Wall clock time and date at job start Sun Mar 7 2021 08:05:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17403 * 1 3 3 C 1.47196 * 179.97438 * 2 1 4 4 H 1.08996 * 109.47169 * 214.12071 * 3 2 1 5 5 C 1.53002 * 109.47405 * 334.12623 * 3 2 1 6 6 C 1.52992 * 109.47106 * 60.00058 * 5 3 2 7 7 C 1.52997 * 109.47482 * 60.00162 * 6 5 3 8 8 H 1.09002 * 109.47153 * 59.99783 * 7 6 5 9 9 N 1.46505 * 109.47212 * 179.97438 * 7 6 5 10 10 C 1.34769 * 119.99798 * 274.99913 * 9 7 6 11 11 O 1.21650 * 120.00627 * 0.02562 * 10 9 7 12 12 C 1.47001 * 119.99631 * 179.97438 * 10 9 7 13 13 C 1.35805 * 125.13871 * 179.72025 * 12 10 9 14 14 C 1.46251 * 106.08910 * 179.86614 * 13 12 10 15 15 C 1.39782 * 134.15457 * 180.11871 * 14 13 12 16 16 C 1.50699 * 120.09236 * 0.27211 * 15 14 13 17 17 O 1.42890 * 109.47652 * 285.00907 * 16 15 14 18 18 Si 1.86302 * 109.46926 * 165.00455 * 16 15 14 19 19 C 1.36625 * 119.81365 * 180.28311 * 15 14 13 20 20 C 1.38770 * 120.49436 * 359.97438 * 19 15 14 21 21 C 1.38262 * 120.67922 * 0.02562 * 20 19 15 22 22 O 1.35967 * 120.11912 * 179.97438 * 21 20 19 23 23 C 1.42899 * 117.00305 * 0.02562 * 22 21 20 24 24 C 1.39444 * 119.75776 * 359.97438 * 21 20 19 25 25 O 1.34770 * 133.24625 * 180.02562 * 24 21 20 26 26 C 1.53002 * 109.46817 * 300.00014 * 7 6 5 27 27 C 1.52997 * 109.47415 * 59.99873 * 26 7 6 28 28 H 4.18740 * 15.03820 * 359.97438 * 4 2 1 29 29 H 1.09002 * 109.47070 * 179.97438 * 5 3 2 30 30 H 1.08996 * 109.46550 * 299.99653 * 5 3 2 31 31 H 1.09002 * 109.47103 * 299.99915 * 6 5 3 32 32 H 1.08998 * 109.46862 * 180.02562 * 6 5 3 33 33 H 0.97005 * 119.99239 * 94.99888 * 9 7 6 34 34 H 1.08007 * 126.95660 * 359.97044 * 13 12 10 35 35 H 1.09006 * 109.46556 * 45.01226 * 16 15 14 36 36 H 0.96699 * 114.00358 * 180.02562 * 17 16 15 37 37 H 1.48492 * 109.99914 * 60.00394 * 18 16 15 38 38 H 1.48502 * 109.99862 * 181.32456 * 18 16 15 39 39 H 1.08000 * 119.75628 * 180.02562 * 19 15 14 40 40 H 1.08005 * 119.66137 * 179.97438 * 20 19 15 41 41 H 1.09008 * 109.46572 * 60.00088 * 23 22 21 42 42 H 1.08998 * 109.46942 * 179.97438 * 23 22 21 43 43 H 1.08993 * 109.47487 * 300.00420 * 23 22 21 44 44 H 1.09000 * 109.46986 * 179.97438 * 26 7 6 45 45 H 1.09002 * 109.47075 * 299.99262 * 26 7 6 46 46 H 1.09002 * 109.47045 * 59.99931 * 27 26 7 47 47 H 1.08998 * 109.47171 * 179.97438 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 1 3.0089 0.8515 0.5764 5 6 3.1566 -1.2970 0.6295 6 6 2.6472 -2.4913 -0.1797 7 6 3.1572 -2.3873 -1.6185 8 1 4.2472 -2.3868 -1.6185 9 7 2.6698 -3.5313 -2.3932 10 6 3.3477 -4.6960 -2.3740 11 8 4.3639 -4.7976 -1.7131 12 6 2.8584 -5.8440 -3.1509 13 6 3.4595 -7.0603 -3.2111 14 6 2.6273 -7.8805 -4.0908 15 6 2.6988 -9.1998 -4.5472 16 6 3.8328 -10.0904 -4.1092 17 8 5.0255 -9.7191 -4.8030 18 14 3.4150 -11.8640 -4.4975 19 6 1.7378 -9.6794 -5.3916 20 6 0.6898 -8.8667 -5.7999 21 6 0.5991 -7.5587 -5.3611 22 8 -0.4324 -6.7722 -5.7688 23 6 -1.3887 -7.3623 -6.6515 24 6 1.5693 -7.0491 -4.4988 25 8 1.7469 -5.8471 -3.9157 26 6 2.6465 -1.0897 -2.2480 27 6 3.1559 0.1047 -1.4388 28 1 -1.0500 -0.0005 -0.0009 29 1 4.2467 -1.2967 0.6290 30 1 2.7934 -1.3710 1.6545 31 1 1.5572 -2.4918 -0.1797 32 1 3.0107 -3.4157 0.2690 33 1 1.8593 -3.4504 -2.9199 34 1 4.3673 -7.3615 -2.7095 35 1 3.9875 -9.9803 -3.0358 36 1 5.7980 -10.2521 -4.5703 37 1 3.2015 -12.0274 -5.9579 38 1 4.5115 -12.7556 -4.0415 39 1 1.7937 -10.6990 -5.7433 40 1 -0.0624 -9.2596 -6.4680 41 1 -1.8502 -8.2218 -6.1651 42 1 -2.1566 -6.6290 -6.8979 43 1 -0.8890 -7.6865 -7.5643 44 1 3.0101 -1.0154 -3.2728 45 1 1.5565 -1.0903 -2.2480 46 1 4.2459 0.1052 -1.4388 47 1 2.7925 1.0291 -1.8875 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17761044_6672420.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:05:30 Heat of formation + Delta-G solvation = -16.054199 kcal Electronic energy + Delta-G solvation = -31291.099328 eV Core-core repulsion = 26987.941789 eV Total energy + Delta-G solvation = -4303.157539 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.150 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -43.60687 -41.16918 -40.54932 -39.42118 -38.96591 -37.16618 -35.81646 -33.52109 -33.18560 -31.96704 -31.89185 -31.20884 -30.12401 -28.60155 -26.30296 -25.33458 -23.90282 -23.79755 -23.49068 -21.76709 -21.67710 -21.48494 -19.70078 -18.83316 -18.56402 -18.48336 -18.12681 -17.58353 -17.44773 -16.93425 -16.60602 -16.48714 -16.28779 -15.78924 -15.66067 -15.61068 -15.36488 -15.11804 -14.71066 -14.47659 -14.13141 -14.01839 -13.99500 -13.87975 -13.74618 -13.38402 -13.26513 -13.20005 -12.93085 -12.64850 -12.42023 -12.36560 -12.23295 -12.05979 -11.78690 -11.71305 -11.54944 -11.32692 -10.95194 -10.88671 -10.86513 -10.49171 -10.15704 -9.70460 -8.93312 -5.00665 -0.53006 0.18414 0.77021 1.21486 1.35095 1.54413 1.88986 1.96528 1.97999 2.01163 2.10411 2.12173 2.42514 3.21960 3.36090 3.39887 3.60102 3.65896 3.69309 3.73785 3.88797 3.95138 3.99935 4.03986 4.07423 4.13060 4.13627 4.16611 4.20166 4.35358 4.40234 4.44047 4.47265 4.49235 4.51589 4.59321 4.79140 4.87903 4.94161 4.97208 4.99320 5.06677 5.10897 5.11943 5.14475 5.24790 5.30952 5.31733 5.36633 5.44350 5.68999 6.20863 6.40117 6.43555 6.76916 6.99731 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.175 4.175 3 C 0.016 3.984 4 H 0.096 0.904 5 C -0.108 4.108 6 C -0.132 4.132 7 C 0.145 3.855 8 H 0.094 0.906 9 N -0.713 5.713 10 C 0.603 3.397 11 O -0.510 6.510 12 C -0.023 4.023 13 C -0.105 4.105 14 C -0.082 4.082 15 C -0.051 4.051 16 C -0.075 4.075 17 O -0.533 6.533 18 Si 0.688 3.312 19 C -0.090 4.090 20 C -0.177 4.177 21 C 0.150 3.850 22 O -0.311 6.311 23 C 0.024 3.976 24 C 0.046 3.954 25 O -0.173 6.173 26 C -0.129 4.129 27 C -0.107 4.107 28 H 0.215 0.785 29 H 0.078 0.922 30 H 0.072 0.928 31 H 0.068 0.932 32 H 0.071 0.929 33 H 0.408 0.592 34 H 0.172 0.828 35 H 0.077 0.923 36 H 0.380 0.620 37 H -0.253 1.253 38 H -0.259 1.259 39 H 0.140 0.860 40 H 0.148 0.852 41 H 0.061 0.939 42 H 0.105 0.895 43 H 0.060 0.940 44 H 0.073 0.927 45 H 0.072 0.928 46 H 0.078 0.922 47 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.934 -1.371 -0.476 4.193 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.228 4.228 2 C -0.175 4.175 3 C -0.002 4.002 4 H 0.114 0.886 5 C -0.146 4.146 6 C -0.170 4.170 7 C 0.042 3.958 8 H 0.112 0.888 9 N -0.363 5.363 10 C 0.388 3.612 11 O -0.387 6.387 12 C -0.074 4.074 13 C -0.125 4.125 14 C -0.083 4.083 15 C -0.051 4.051 16 C -0.184 4.184 17 O -0.340 6.340 18 Si 0.589 3.411 19 C -0.108 4.108 20 C -0.196 4.196 21 C 0.104 3.896 22 O -0.224 6.224 23 C -0.071 4.071 24 C -0.002 4.002 25 O -0.075 6.075 26 C -0.167 4.167 27 C -0.145 4.145 28 H 0.232 0.768 29 H 0.096 0.904 30 H 0.091 0.909 31 H 0.087 0.913 32 H 0.090 0.910 33 H 0.243 0.757 34 H 0.190 0.810 35 H 0.095 0.905 36 H 0.228 0.772 37 H -0.178 1.178 38 H -0.184 1.184 39 H 0.157 0.843 40 H 0.166 0.834 41 H 0.080 0.920 42 H 0.123 0.877 43 H 0.079 0.921 44 H 0.092 0.908 45 H 0.091 0.909 46 H 0.097 0.903 47 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges -3.594 -1.267 -0.686 3.872 hybrid contribution 0.430 0.041 -0.509 0.668 sum -3.164 -1.226 -1.196 3.597 Atomic orbital electron populations 1.24929 0.95954 1.01126 1.00780 1.22899 0.94145 1.00114 1.00349 1.18431 0.84942 0.99346 0.97475 0.88618 1.21524 1.01242 0.92549 0.99288 1.21950 1.01533 0.98990 0.94533 1.21121 1.00228 0.83962 0.90517 0.88752 1.45999 1.29129 1.11495 1.49682 1.16616 0.83384 0.80946 0.80215 1.90907 1.23834 1.82261 1.41699 1.21989 0.88990 0.97227 0.99169 1.22689 1.00345 0.90751 0.98750 1.19402 0.94762 0.94197 0.99971 1.18337 0.95907 0.92029 0.98833 1.24780 0.86235 1.08601 0.98796 1.86619 1.18754 1.60735 1.67910 0.94976 0.88808 0.74098 0.83199 1.20522 0.93711 1.00299 0.96293 1.20951 1.01960 0.91699 1.04995 1.17727 0.87560 0.89851 0.94430 1.86170 1.34258 1.39207 1.62755 1.23188 0.91005 1.00420 0.92455 1.18736 0.97302 0.84393 0.99792 1.84047 1.39741 1.31789 1.51931 1.21836 1.01896 0.93267 0.99687 1.21506 1.01284 0.98151 0.93520 0.76812 0.90383 0.90949 0.91315 0.91009 0.75720 0.81012 0.90520 0.77198 1.17755 1.18409 0.84261 0.83408 0.92018 0.87670 0.92146 0.90818 0.90907 0.90312 0.90722 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.21 -0.17 19.25 29.55 0.57 0.40 16 2 C -0.18 -0.19 10.06 -37.12 -0.37 -0.56 16 3 C 0.02 -0.01 3.07 -93.41 -0.29 -0.30 16 4 H 0.10 -0.15 8.14 -51.93 -0.42 -0.57 16 5 C -0.11 0.06 5.43 -26.73 -0.15 -0.09 16 6 C -0.13 -0.09 5.27 -26.74 -0.14 -0.23 16 7 C 0.15 0.07 2.45 -67.93 -0.17 -0.10 16 8 H 0.09 0.14 7.58 -51.93 -0.39 -0.26 16 9 N -0.71 -0.87 5.07 -55.01 -0.28 -1.15 16 10 C 0.60 2.20 7.76 -12.71 -0.10 2.10 16 11 O -0.51 -3.12 16.49 5.23 0.09 -3.04 16 12 C -0.02 -0.09 7.07 -36.90 -0.26 -0.35 16 13 C -0.10 -0.37 10.68 -37.24 -0.40 -0.77 16 14 C -0.08 -0.29 6.16 -105.21 -0.65 -0.94 16 15 C -0.05 -0.10 5.30 -104.63 -0.55 -0.66 16 16 C -0.07 -0.03 2.70 36.01 0.10 0.07 16 17 O -0.53 -0.89 12.86 -35.23 -0.45 -1.34 16 18 Si 0.69 -0.81 30.20 -169.99 -5.13 -5.95 16 19 C -0.09 -0.06 8.62 -39.97 -0.34 -0.40 16 20 C -0.18 -0.05 9.03 -39.38 -0.36 -0.41 16 21 C 0.15 0.37 6.70 -39.12 -0.26 0.11 16 22 O -0.31 -0.61 10.50 -19.64 -0.21 -0.82 16 23 C 0.02 -0.05 9.81 101.05 0.99 0.94 16 24 C 0.05 0.18 7.35 -38.24 -0.28 -0.10 16 25 O -0.17 -0.70 10.28 2.69 0.03 -0.67 16 26 C -0.13 0.11 5.17 -26.73 -0.14 -0.03 16 27 C -0.11 0.15 5.43 -26.73 -0.15 0.01 16 28 H 0.22 -0.39 7.80 -54.09 -0.42 -0.81 16 29 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 30 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 31 H 0.07 0.09 7.23 -51.93 -0.38 -0.29 16 32 H 0.07 0.15 8.14 -51.93 -0.42 -0.27 16 33 H 0.41 -0.04 8.32 -40.82 -0.34 -0.38 16 34 H 0.17 0.42 8.06 -52.48 -0.42 -0.01 16 35 H 0.08 -0.07 7.96 -51.93 -0.41 -0.49 16 36 H 0.38 -0.92 8.74 45.56 0.40 -0.52 16 37 H -0.25 -0.31 6.75 56.52 0.38 0.07 16 38 H -0.26 -0.22 7.11 56.52 0.40 0.18 16 39 H 0.14 -0.18 4.85 -52.49 -0.25 -0.43 16 40 H 0.15 -0.39 6.26 -52.48 -0.33 -0.72 16 41 H 0.06 -0.22 7.66 -51.92 -0.40 -0.62 16 42 H 0.10 -0.38 8.14 -51.93 -0.42 -0.81 16 43 H 0.06 -0.20 7.66 -51.93 -0.40 -0.59 16 44 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 45 H 0.07 -0.03 7.23 -51.93 -0.38 -0.40 16 46 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 47 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 LS Contribution 391.03 15.07 5.89 5.89 Total: 0.00 -8.57 391.03 -9.33 -17.89 By element: Atomic # 1 Polarization: -3.20 SS G_CDS: -6.32 Total: -9.52 kcal Atomic # 6 Polarization: 1.64 SS G_CDS: -2.94 Total: -1.30 kcal Atomic # 7 Polarization: -0.87 SS G_CDS: -0.28 Total: -1.15 kcal Atomic # 8 Polarization: -5.32 SS G_CDS: -0.55 Total: -5.86 kcal Atomic # 14 Polarization: -0.81 SS G_CDS: -5.13 Total: -5.95 kcal Total LS contribution 5.89 Total: 5.89 kcal Total: -8.57 -9.33 -17.89 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17761044_6672420.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 1.841 kcal (2) G-P(sol) polarization free energy of solvation -8.567 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -6.727 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.328 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.895 kcal (6) G-S(sol) free energy of system = (1) + (5) -16.054 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds