Wall clock time and date at job start Sun Mar 7 2021 10:09:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53009 * 1 3 3 C 1.53003 * 109.46912 * 2 1 4 4 C 1.53005 * 109.46987 * 240.00558 * 2 1 3 5 5 O 1.45199 * 109.47040 * 120.00535 * 2 1 3 6 6 C 1.34221 * 117.00224 * 59.99681 * 5 2 1 7 7 O 1.20827 * 119.99922 * 0.02562 * 6 5 2 8 8 C 1.50700 * 120.00174 * 179.97438 * 6 5 2 9 9 H 1.09002 * 112.90415 * 311.25248 * 8 6 5 10 10 C 1.53947 * 113.66692 * 82.44005 * 8 6 5 11 11 C 1.53781 * 87.02109 * 139.93193 * 10 8 6 12 12 O 1.42910 * 113.60975 * 89.23043 * 11 10 8 13 13 C 1.52993 * 113.62015 * 220.05051 * 11 10 8 14 14 N 1.46509 * 109.47252 * 284.13960 * 13 11 10 15 15 C 1.34768 * 120.00459 * 180.02562 * 14 13 11 16 16 O 1.21596 * 119.99793 * 359.97438 * 15 14 13 17 17 C 1.47529 * 120.00462 * 180.02562 * 15 14 13 18 18 C 1.40139 * 120.19674 * 180.02562 * 17 15 14 19 19 O 1.35655 * 120.14799 * 359.97183 * 18 17 15 20 20 C 1.38708 * 119.70065 * 179.70429 * 18 17 15 21 21 C 1.38052 * 120.08490 * 0.51902 * 20 18 17 22 22 C 1.50693 * 119.80618 * 179.76734 * 21 20 18 23 23 O 1.42907 * 109.47661 * 299.73129 * 22 21 20 24 24 Si 1.86298 * 109.47618 * 179.72819 * 22 21 20 25 25 C 1.38548 * 120.39139 * 359.49791 * 21 20 18 26 26 C 1.37793 * 120.29780 * 0.22864 * 25 21 20 27 27 C 1.53775 * 113.61628 * 180.02562 * 8 6 5 28 28 H 1.08995 * 109.46607 * 299.99868 * 1 2 3 29 29 H 1.09001 * 109.46727 * 59.99195 * 1 2 3 30 30 H 1.08999 * 109.46885 * 179.97438 * 1 2 3 31 31 H 1.09002 * 109.46448 * 179.97438 * 3 2 1 32 32 H 1.08994 * 109.47778 * 300.00194 * 3 2 1 33 33 H 1.08998 * 109.46886 * 60.00726 * 3 2 1 34 34 H 1.09005 * 109.46614 * 300.00013 * 4 2 1 35 35 H 1.08998 * 109.46751 * 59.99903 * 4 2 1 36 36 H 1.08993 * 109.46892 * 180.02562 * 4 2 1 37 37 H 1.09001 * 113.61108 * 25.41771 * 10 8 6 38 38 H 1.08999 * 113.66974 * 254.46375 * 10 8 6 39 39 H 0.96700 * 113.99867 * 80.86495 * 12 11 10 40 40 H 1.08994 * 109.47667 * 164.13872 * 13 11 10 41 41 H 1.09001 * 109.47360 * 44.13032 * 13 11 10 42 42 H 0.97009 * 119.99215 * 359.97438 * 14 13 11 43 43 H 0.96700 * 113.99700 * 89.99997 * 19 18 17 44 44 H 1.08005 * 119.95813 * 180.29166 * 20 18 17 45 45 H 1.09000 * 109.46936 * 59.72752 * 22 21 20 46 46 H 0.96697 * 114.00527 * 179.97438 * 23 22 21 47 47 H 1.48506 * 109.99834 * 298.68714 * 24 22 21 48 48 H 1.48502 * 110.00011 * 59.99978 * 24 22 21 49 49 H 1.07998 * 119.85286 * 180.24780 * 25 21 20 50 50 H 1.07999 * 120.04075 * 180.02562 * 26 25 21 51 51 H 1.09001 * 113.62102 * 105.47131 * 27 8 6 52 52 H 1.09007 * 113.61244 * 334.56682 * 27 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0401 -0.7212 -1.2494 5 8 2.0141 -0.6846 1.1855 6 6 1.6534 -1.9684 1.3377 7 8 0.9567 -2.5027 0.5077 8 6 2.1183 -2.7439 2.5434 9 1 3.1887 -2.6455 2.7242 10 6 1.2587 -2.5086 3.7986 11 6 1.4020 -4.0135 4.0809 12 8 2.5480 -4.3414 4.8692 13 6 0.1184 -4.6650 4.5990 14 7 -0.0793 -4.3042 6.0051 15 6 -1.1529 -4.7674 6.6753 16 8 -1.9578 -5.4844 6.1127 17 6 -1.3522 -4.4036 8.0911 18 