Wall clock time and date at job start Sun Mar 7 2021 10:09:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.52999 * 109.47269 * 2 1 4 4 C 1.52997 * 109.47232 * 239.99603 * 2 1 3 5 5 O 1.45206 * 109.46989 * 119.99587 * 2 1 3 6 6 C 1.34224 * 117.00077 * 60.00071 * 5 2 1 7 7 O 1.20833 * 120.00103 * 359.97438 * 6 5 2 8 8 C 1.50696 * 120.00302 * 180.02562 * 6 5 2 9 9 H 1.09012 * 112.84777 * 311.19212 * 8 6 5 10 10 C 1.53776 * 113.61915 * 82.49756 * 8 6 5 11 11 C 1.53777 * 87.08084 * 139.98406 * 10 8 6 12 12 O 1.42901 * 113.69396 * 89.13103 * 11 10 8 13 13 C 1.53010 * 113.61573 * 220.02049 * 11 10 8 14 14 N 1.46500 * 109.47153 * 282.50231 * 13 11 10 15 15 C 1.34775 * 120.00177 * 180.02562 * 14 13 11 16 16 O 1.21282 * 119.99727 * 359.97438 * 15 14 13 17 17 C 1.50699 * 120.00143 * 179.97438 * 15 14 13 18 18 C 1.50696 * 109.47081 * 179.97438 * 17 15 14 19 19 C 1.34855 * 125.89203 * 85.02284 * 18 17 15 20 20 C 1.40894 * 107.41345 * 180.02562 * 19 18 17 21 21 C 1.34847 * 107.41954 * 359.97438 * 20 19 18 22 22 C 1.50705 * 125.88864 * 179.97438 * 21 20 19 23 23 O 1.42890 * 109.47259 * 120.02913 * 22 21 20 24 24 Si 1.86300 * 109.47141 * 0.02562 * 22 21 20 25 25 N 1.36342 * 108.22099 * 359.73979 * 21 20 19 26 26 C 1.53776 * 87.08393 * 334.56836 * 11 10 8 27 27 H 1.09000 * 109.47140 * 300.00547 * 1 2 3 28 28 H 1.09001 * 109.47230 * 59.99691 * 1 2 3 29 29 H 1.09001 * 109.47375 * 180.02562 * 1 2 3 30 30 H 1.09001 * 109.47362 * 180.02562 * 3 2 1 31 31 H 1.09002 * 109.46716 * 299.99747 * 3 2 1 32 32 H 1.09000 * 109.47486 * 59.99665 * 3 2 1 33 33 H 1.09001 * 109.46832 * 300.00199 * 4 2 1 34 34 H 1.09002 * 109.47153 * 60.00008 * 4 2 1 35 35 H 1.08996 * 109.46952 * 180.02562 * 4 2 1 36 36 H 1.08992 * 113.61615 * 254.53384 * 10 8 6 37 37 H 1.09005 * 113.61341 * 25.43512 * 10 8 6 38 38 H 0.96704 * 113.99680 * 82.46240 * 12 11 10 39 39 H 1.09003 * 109.46661 * 42.49394 * 13 11 10 40 40 H 1.09001 * 109.47312 * 162.49817 * 13 11 10 41 41 H 0.97004 * 119.99952 * 359.97438 * 14 13 11 42 42 H 1.09006 * 109.47008 * 299.99690 * 17 15 14 43 43 H 1.09001 * 109.47212 * 59.99648 * 17 15 14 44 44 H 1.07987 * 126.29252 * 359.97438 * 19 18 17 45 45 H 1.07998 * 126.28793 * 180.02562 * 20 19 18 46 46 H 1.09003 * 109.46877 * 240.02896 * 22 21 20 47 47 H 0.96708 * 113.99840 * 299.99847 * 23 22 21 48 48 H 1.48497 * 110.00006 * 58.68228 * 24 22 21 49 49 H 1.48498 * 109.99973 * 180.02562 * 24 22 21 50 50 H 0.97003 * 125.63678 * 180.26105 * 25 21 20 51 51 H 1.09001 * 113.61582 * 270.88399 * 26 11 10 52 52 H 1.09006 * 113.69025 * 139.99088 * 26 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0140 -0.6844 1.1857 6 6 1.6533 -1.9683 1.3381 7 8 0.9559 -2.5025 0.5084 8 6 2.1172 -2.7432 2.5444 9 1 3.1878 -2.6448 2.7246 10 6 1.2558 -2.5082 3.7963 11 6 1.3999 -4.0123 4.0817 12 8 2.5452 -4.3400 4.8710 13 6 0.1157 -4.6638 4.5991 14 7 -0.0639 -4.3324 6.0147 15 6 -1.1346 -4.8008 6.6860 16 8 -1.9497 -5.4964 6.1178 17 6 -1.3191 -4.4603 8.1424 18 6 -2.5839 -5.1019 8.6519 19 6 -2.7001 -6.3640 