Wall clock time and date at job start Sun Mar 7 2021 10:09:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.52999 * 109.47269 * 2 1 4 4 C 1.52997 * 109.47232 * 239.99603 * 2 1 3 5 5 O 1.45206 * 109.46989 * 119.99587 * 2 1 3 6 6 C 1.34224 * 117.00077 * 60.00071 * 5 2 1 7 7 O 1.20833 * 120.00103 * 359.97438 * 6 5 2 8 8 C 1.50696 * 120.00302 * 180.02562 * 6 5 2 9 9 H 1.09012 * 112.84777 * 311.19212 * 8 6 5 10 10 C 1.53776 * 113.61915 * 82.49756 * 8 6 5 11 11 C 1.53777 * 87.08084 * 139.98406 * 10 8 6 12 12 O 1.42901 * 113.69396 * 89.13103 * 11 10 8 13 13 C 1.53010 * 113.61573 * 220.02049 * 11 10 8 14 14 N 1.46500 * 109.47153 * 282.50231 * 13 11 10 15 15 C 1.34775 * 120.00177 * 180.02562 * 14 13 11 16 16 O 1.21282 * 119.99727 * 359.97438 * 15 14 13 17 17 C 1.50699 * 120.00143 * 179.97438 * 15 14 13 18 18 C 1.50696 * 109.47081 * 179.97438 * 17 15 14 19 19 C 1.34855 * 125.89203 * 85.02284 * 18 17 15 20 20 C 1.40894 * 107.41345 * 180.02562 * 19 18 17 21 21 C 1.34847 * 107.41954 * 359.97438 * 20 19 18 22 22 C 1.50705 * 125.88864 * 179.97438 * 21 20 19 23 23 O 1.42890 * 109.47259 * 120.02913 * 22 21 20 24 24 Si 1.86300 * 109.47141 * 0.02562 * 22 21 20 25 25 N 1.36342 * 108.22099 * 359.73979 * 21 20 19 26 26 C 1.53776 * 87.08393 * 334.56836 * 11 10 8 27 27 H 1.09000 * 109.47140 * 300.00547 * 1 2 3 28 28 H 1.09001 * 109.47230 * 59.99691 * 1 2 3 29 29 H 1.09001 * 109.47375 * 180.02562 * 1 2 3 30 30 H 1.09001 * 109.47362 * 180.02562 * 3 2 1 31 31 H 1.09002 * 109.46716 * 299.99747 * 3 2 1 32 32 H 1.09000 * 109.47486 * 59.99665 * 3 2 1 33 33 H 1.09001 * 109.46832 * 300.00199 * 4 2 1 34 34 H 1.09002 * 109.47153 * 60.00008 * 4 2 1 35 35 H 1.08996 * 109.46952 * 180.02562 * 4 2 1 36 36 H 1.08992 * 113.61615 * 254.53384 * 10 8 6 37 37 H 1.09005 * 113.61341 * 25.43512 * 10 8 6 38 38 H 0.96704 * 113.99680 * 82.46240 * 12 11 10 39 39 H 1.09003 * 109.46661 * 42.49394 * 13 11 10 40 40 H 1.09001 * 109.47312 * 162.49817 * 13 11 10 41 41 H 0.97004 * 119.99952 * 359.97438 * 14 13 11 42 42 H 1.09006 * 109.47008 * 299.99690 * 17 15 14 43 43 H 1.09001 * 109.47212 * 59.99648 * 17 15 14 44 44 H 1.07987 * 126.29252 * 359.97438 * 19 18 17 45 45 H 1.07998 * 126.28793 * 180.02562 * 20 19 18 46 46 H 1.09003 * 109.46877 * 240.02896 * 22 21 20 47 47 H 0.96708 * 113.99840 * 299.99847 * 23 22 21 48 48 H 1.48497 * 110.00006 * 58.68228 * 24 22 21 49 49 H 1.48498 * 109.99973 * 180.02562 * 24 22 21 50 50 H 0.97003 * 125.63678 * 180.26105 * 25 21 20 51 51 H 1.09001 * 113.61582 * 270.88399 * 26 11 10 52 52 H 1.09006 * 113.69025 * 139.99088 * 26 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0140 -0.6844 1.1857 6 6 1.6533 -1.9683 1.3381 7 8 0.9559 -2.5025 0.5084 8 6 2.1172 -2.7432 2.5444 9 1 3.1878 -2.6448 2.7246 10 6 1.2558 -2.5082 3.7963 11 6 1.3999 -4.0123 4.0817 12 8 2.5452 -4.3400 4.8710 13 6 0.1157 -4.6638 4.5991 14 7 -0.0639 -4.3324 6.0147 15 6 -1.1346 -4.8008 6.6860 16 8 -1.9497 -5.4964 6.1178 17 6 -1.3191 -4.4603 