4.76 SS G_CDS: -4.56 Total: 0.20 kcal Atomic # 8 Polarization: -6.85 SS G_CDS: -1.93 Total: -8.77 kcal Atomic # 9 Polarization: -1.33 SS G_CDS: 2.26 Total: 0.93 kcal Atomic # 14 Polarization: 2.09 SS G_CDS: 2.07 Total: 4.16 kcal Total: -16.75 3.09 -13.67 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17761044_6406254.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -106.581 kcal (2) G-P(sol) polarization free energy of solvation -16.752 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -123.333 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.087 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.665 kcal (6) G-S(sol) free energy of system = (1) + (5) -120.246 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.46 seconds