9.1125 20 6 -4.0455 -6.5548 9.4848 21 6 -4.7000 -5.4019 9.2381 22 6 -6.1649 -5.1475 9.4842 23 8 -6.3122 -4.0679 10.4086 24 14 -6.9515 -6.6815 10.1905 25 7 -3.8068 -4.5044 8.7326 26 6 1.6193 -4.1979 2.5710 27 1 -0.3633 0.5139 0.8899 28 1 -0.3634 0.5139 -0.8900 29 1 -0.3634 -1.0277 0.0005 30 1 3.1300 1.4425 -0.0005 31 1 1.6767 1.9562 -0.8900 32 1 1.6767 1.9564 0.8899 33 1 1.6766 -1.7490 -1.2491 34 1 1.6767 -0.2075 -2.1392 35 1 3.1300 -0.7217 -1.2489 36 1 1.7342 -1.8743 4.5428 37 1 0.2339 -2.2022 3.5720 38 1 2.4132 -4.2253 5.8221 39 1 -0.7355 -4.2926 4.0283 40 1 0.1857 -5.7456 4.4852 41 1 0.5882 -3.7764 6.4692 42 1 -0.4676 -4.8315 8.7129 43 1 -1.3893 -3.3786 8.2566 44 1 -1.9079 -7.0945 9.1822 45 1 -4.4737 -7.4581 9.8935 46 1 -6.6519 -4.8896 8.5437 47 1 -5.9019 -4.2284 11.2695 48 1 -6.2755 -7.0620 11.4567 49 1 -8.3964 -6.4438 10.4371 50 1 -4.0086 -3.5924 8.4707 51 1 0.6968 -4.3540 2.0117 52 1 2.3909 -4.9282 2.3269 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17792076_14644196.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:09:47 Heat of formation + Delta-G solvation = -129.046020 kcal Electronic energy + Delta-G solvation = -33256.044452 eV Core-core repulsion = 28610.170822 eV Total energy + Delta-G solvation = -4645.873630 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.192 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -42.36657 -42.22798 -41.09213 -40.09212 -37.98644 -37.80078 -36.05016 -35.41265 -34.99810 -33.26568 -31.88168 -30.27340 -28.90954 -28.40234 -28.38491 -27.13671 -26.26777 -24.96009 -22.70092 -21.98698 -21.31561 -21.13700 -20.98794 -20.50074 -19.23575 -18.73564 -18.16118 -17.67332 -17.54652 -17.17370 -17.09845 -16.79244 -16.51068 -16.36689 -16.12892 -15.69080 -15.41551 -15.20683 -15.07686 -14.78383 -14.68356 -14.56126 -14.33776 -14.13565 -14.02092 -13.77485 -13.73584 -13.63488 -13.51811 -13.29578 -13.17918 -12.99916 -12.92585 -12.89683 -12.76347 -12.54508 -12.38459 -12.13975 -12.09105 -11.76197 -11.73890 -11.38214 -11.23282 -11.00169 -10.81224 -10.77483 -10.29245 -9.73571 -8.92977 -4.86501 1.11186 1.17838 1.27827 1.54108 1.63011 1.69643 1.85748 1.94369 2.18102 2.47480 2.65419 3.00513 3.25268 3.32472 3.35438 3.36244 3.56487 3.68363 3.75316 3.80842 3.81776 3.87555 3.91238 3.93788 4.06429 4.24370 4.29434 4.42996 4.45791 4.47721 4.50219 4.55478 4.57782 4.62337 4.69121 4.70939 4.73260 4.79944 4.80594 4.83239 4.87122 4.97970 5.03956 5.15048 5.24477 5.27232 5.30180 5.33669 5.55890 6.01800 6.16009 6.21226 6.29850 6.37773 6.63613 6.83200 7.08954 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.183 4.183 2 C 0.115 3.885 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.348 6.348 6 C 0.473 3.527 7 O -0.500 6.500 8 C -0.104 4.104 9 H 0.130 0.870 10 C -0.145 4.145 11 C 0.098 3.902 12 O -0.530 6.530 13 C 0.104 3.896 14 N -0.736 5.736 15 C 0.513 3.487 16 O -0.516 6.516 17 C -0.071 4.071 18 C 0.034 3.966 19 C -0.172 4.172 20 C -0.186 4.186 21 C -0.008 4.008 22 C -0.056 4.056 23 O -0.538 6.538 24 Si 0.715 3.285 