6 -2.4668 -4.8834 8.7919 19 8 -3.3686 -5.6846 8.1714 20 6 -2.6409 -4.5399 10.1245 21 6 -1.7250 -3.7202 10.7531 22 6 -1.9231 -3.3468 12.1996 23 8 -3.1631 -2.6518 12.3468 24 14 -0.5253 -2.2470 12.7541 25 6 -0.6219 -3.2434 10.0637 26 6 -0.4304 -3.5791 8.7411 27 6 1.6207 -4.1986 2.5696 28 1 -0.3632 0.5138 0.8900 29 1 -0.3633 0.5140 -0.8899 30 1 -0.3633 -1.0277 -0.0005 31 1 3.1301 1.4425 0.0005 32 1 1.6767 1.9564 -0.8899 33 1 1.6768 1.9563 0.8900 34 1 1.6767 -1.7488 -1.2494 35 1 1.6767 -0.2072 -2.1392 36 1 3.1300 -0.7215 -1.2491 37 1 0.2367 -2.2015 3.5766 38 1 1.7388 -1.8766 4.5457 39 1 2.4246 -4.2048 5.8185 40 1 0.1990 -5.7483 4.5098 41 1 -0.7300 -4.3142 4.0114 42 1 0.5631 -3.7324 6.4540 43 1 -3.1683 -6.6282 8.2390 44 1 -3.4959 -4.9112 10.6699 45 1 -1.9384 -4.2502 12.8092 46 1 -3.3566 -2.3806 13.2545 47 1 0.7668 -2.9694 12.6360 48 1 -0.4936 -1.0117 11.9306 49 1 0.0912 -2.6060 10.5652 50 1 0.4312 -3.2054 8.2077 51 1 2.3926 -4.9287 2.3262 52 1 0.6978 -4.3546 2.0108 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17792076_13422076.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:09:09 Heat of formation + Delta-G solvation = -183.814597 kcal Electronic energy + Delta-G solvation = -35388.668747 eV Core-core repulsion = 30514.475370 eV Total energy + Delta-G solvation = -4874.193376 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.181 amu Computer time = 1.61 seconds Orbital eigenvalues (eV) -42.34162 -41.77412 -40.83042 -39.78600 -38.44454 -38.06186 -37.24187 -36.01347 -35.47531 -35.05129 -33.12253 -31.26279 -29.83107 -28.46540 -28.37757 -27.58988 -27.00888 -26.05415 -24.00402 -23.45473 -22.59843 -21.74611 -21.01603 -20.57923 -19.79660 -18.98600 -18.40639 -18.33125 -17.81193 -17.57541 -17.52229 -17.19356 -16.77057 -16.67415 -16.59759 -16.13334 -15.95514 -15.76770 -15.58119 -15.30225 -15.19279 -14.80138 -14.68478 -14.54179 -14.26983 -14.17105 -13.98930 -13.64166 -13.51700 -13.44863 -13.31576 -13.19090 -13.09206 -13.01231 -12.94108 -12.84869 -12.55295 -12.45472 -12.39716 -12.11018 -12.09219 -11.89308 -11.68040 -11.47017 -11.19034 -11.05344 -10.84498 -10.53152 -10.35486 -10.09438 -9.89149 -4.88631 -0.54758 -0.00091 1.07815 1.29226 1.55768 1.59191 1.70522 1.83587 1.97729 2.43190 2.80416 2.99589 3.07000 3.24963 3.32538 3.37855 3.39532 3.49299 3.61868 3.64930 3.71561 3.72573 3.82805 3.89419 4.00642 4.13533 4.16182 4.26524 4.27094 4.50023 4.51875 4.52416 4.53960 4.58631 4.62905 4.64592 4.67841 4.74355 4.78746 4.80145 4.82892 4.84263 4.87952 5.00145 5.04463 5.08094 5.11443 5.12505 5.16895 5.21166 5.44628 5.49197 6.24067 6.56889 6.63527 6.72844 6.87447 6.99268 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.181 4.181 2 C 0.107 3.893 3 C -0.138 4.138 4 C -0.181 4.181 5 O -0.354 6.354 6 C 0.470 3.530 7 O -0.524 6.524 8 C -0.102 4.102 9 H 0.142 0.858 10 C -0.138 4.138 11 C 0.115 3.885 12 O -0.537 6.537 13 C 0.109 3.891 14 N -0.712 5.712 15 C 0.560 3.440 16 O -0.558 6.558 17 C -0.181 4.181 18 C 0.159 3.841 19 O -0.495 6.495 20 C -0.137 4.137 21 C -0.040 4.040 22 C -0.092 4.092 23 O -0.566 6.566 24 Si 0.777 3.223 25 C -0.153 4.153 26 C -0.051 4.051 27 C -0.105 4.105 28 H 0.064 0.936 29 H 0.085 0.915 30 H 0.062 0.938 31 H 0.069 0.931 32 H 0.094 0.906 33 H 0.069 0.931 34 H 0.062 0.938 35 H 0.086 0.914 36 H 0.064 0.936 37 H 0.092 0.908 38 H 0.111 0.889 39 H 0.393 0.607 40 H 0.073 0.927 41 H 0.074 0.926 42 H 0.412 0.588 43 H 0.410 0.590 44 H 0.144 0.856 45 H 0.100 0.900 46 H 0.406 0.594 47 H -0.276 1.276 48 H -0.291 1.291 49 H 0.139 0.861 50 H 0.170 0.830 51 H 0.093 0.907 52 H 0.104 0.896 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.175 3.938 8.201 10.466 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.238 4.238 2 C 0.071 3.929 3 C -0.195 4.195 4 C -0.238 4.238 5 O -0.271 6.271 6 C 0.315 3.685 7 O -0.414 6.414 8 C -0.121 4.121 9 H 0.159 0.841 10 C -0.175 4.175 11 C 0.073 3.927 12 O -0.345 6.345 13 C -0.015 4.015 14 N -0.366 5.366 15 C 0.348 3.652 16 O -0.437 6.437 17 C -0.185 4.185 18 C 0.113 3.887 19 O -0.308 6.308 20 C -0.155 4.155 21 C -0.041 4.041 22 C -0.201 4.201 23 O -0.376 6.376 24 Si 0.681 3.319 25 C -0.171 4.171 26 C -0.069 4.069 27 C -0.142 4.142 28 H 0.083 0.917 29 H 0.104 0.896 30 H 0.081 0.919 31 H 0.088 0.912 32 H 0.113 0.887 33 H 0.088 0.912 34 H 0.081 0.919 35 H 0.104 0.896 36 H 0.083 0.917 37 H 0.111 0.889 38 H 0.129 0.871 39 H 0.244 0.756 40 H 0.091 0.909 41 H 0.092 0.908 42 H 0.250 0.750 43 H 0.270 0.730 44 H 0.162 0.838 45 H 0.118 0.882 46 H 0.257 0.743 47 H -0.203 1.203 48 H -0.219 1.219 49 H 0.156 0.844 50 H 0.187 0.813 51 H 0.112 0.888 52 H 0.123 0.877 Dipole moment (debyes) X Y Z Total from point charges 5.082 3.953 5.923 8.748 hybrid contribution -0.363 -0.662 -0.054 0.757 sum 4.719 3.291 5.869 8.219 Atomic orbital electron populations 1.22463 0.94069 1.03544 1.03704 1.22445 0.94479 0.93355 0.82618 1.21878 1.02443 0.91129 1.04087 1.22465 1.01846 1.02057 0.97443 1.86560 1.69591 1.25345 1.45636 1.23858 0.76741 0.80685 0.87266 1.90594 1.36360 1.70456 1.43969 1.22541 1.03658 0.94889 0.91013 0.84062 1.23671 1.00587 0.97178 0.96112 1.22104 0.84558 0.93790 0.92279 1.86584 1.35485 1.89331 1.23138 1.21874 0.97371 1.00872 0.81395 1.45598 1.26072 1.52670 1.12290 1.18184 0.81071 0.79721 0.86177 1.90833 1.44751 1.38182 1.69896 1.20389 0.97963 1.05800 0.94362 1.18763 0.87048 0.93007 0.89926 1.84723 1.47505 1.22100 1.76506 1.21395 1.00557 1.00436 0.93130 1.19872 0.93925 0.94431 0.95827 1.25057 0.97388 1.03692 0.93978 1.86450 1.37919 1.77199 1.36036 0.93963 0.73406 0.76226 0.88278 1.21049 0.98741 1.01942 0.95327 1.21406 0.97808 0.93771 0.93952 1.23038 1.03678 0.94785 0.92743 0.91723 0.89606 0.91911 0.91163 0.88742 0.91189 0.91907 0.89558 0.91679 0.88931 0.87063 0.75628 0.90891 0.90794 0.74956 0.72986 0.83843 0.88225 0.74263 1.20294 1.21852 0.84411 0.81294 0.88831 0.87740 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.52 8.37 71.99 0.60 0.08 16 2 C 0.11 0.28 1.13 -10.79 -0.01 0.27 16 3 C -0.14 0.26 8.85 71.98 0.64 0.90 16 4 C -0.18 -0.53 8.37 71.98 0.60 0.08 16 5 O -0.35 -1.59 9.89 -51.33 -0.51 -2.10 16 6 C 0.47 2.19 6.80 71.24 0.48 2.68 16 7 O -0.52 -5.02 11.40 21.96 0.25 -4.77 16 8 C -0.10 0.12 4.19 -10.96 -0.05 0.07 16 9 H 0.14 -0.47 8.14 -2.39 -0.02 -0.49 16 10 C -0.14 0.64 7.03 31.18 0.22 0.86 16 11 C 0.11 -0.45 1.38 -10.26 -0.01 -0.47 16 12 O -0.54 2.67 13.41 -148.98 -2.00 0.68 16 13 C 0.11 -0.08 5.24 86.38 0.45 0.38 16 14 N -0.71 1.69 5.28 -466.28 -2.46 -0.78 16 15 C 0.56 3.23 7.76 86.69 0.67 3.91 16 16 O -0.56 -8.08 15.16 16.90 0.26 -7.83 16 17 C -0.18 -0.68 5.89 -20.01 -0.12 -0.79 16 18 C 0.16 1.02 6.72 22.84 0.15 1.17 16 19 O -0.49 -4.18 11.58 -68.79 -0.80 -4.98 16 20 C -0.14 -0.54 9.53 22.34 0.21 -0.33 16 21 C -0.04 -0.06 5.43 -19.84 -0.11 -0.17 16 22 C -0.09 0.35 2.80 71.23 0.20 0.55 16 23 O -0.57 1.26 12.74 -148.98 -1.90 -0.64 16 24 Si 0.78 -4.98 29.77 68.60 2.04 -2.94 16 25 C -0.15 0.07 8.64 22.24 0.19 0.26 16 26 C -0.05 0.12 9.54 22.52 0.21 0.33 16 27 C -0.10 0.07 6.80 31.13 0.21 0.28 16 28 H 0.06 0.13 8.14 -2.39 -0.02 0.11 16 29 H 0.09 0.00 8.14 -2.39 -0.02 -0.02 16 30 H 0.06 0.47 5.89 -2.39 -0.01 0.45 16 31 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 32 H 0.09 -0.45 8.14 -2.39 -0.02 -0.47 16 33 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 34 H 0.06 0.47 5.89 -2.38 -0.01 0.46 16 35 H 0.09 -0.01 8.14 -2.39 -0.02 -0.03 16 36 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 37 H 0.09 -0.26 8.01 -2.39 -0.02 -0.28 16 38 H 0.11 -0.96 8.14 -2.39 -0.02 -0.98 16 39 H 0.39 -4.84 7.72 -74.06 -0.57 -5.41 16 40 H 0.07 0.15 8.14 -2.39 -0.02 0.13 16 41 H 0.07 0.16 8.09 -2.39 -0.02 0.15 16 42 H 0.41 -4.04 5.45 -92.70 -0.50 -4.54 16 43 H 0.41 0.31 9.06 -74.06 -0.67 -0.36 16 44 H 0.14 0.40 8.06 -2.91 -0.02 0.37 16 45 H 0.10 -0.78 7.96 -2.39 -0.02 -0.80 16 46 H 0.41 -5.17 8.74 -74.06 -0.65 -5.82 16 47 H -0.28 0.69 7.11 99.48 0.71 1.40 16 48 H -0.29 -0.20 7.11 99.48 0.71 0.51 16 49 H 0.14 -0.41 4.85 -2.91 -0.01 -0.43 16 50 H 0.17 -1.86 6.40 -2.91 -0.02 -1.87 16 51 H 0.09 -0.06 8.14 -2.39 -0.02 -0.07 16 52 H 0.10 0.16 7.39 -2.38 -0.02 0.15 16 Total: 0.00 -29.44 420.99 -1.91 -31.35 By element: Atomic # 1 Polarization: -16.70 SS G_CDS: -1.35 Total: -18.05 kcal Atomic # 6 Polarization: 5.49 SS G_CDS: 4.56 Total: 10.05 kcal Atomic # 7 Polarization: 1.69 SS G_CDS: -2.46 Total: -0.78 kcal Atomic # 8 Polarization: -14.94 SS G_CDS: -4.69 Total: -19.63 kcal Atomic # 14 Polarization: -4.98 SS G_CDS: 2.04 Total: -2.94 kcal Total: -29.44 -1.91 -31.35 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17792076_13422076.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -152.468 kcal (2) G-P(sol) polarization free energy of solvation -29.438 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -181.906 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.908 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.346 kcal (6) G-S(sol) free energy of system = (1) + (5) -183.815 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.61 seconds