8.1424 18 6 -2.5839 -5.1019 8.6519 19 6 -2.7001 -6.3640 9.1125 20 6 -4.0455 -6.5548 9.4848 21 6 -4.7000 -5.4019 9.2381 22 6 -6.1649 -5.1475 9.4842 23 8 -6.3122 -4.0679 10.4086 24 14 -6.9515 -6.6815 10.1905 25 7 -3.8068 -4.5044 8.7326 26 6 1.6193 -4.1979 2.5710 27 1 -0.3633 0.5139 0.8899 28 1 -0.3634 0.5139 -0.8900 29 1 -0.3634 -1.0277 0.0005 30 1 3.1300 1.4425 -0.0005 31 1 1.6767 1.9562 -0.8900 32 1 1.6767 1.9564 0.8899 33 1 1.6766 -1.7490 -1.2491 34 1 1.6767 -0.2075 -2.1392 35 1 3.1300 -0.7217 -1.2489 36 1 1.7342 -1.8743 4.5428 37 1 0.2339 -2.2022 3.5720 38 1 2.4132 -4.2253 5.8221 39 1 -0.7355 -4.2926 4.0283 40 1 0.1857 -5.7456 4.4852 41 1 0.5882 -3.7764 6.4692 42 1 -0.4676 -4.8315 8.7129 43 1 -1.3893 -3.3786 8.2566 44 1 -1.9079 -7.0945 9.1822 45 1 -4.4737 -7.4581 9.8935 46 1 -6.6519 -4.8896 8.5437 47 1 -5.9019 -4.2284 11.2695 48 1 -6.2755 -7.0620 11.4567 49 1 -8.3964 -6.4438 10.4371 50 1 -4.0086 -3.5924 8.4707 51 1 0.6968 -4.3540 2.0117 52 1 2.3909 -4.9282 2.3269 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17792076_14644196.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:09:46 Heat of formation + Delta-G solvation = -132.880767 kcal Electronic energy + Delta-G solvation = -33256.210739 eV Core-core repulsion = 28610.170822 eV Total energy + Delta-G solvation = -4646.039917 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.192 amu Computer time = 1.39 seconds Orbital eigenvalues (eV) -42.36727 -42.24758 -41.05592 -40.07006 -38.05707 -37.85537 -35.96829 -35.33105 -35.02996 -33.19523 -31.92183 -30.23917 -28.84271 -28.44997 -28.36056 -26.99442 -26.25009 -24.96008 -22.67231 -21.94554 -21.35616 -21.10983 -20.90624 -20.52886 -19.21979 -18.70287 -18.15877 -17.64975 -17.50880 -17.15147 -17.12083 -16.72109 -16.45797 -16.39319 -16.04399 -15.68334 -15.42841 -15.24056 -15.04966 -14.72453 -14.69505 -14.58960 -14.25952 -14.12409 -14.04023 -13.82512 -13.64616 -13.51317 -13.45908 -13.27619 -13.16853 -12.99452 -12.92510 -12.86835 -12.70125 -12.52355 -12.35292 -12.19981 -12.05806 -11.86000 -11.64661 -11.45239 -11.14402 -11.03206 -10.83103 -10.79102 -10.21478 -9.79275 -8.96280 -4.86275 1.09170 1.10624 1.27307 1.60441 1.62827 1.66021 1.86899 1.89482 2.23333 2.50319 2.87145 3.12336 3.37498 3.38764 3.44998 3.46949 3.66883 3.67861 3.73321 3.79709 3.86306 3.92011 4.04541 4.19796 4.21830 4.34213 4.45015 4.50819 4.51937 4.53409 4.57690 4.63334 4.66043 4.69427 4.70822 4.76237 4.80495 4.81839 4.84088 4.88282 4.92310 5.06423 5.12745 5.18490 5.22826 5.26003 5.28571 5.29883 5.51327 5.98985 6.13463 6.42740 6.42876 6.66224 6.67912 6.75236 7.21795 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.106 3.894 3 C -0.138 4.138 4 C -0.181 4.181 5 O -0.354 6.354 6 C 0.470 3.530 7 O -0.526 6.526 8 C -0.104 4.104 9 H 0.140 0.860 10 C -0.134 4.134 11 C 0.117 3.883 12 O -0.540 6.540 13 C 0.109 3.891 14 N -0.716 5.716 15 C 0.513 3.487 16 O -0.574 6.574 17 C -0.066 4.066 18 C 0.032 3.968 19 C -0.200 4.200 20 C -0.202 4.202 21 C -0.019 4.019 22 C -0.060 4.060 23 O -0.552 6.552 24 Si 0.789 3.211 25 N -0.537 5.537 26 C -0.108 4.108 27 H 0.065 0.935 28 H 0.084 0.916 29 H 0.062 0.938 30 H 0.069 0.931 31 H 0.093 0.907 32 H 0.070 0.930 33 H 0.062 0.938 34 H 0.085 0.915 35 H 0.064 0.936 36 H 0.111 0.889 37 H 0.093 0.907 38 H 0.395 0.605 39 H 0.070 0.930 40 H 0.065 0.935 41 H 0.417 0.583 42 H 0.147 0.853 43 H 0.130 0.870 44 H 0.142 0.858 45 H 0.150 0.850 46 H 0.118 0.882 47 H 0.388 0.612 48 H -0.281 1.281 49 H -0.297 1.297 50 H 0.419 0.581 51 H 0.103 0.897 52 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.967 4.287 2.547 7.038 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.071 3.929 3 C -0.195 4.195 4 C -0.238 4.238 5 O -0.271 6.271 6 C 0.314 3.686 7 O -0.415 6.415 8 C -0.123 4.123 9 H 0.158 0.842 10 C -0.171 4.171 11 C 0.075 3.925 12 O -0.348 6.348 13 C -0.015 4.015 14 N -0.371 5.371 15 C 0.300 3.700 16 O -0.452 6.452 17 C -0.106 4.106 18 C -0.082 4.082 19 C -0.224 4.224 20 C -0.227 4.227 21 C -0.133 4.133 22 C -0.169 4.169 23 O -0.360 6.360 24 Si 0.692 3.308 25 N -0.133 5.133 26 C -0.146 4.146 27 H 0.084 0.916 28 H 0.103 0.897 29 H 0.081 0.919 30 H 0.088 0.912 31 H 0.112 0.888 32 H 0.089 0.911 33 H 0.081 0.919 34 H 0.104 0.896 35 H 0.083 0.917 36 H 0.130 0.870 37 H 0.111 0.889 38 H 0.246 0.754 39 H 0.088 0.912 40 H 0.084 0.916 41 H 0.255 0.745 42 H 0.165 0.835 43 H 0.148 0.852 44 H 0.159 0.841 45 H 0.168 0.832 46 H 0.136 0.864 47 H 0.237 0.763 48 H -0.206 1.206 49 H -0.225 1.225 50 H 0.256 0.744 51 H 0.121 0.879 52 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges 3.670 3.623 1.415 5.348 hybrid contribution 0.205 1.360 0.854 1.619 sum 3.875 4.983 2.269 6.708 Atomic orbital electron populations 1.22456 0.93994 1.03542 1.03720 1.22439 0.94534 0.93335 0.82602 1.21876 1.02418 0.91141 1.04095 1.22466 1.01824 1.02057 0.97502 1.86564 1.69606 1.25349 1.45573 1.23892 0.76719 0.80667 0.87285 1.90595 1.36406 1.70456 1.44032 1.22531 1.03649 0.94913 0.91189 0.84247 1.23610 1.00427 0.97234 0.95855 1.22051 0.84758 0.93740 0.91959 1.86586 1.35158 1.89985 1.23056 1.21763 0.96987 1.00589 0.82185 1.45696 1.26419 1.54031 1.10951 1.21035 0.80497 0.78842 0.89646 1.90781 1.44615 1.38962 1.70834 1.20256 0.95434 1.03853 0.91034 1.19952 0.87006 0.94470 1.06756 1.20861 0.97530 0.96204 1.07837 1.20915 0.94714 0.98055 1.08992 1.20893 0.92891 0.91515 1.07960 1.24926 0.92584 1.01804 0.97589 1.86542 1.80260 1.41397 1.27769 0.93263 0.74821 0.79835 0.82913 1.41881 1.07494 1.13781 1.50102 1.23054 1.03512 0.94733 0.93329 0.91608 0.89677 0.91908 0.91222 0.88805 0.91097 0.91927 0.89596 0.91737 0.87035 0.88860 0.75397 0.91182 0.91626 0.74480 0.83490 0.85188 0.84054 0.83207 0.86437 0.76279 1.20647 1.22450 0.74377 0.87901 0.89170 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.31 8.37 71.98 0.60 0.29 16 2 C 0.11 0.18 1.13 -10.80 -0.01 0.17 16 3 C -0.14 0.38 8.85 71.98 0.64 1.02 16 4 C -0.18 -0.41 8.37 71.98 0.60 0.20 16 5 O -0.35 -1.22 9.89 -51.35 -0.51 -1.73 16 6 C 0.47 1.71 6.79 71.23 0.48 2.20 16 7 O -0.53 -4.56 11.40 21.94 0.25 -4.31 16 8 C -0.10 0.23 4.20 -11.02 -0.05 0.18 16 9 H 0.14 -0.56 8.14 -2.38 -0.02 -0.58 16 10 C -0.13 0.89 7.02 31.12 0.22 1.10 16 11 C 0.12 -0.67 1.41 -10.27 -0.01 -0.68 16 12 O -0.54 3.51 13.42 -148.98 -2.00 1.52 16 13 C 0.11 -0.36 5.26 86.38 0.45 0.09 16 14 N -0.72 5.44 5.32 -463.04 -2.46 2.98 16 15 C 0.51 -0.59 7.82 87.66 0.69 0.09 16 16 O -0.57 -6.01 16.03 -3.04 -0.05 -6.06 16 17 C -0.07 0.47 6.24 29.10 0.18 0.65 16 18 C 0.03 0.04 5.66 41.08 0.23 0.27 16 19 C -0.20 -0.81 10.77 22.14 0.24 -0.57 16 20 C -0.20 -0.82 9.37 22.14 0.21 -0.62 16 21 C -0.02 -0.06 6.50 41.08 0.27 0.21 16 22 C -0.06 -0.08 3.08 71.24 0.22 0.14 16 23 O -0.55 -1.57 12.88 -148.98 -1.92 -3.49 16 24 Si 0.79 -0.07 30.58 68.60 2.10 2.02 16 25 N -0.54 -0.86 6.08 -171.11 -1.04 -1.90 16 26 C -0.11 0.17 6.80 31.12 0.21 0.38 16 27 H 0.06 0.04 8.14 -2.39 -0.02 0.02 16 28 H 0.08 -0.09 8.14 -2.39 -0.02 -0.10 16 29 H 0.06 0.39 5.89 -2.39 -0.01 0.38 16 30 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 31 H 0.09 -0.52 8.14 -2.39 -0.02 -0.54 16 32 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 33 H 0.06 0.43 5.89 -2.39 -0.01 0.42 16 34 H 0.09 -0.06 8.14 -2.39 -0.02 -0.08 16 35 H 0.06 0.10 8.14 -2.39 -0.02 0.08 16 36 H 0.11 -1.17 8.14 -2.39 -0.02 -1.19 16 37 H 0.09 -0.49 7.99 -2.38 -0.02 -0.51 16 38 H 0.39 -5.71 7.60 -74.05 -0.56 -6.27 16 39 H 0.07 -0.02 8.05 -2.39 -0.02 -0.03 16 40 H 0.07 0.05 8.14 -2.39 -0.02 0.03 16 41 H 0.42 -6.52 7.33 -92.71 -0.68 -7.20 16 42 H 0.15 -1.87 8.14 -2.38 -0.02 -1.89 16 43 H 0.13 -1.68 8.14 -2.39 -0.02 -1.70 16 44 H 0.14 0.27 8.06 -2.92 -0.02 0.24 16 45 H 0.15 0.14 6.22 -2.91 -0.02 0.12 16 46 H 0.12 0.06 7.96 -2.39 -0.02 0.04 16 47 H 0.39 -0.96 8.70 -74.05 -0.64 -1.61 16 48 H -0.28 -1.06 7.11 99.48 0.71 -0.35 16 49 H -0.30 -1.90 7.11 99.48 0.71 -1.19 16 50 H 0.42 -0.75 8.96 -92.71 -0.83 -1.58 16 51 H 0.10 0.08 7.39 -2.39 -0.02 0.06 16 52 H 0.09 -0.09 8.14 -2.38 -0.02 -0.11 16 Total: 0.00 -27.70 423.33 -2.16 -29.86 By element: Atomic # 1 Polarization: -22.31 SS G_CDS: -1.70 Total: -24.01 kcal Atomic # 6 Polarization: -0.05 SS G_CDS: 5.17 Total: 5.12 kcal Atomic # 7 Polarization: 4.58 SS G_CDS: -3.50 Total: 1.08 kcal Atomic # 8 Polarization: -9.85 SS G_CDS: -4.22 Total: -14.07 kcal Atomic # 14 Polarization: -0.07 SS G_CDS: 2.10 Total: 2.02 kcal Total: -27.70 -2.16 -29.86 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17792076_14644196.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -103.026 kcal (2) G-P(sol) polarization free energy of solvation -27.696 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -130.722 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.159 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.855 kcal (6) G-S(sol) free energy of system = (1) + (5) -132.881 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.40 seconds