25 N -0.536 5.536 26 C -0.100 4.100 27 H 0.061 0.939 28 H 0.073 0.927 29 H 0.083 0.917 30 H 0.067 0.933 31 H 0.080 0.920 32 H 0.067 0.933 33 H 0.083 0.917 34 H 0.073 0.927 35 H 0.062 0.938 36 H 0.090 0.910 37 H 0.097 0.903 38 H 0.378 0.622 39 H 0.082 0.918 40 H 0.083 0.917 41 H 0.397 0.603 42 H 0.118 0.882 43 H 0.100 0.900 44 H 0.137 0.863 45 H 0.142 0.858 46 H 0.115 0.885 47 H 0.378 0.622 48 H -0.257 1.257 49 H -0.258 1.258 50 H 0.412 0.588 51 H 0.114 0.886 52 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.612 2.826 1.712 4.895 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.240 4.240 2 C 0.080 3.920 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.266 6.266 6 C 0.316 3.684 7 O -0.387 6.387 8 C -0.123 4.123 9 H 0.148 0.852 10 C -0.182 4.182 11 C 0.056 3.944 12 O -0.336 6.336 13 C -0.019 4.019 14 N -0.390 5.390 15 C 0.298 3.702 16 O -0.390 6.390 17 C -0.112 4.112 18 C -0.080 4.080 19 C -0.196 4.196 20 C -0.211 4.211 21 C -0.121 4.121 22 C -0.166 4.166 23 O -0.344 6.344 24 Si 0.615 3.385 25 N -0.130 5.130 26 C -0.138 4.138 27 H 0.080 0.920 28 H 0.092 0.908 29 H 0.101 0.899 30 H 0.086 0.914 31 H 0.098 0.902 32 H 0.086 0.914 33 H 0.102 0.898 34 H 0.092 0.908 35 H 0.081 0.919 36 H 0.108 0.892 37 H 0.115 0.885 38 H 0.227 0.773 39 H 0.101 0.899 40 H 0.101 0.899 41 H 0.232 0.768 42 H 0.136 0.864 43 H 0.118 0.882 44 H 0.155 0.845 45 H 0.159 0.841 46 H 0.133 0.867 47 H 0.226 0.774 48 H -0.181 1.181 49 H -0.183 1.183 50 H 0.249 0.751 51 H 0.133 0.867 52 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges 2.256 2.119 0.558 3.145 hybrid contribution 0.602 1.811 1.128 2.216 sum 2.858 3.930 1.685 5.143 Atomic orbital electron populations 1.22494 0.93894 1.04696 1.02955 1.22243 0.94465 0.92397 0.82913 1.21866 1.02345 0.92423 1.03250 1.22495 1.01785 1.03105 0.96702 1.86561 1.69585 1.25234 1.45203 1.23385 0.77310 0.80715 0.86985 1.90598 1.35173 1.70015 1.42945 1.22429 1.02940 0.95449 0.91489 0.85192 1.23642 1.00812 0.97295 0.96486 1.22366 0.85287 0.93755 0.92968 1.86606 1.35436 1.89938 1.21620 1.21923 0.96936 1.01590 0.81487 1.45900 1.26773 1.54718 1.11643 1.20608 0.80902 0.79845 0.88823 1.90795 1.42458 1.36189 1.69522 1.20122 0.96094 1.02147 0.92822 1.19456 0.86035 0.94555 1.07927 1.20596 0.97184 0.95246 1.06601 1.20657 0.94317 0.97456 1.08676 1.20782 0.92487 0.91303 1.07531 1.24792 0.92811 1.01573 0.97383 1.86576 1.80000 1.40822 1.26983 0.94204 0.78521 0.81056 0.84764 1.41784 1.07419 1.13477 1.50369 1.23043 1.04094 0.94625 0.92021 0.92016 0.90817 0.89854 0.91357 0.90155 0.91426 0.89825 0.90823 0.91897 0.89185 0.88467 0.77335 0.89935 0.89908 0.76846 0.86372 0.88192 0.84530 0.84055 0.86714 0.77437 1.18084 1.18253 0.75107 0.86747 0.88793 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.12 8.37 37.16 0.31 0.19 16 2 C 0.12 0.09 1.13 -90.62 -0.10 -0.01 16 3 C -0.14 0.14 8.85 37.16 0.33 0.47 16 4 C -0.18 -0.15 8.37 37.16 0.31 0.16 16 5 O -0.35 -0.56 9.89 -39.24 -0.39 -0.95 16 6 C 0.47 0.66 6.79 36.00 0.24 0.90 16 7 O -0.50 -1.71 11.40 -18.76 -0.21 -1.92 16 8 C -0.10 0.12 4.20 -90.96 -0.38 -0.26 16 9 H 0.13 -0.22 8.14 -51.92 -0.42 -0.64 16 10 C -0.14 0.41 7.02 -25.92 -0.18 0.23 16 11 C 0.10 -0.26 1.41 -89.81 -0.13 -0.39 16 12 O -0.53 1.33 13.42 -35.23 -0.47 0.85 16 13 C 0.10 -0.19 5.26 -4.04 -0.02 -0.21 16 14 N -0.74 2.39 5.32 -60.29 -0.32 2.07 16 15 C 0.51 -0.15 7.82 -10.99 -0.09 -0.23 16 16 O -0.52 -2.46 16.03 5.56 0.09 -2.37 16 17 C -0.07 0.19 6.24 -29.04 -0.18 0.01 16 18 C 0.03 0.03 5.66 -81.79 -0.46 -0.44 16 19 C -0.17 -0.32 10.77 -39.78 -0.43 -0.75 16 20 C -0.19 -0.32 9.37 -39.78 -0.37 -0.69 16 21 C -0.01 -0.01 6.50 -81.79 -0.53 -0.54 16 22 C -0.06 -0.02 3.08 36.01 0.11 0.09 16 23 O -0.54 -0.69 12.88 -35.23 -0.45 -1.14 16 24 Si 0.72 -0.29 30.58 -169.99 -5.20 -5.49 16 25 N -0.54 -0.44 6.08 -5.44 -0.03 -0.47 16 26 C -0.10 0.12 6.80 -25.92 -0.18 -0.05 16 27 H 0.06 0.02 8.14 -51.93 -0.42 -0.41 16 28 H 0.07 -0.03 8.14 -51.93 -0.42 -0.46 16 29 H 0.08 0.20 5.89 -51.93 -0.31 -0.11 16 30 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 31 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 32 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 33 H 0.08 0.22 5.89 -51.93 -0.31 -0.09 16 34 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 35 H 0.06 0.04 8.14 -51.93 -0.42 -0.39 16 36 H 0.09 -0.36 8.14 -51.93 -0.42 -0.78 16 37 H 0.10 -0.24 7.99 -51.93 -0.41 -0.65 16 38 H 0.38 -2.28 7.60 45.56 0.35 -1.94 16 39 H 0.08 -0.06 8.05 -51.93 -0.42 -0.48 16 40 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 41 H 0.40 -2.60 7.33 -40.82 -0.30 -2.90 16 42 H 0.12 -0.59 8.14 -51.93 -0.42 -1.01 16 43 H 0.10 -0.49 8.14 -51.93 -0.42 -0.92 16 44 H 0.14 0.09 8.06 -52.49 -0.42 -0.33 16 45 H 0.14 0.01 6.22 -52.49 -0.33 -0.31 16 46 H 0.12 0.00 7.96 -51.93 -0.41 -0.41 16 47 H 0.38 -0.53 8.70 45.56 0.40 -0.13 16 48 H -0.26 -0.38 7.11 56.52 0.40 0.02 16 49 H -0.26 -0.64 7.11 56.52 0.40 -0.24 16 50 H 0.41 -0.32 8.96 -40.82 -0.37 -0.69 16 51 H 0.11 -0.07 7.39 -51.93 -0.38 -0.46 16 52 H 0.09 -0.10 8.14 -51.93 -0.42 -0.52 16 LS Contribution 423.33 15.07 6.38 6.38 Total: 0.00 -10.91 423.33 -9.97 -20.88 By element: Atomic # 1 Polarization: -8.69 SS G_CDS: -7.61 Total: -16.30 kcal Atomic # 6 Polarization: 0.22 SS G_CDS: -1.75 Total: -1.53 kcal Atomic # 7 Polarization: 1.95 SS G_CDS: -0.35 Total: 1.60 kcal Atomic # 8 Polarization: -4.09 SS G_CDS: -1.44 Total: -5.53 kcal Atomic # 14 Polarization: -0.29 SS G_CDS: -5.20 Total: -5.49 kcal Total LS contribution 6.38 Total: 6.38 kcal Total: -10.91 -9.97 -20.88 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17792076_14644196.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -108.170 kcal (2) G-P(sol) polarization free energy of solvation -10.911 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -119.081 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.966 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.876 kcal (6) G-S(sol) free energy of system = (1) + (5) -129.046 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds