Wall clock time and date at job start Sun Mar 7 2021 10:12:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.53006 * 109.47159 * 2 1 4 4 C 1.52998 * 109.47307 * 240.00005 * 2 1 3 5 5 O 1.45201 * 109.47006 * 119.99660 * 2 1 3 6 6 C 1.34222 * 117.00137 * 60.00074 * 5 2 1 7 7 O 1.20833 * 119.99852 * 0.02562 * 6 5 2 8 8 C 1.50696 * 120.00432 * 179.71953 * 6 5 2 9 9 H 1.09005 * 112.85060 * 311.47811 * 8 6 5 10 10 C 1.53782 * 113.61118 * 82.77912 * 8 6 5 11 11 C 1.53782 * 87.08374 * 139.98448 * 10 8 6 12 12 O 1.42898 * 113.61416 * 89.11536 * 11 10 8 13 13 C 1.52994 * 113.69084 * 220.01012 * 11 10 8 14 14 N 1.46497 * 109.47291 * 282.53201 * 13 11 10 15 15 C 1.34774 * 120.00480 * 180.02562 * 14 13 11 16 16 O 1.21700 * 119.99479 * 0.02562 * 15 14 13 17 17 C 1.46677 * 120.00264 * 179.97438 * 15 14 13 18 18 C 1.37874 * 126.23378 * 180.02562 * 17 15 14 19 19 C 1.39826 * 107.08505 * 179.97438 * 18 17 15 20 20 C 1.35454 * 107.86829 * 0.02562 * 19 18 17 21 21 C 1.50695 * 125.56490 * 179.97438 * 20 19 18 22 22 O 1.42907 * 109.47026 * 245.02412 * 21 20 19 23 23 Si 1.86294 * 109.47278 * 5.02295 * 21 20 19 24 24 N 1.35535 * 108.86764 * 359.76844 * 20 19 18 25 25 C 1.53780 * 113.61720 * 180.27478 * 8 6 5 26 26 H 1.09003 * 109.46971 * 300.00501 * 1 2 3 27 27 H 1.08999 * 109.47056 * 60.00164 * 1 2 3 28 28 H 1.08993 * 109.46962 * 180.02562 * 1 2 3 29 29 H 1.08997 * 109.47194 * 180.02562 * 3 2 1 30 30 H 1.08999 * 109.47003 * 299.99869 * 3 2 1 31 31 H 1.08997 * 109.47361 * 59.99489 * 3 2 1 32 32 H 1.09007 * 109.46920 * 299.99864 * 4 2 1 33 33 H 1.08999 * 109.47201 * 59.99919 * 4 2 1 34 34 H 1.08997 * 109.47336 * 179.97438 * 4 2 1 35 35 H 1.09001 * 113.61602 * 254.53073 * 10 8 6 36 36 H 1.09002 * 113.61850 * 25.43564 * 10 8 6 37 37 H 0.96697 * 114.00060 * 82.50672 * 12 11 10 38 38 H 1.09005 * 109.47273 * 42.53482 * 13 11 10 39 39 H 1.08999 * 109.46879 * 162.53281 * 13 11 10 40 40 H 0.97004 * 120.00007 * 0.02562 * 14 13 11 41 41 H 1.07998 * 126.45357 * 0.02562 * 18 17 15 42 42 H 1.08005 * 126.06931 * 179.97438 * 19 18 17 43 43 H 1.08998 * 109.47312 * 125.02661 * 21 20 19 44 44 H 0.96700 * 113.99635 * 180.02562 * 22 21 20 45 45 H 1.48501 * 110.00563 * 300.00074 * 23 21 20 46 46 H 1.48506 * 110.00051 * 61.32203 * 23 21 20 47 47 H 0.97000 * 125.67459 * 180.26573 * 24 20 19 48 48 H 1.09000 * 113.61285 * 334.57228 * 25 8 6 49 49 H 1.09005 * 113.61104 * 105.47596 * 25 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 6 2.0400 -0.7212 -1.2492 5 8 2.0139 -0.6844 1.1856 6 6 1.6533 -1.9683 1.3380 7 8 0.9566 -2.5027 0.5079 8 6 2.1229 -2.7452 2.5408 9 1 3.1936 -2.6438 2.7186 10 6 1.2638 -2.5166 3.7956 11 6 1.4135 -4.0212 4.0763 12 8 2.5624 -4.3454 4.8616 13 6 0.1339 -4.6800 4.5953 14 7 -0.0435 -4.3533 6.0123 15 6 -1.1102 -4.8285 6.6851 16 8 -1.9259 -5.5295 6.1155 17 6 -1.2874 -4.5019 8.1041 18 6 -2.3245 -4.9166 8.9124 19 6 -2.0967 -4.3770 10.1821 20 6 -0.9503 -3.6576 10.1284 21 6 -0.3334 -2.9045 11.2787 22 8 -0.3515 -1.5039 10.9955 23 14 -1.3071 -3.2366 12.8318 24 7 -0.4462 -3.7294 8.8723 25 6 1.6297 -4.2016 2.5644 26 1 -0.3633 0.5139 0.8900 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3633 -1.0276 0.0005 29 1 3.1300 1.4426 -0.0005 30 1 1.6767 1.9564 -0.8900 31 1 1.6766 1.9564 0.8899 32 1 1.6767 -1.7490 -1.2492 33 1 1.6767 -0.2074 -2.1392 34 1 3.1300 -0.7208 -1.2494 35 1 1.7421 -1.8834 4.5428 36 1 0.2403 -2.2134 3.5748 37 1 2.4326 -4.2339 5.8133 38 1 -0.7206 -4.3113 4.0277 39 1 0.2087 -5.7611 4.4783 40 1 0.6069 -3.7949 6.4664 41 1 -3.1556 -5.5412 8.6202 42 1 -2.7240 -4.5096 11.0513 43 1 0.6963 -3.2337 11.4180 44 1 0.0314 -0.9563 11.6945 45 1 -2.7129 -2.7921 12.6549 46 1 -1.2693 -4.6856 13.1549 47 1 0.3707 -3.3058 8.5655 48 1 0.7063 -4.3590 2.0070 49 1 2.4035 -4.9287 2.3178 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17792076_6580494.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:12:02 Heat of formation + Delta-G solvation = -124.532939 kcal Electronic energy + Delta-G solvation = -31700.677444 eV Core-core repulsion = 27210.537135 eV Total energy + Delta-G solvation = -4490.140309 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 353.176 amu Computer time = 1.15 seconds Orbital eigenvalues (eV) -42.61580 -42.24472 -41.02673 -39.90647 -37.98843 -37.82204 -36.10385 -35.54718 -34.99722 -32.39655 -31.70980 -29.82469 -28.39431 -28.37916 -27.29088 -27.00669 -25.86833 -23.26783 -22.55179 -21.63297 -21.35834 -21.06549 -20.52540 -19.97949 -18.67918 -18.36500 -17.82539 -17.55610 -17.25855 -17.02530 -16.89143 -16.55841 -16.15064 -15.93305 -15.67048 -15.32405 -15.24422 -15.12443 -15.01779 -14.67578 -14.45735 -14.37619 -14.20022 -13.84284 -13.72071 -13.54797 -13.51358 -13.35748 -13.17941 -12.97525 -12.91138 -12.87013 -12.77892 -12.56256 -12.39004 -12.09576 -12.06558 -11.78769 -11.37751 -11.26533 -11.25582 -10.82352 -10.64917 -10.41614 -10.15300 -9.32930 -5.10371 0.26750 1.04446 1.17361 1.43552 1.61347 1.62346 1.79904 1.91060 1.99734 2.29120 2.60913 2.97749 3.12931 3.21551 3.29209 3.33004 3.65473 3.67442 3.69272 3.76004 3.80901 3.91613 4.01024 4.04236 4.15382 4.21398 4.32718 4.42249 4.43610 4.50955 4.56190 4.58030 4.66016 4.71697 4.73159 4.77765 4.83980 4.87260 4.90754 4.96225 4.97364 5.04147 5.05297 5.25527 5.27702 5.51380 5.55995 5.72196 6.06392 6.19957 6.25866 6.35973 6.83056 6.97821 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.116 3.884 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.349 6.349 6 C 0.473 3.527 7 O -0.499 6.499 8 C -0.103 4.103 9 H 0.130 0.870 10 C -0.145 4.145 11 C 0.096 3.904 12 O -0.529 6.529 13 C 0.105 3.895 14 N -0.734 5.734 15 C 0.594 3.406 16 O -0.517 6.517 17 C -0.052 4.052 18 C -0.093 4.093 19 C -0.206 4.206 20 C 0.071 3.929 21 C -0.060 4.060 22 O -0.549 6.549 23 Si 0.716 3.284 24 N -0.522 5.522 25 C -0.099 4.099 26 H 0.061 0.939 27 H 0.073 0.927 28 H 0.083 0.917 29 H 0.067 0.933 30 H 0.080 0.920 31 H 0.067 0.933 32 H 0.083 0.917 33 H 0.073 0.927 34 H 0.062 0.938 35 H 0.089 0.911 36 H 0.099 0.901 37 H 0.376 0.624 38 H 0.087 0.913 39 H 0.086 0.914 40 H 0.391 0.609 41 H 0.155 0.845 42 H 0.144 0.856 43 H 0.076 0.924 44 H 0.387 0.613 45 H -0.247 1.247 46 H -0.252 1.252 47 H 0.416 0.584 48 H 0.116 0.884 49 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.001 4.841 5.490 8.865 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.080 3.920 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.266 6.266 6 C 0.316 3.684 7 O -0.387 6.387 8 C -0.122 4.122 9 H 0.148 0.852 10 C -0.183 4.183 11 C 0.054 3.946 12 O -0.335 6.335 13 C -0.019 4.019 14 N -0.388 5.388 15 C 0.382 3.618 16 O -0.392 6.392 17 C -0.165 4.165 18 C -0.119 4.119 19 C -0.230 4.230 20 C -0.047 4.047 21 C -0.170 4.170 22 O -0.356 6.356 23 Si 0.615 3.385 24 N -0.119 5.119 25 C -0.136 4.136 26 H 0.080 0.920 27 H 0.092 0.908 28 H 0.102 0.898 29 H 0.086 0.914 30 H 0.099 0.901 31 H 0.086 0.914 32 H 0.102 0.898 33 H 0.092 0.908 34 H 0.081 0.919 35 H 0.108 0.892 36 H 0.117 0.883 37 H 0.224 0.776 38 H 0.106 0.894 39 H 0.104 0.896 40 H 0.224 0.776 41 H 0.172 0.828 42 H 0.162 0.838 43 H 0.094 0.906 44 H 0.236 0.764 45 H -0.172 1.172 46 H -0.176 1.176 47 H 0.253 0.747 48 H 0.134 0.866 49 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges 3.613 3.487 3.874 6.342 hybrid contribution 0.731 0.609 -0.115 0.959 sum 4.345 4.096 3.759 7.056 Atomic orbital electron populations 1.22496 0.93868 1.04716 1.02988 1.22247 0.94488 0.92391 0.82880 1.21867 1.02329 0.92422 1.03272 1.22496 1.01770 1.03110 0.96707 1.86558 1.69552 1.25236 1.45242 1.23358 0.77351 0.80739 0.86931 1.90599 1.35214 1.70037 1.42818 1.22417 1.02890 0.95398 0.91533 0.85178 1.23658 1.00999 0.97129 0.96538 1.22408 0.85120 0.93888 0.93172 1.86611 1.35217 1.90169 1.21457 1.21982 0.97308 1.01817 0.80746 1.45758 1.26728 1.54355 1.11919 1.16968 0.81082 0.79583 0.84159 1.90900 1.42877 1.37234 1.68189 1.20361 0.97175 1.06900 0.92088 1.21305 0.98068 1.00928 0.91630 1.20603 0.98072 1.05447 0.98885 1.19961 0.96730 1.02542 0.85489 1.24517 1.05378 0.83878 1.03177 1.86485 1.85605 1.15141 1.48398 0.95122 0.80555 0.83088 0.79730 1.41888 1.21509 1.39686 1.08768 1.23043 1.04210 0.94632 0.91756 0.91984 0.90797 0.89850 0.91368 0.90137 0.91412 0.89821 0.90812 0.91908 0.89242 0.88303 0.77615 0.89445 0.89575 0.77558 0.82767 0.83839 0.90583 0.76401 1.17157 1.17617 0.74651 0.86613 0.88725 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.18 8.37 37.16 0.31 0.13 16 2 C 0.12 0.12 1.13 -90.62 -0.10 0.02 16 3 C -0.14 0.10 8.85 37.16 0.33 0.43 16 4 C -0.18 -0.19 8.37 37.16 0.31 0.12 16 5 O -0.35 -0.66 9.89 -39.24 -0.39 -1.05 16 6 C 0.47 0.80 6.79 36.00 0.24 1.05 16 7 O -0.50 -1.83 11.40 -18.76 -0.21 -2.05 16 8 C -0.10 0.08 4.19 -90.96 -0.38 -0.30 16 9 H 0.13 -0.18 8.14 -51.93 -0.42 -0.61 16 10 C -0.15 0.32 7.02 -25.92 -0.18 0.14 16 11 C 0.10 -0.20 1.41 -89.81 -0.13 -0.32 16 12 O -0.53 1.05 13.41 -35.23 -0.47 0.58 16 13 C 0.10 -0.10 5.26 -4.05 -0.02 -0.12 16 14 N -0.73 1.00 5.31 -61.62 -0.33 0.67 16 15 C 0.59 1.47 7.79 -12.85 -0.10 1.37 16 16 O -0.52 -3.34 16.88 5.19 0.09 -3.26 16 17 C -0.05 -0.10 7.06 -81.98 -0.58 -0.68 16 18 C -0.09 -0.28 10.65 -39.12 -0.42 -0.69 16 19 C -0.21 -0.45 9.32 -39.98 -0.37 -0.83 16 20 C 0.07 0.05 6.50 -81.95 -0.53 -0.48 16 21 C -0.06 0.13 3.07 36.00 0.11 0.24 16 22 O -0.55 1.15 12.86 -35.23 -0.45 0.69 16 23 Si 0.72 -1.92 30.56 -169.99 -5.19 -7.11 16 24 N -0.52 0.23 5.99 -5.70 -0.03 0.20 16 25 C -0.10 0.09 6.80 -25.92 -0.18 -0.08 16 26 H 0.06 0.04 8.14 -51.93 -0.42 -0.38 16 27 H 0.07 -0.01 8.14 -51.93 -0.42 -0.44 16 28 H 0.08 0.22 5.89 -51.93 -0.31 -0.08 16 29 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 30 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 31 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 32 H 0.08 0.23 5.89 -51.93 -0.31 -0.07 16 33 H 0.07 -0.01 8.14 -51.93 -0.42 -0.44 16 34 H 0.06 0.05 8.14 -51.93 -0.42 -0.38 16 35 H 0.09 -0.30 8.14 -51.93 -0.42 -0.72 16 36 H 0.10 -0.17 7.99 -51.93 -0.42 -0.59 16 37 H 0.38 -1.98 7.60 45.56 0.35 -1.64 16 38 H 0.09 -0.01 8.06 -51.93 -0.42 -0.43 16 39 H 0.09 0.02 8.14 -51.93 -0.42 -0.40 16 40 H 0.39 -1.75 6.46 -40.82 -0.26 -2.01 16 41 H 0.15 0.39 8.06 -52.49 -0.42 -0.03 16 42 H 0.14 0.20 6.19 -52.48 -0.32 -0.13 16 43 H 0.08 -0.32 7.96 -51.93 -0.41 -0.74 16 44 H 0.39 -2.73 8.74 45.56 0.40 -2.33 16 45 H -0.25 -0.21 7.11 56.52 0.40 0.19 16 46 H -0.25 -0.02 7.11 56.52 0.40 0.38 16 47 H 0.42 -1.52 8.19 -40.82 -0.33 -1.85 16 48 H 0.12 -0.05 7.39 -51.93 -0.38 -0.43 16 49 H 0.09 -0.08 8.14 -51.93 -0.42 -0.50 16 LS Contribution 401.08 15.07 6.04 6.04 Total: 0.00 -11.10 401.08 -9.33 -20.43 By element: Atomic # 1 Polarization: -8.45 SS G_CDS: -6.69 Total: -15.14 kcal Atomic # 6 Polarization: 1.69 SS G_CDS: -1.68 Total: 0.00 kcal Atomic # 7 Polarization: 1.23 SS G_CDS: -0.36 Total: 0.87 kcal Atomic # 8 Polarization: -3.65 SS G_CDS: -1.44 Total: -5.09 kcal Atomic # 14 Polarization: -1.92 SS G_CDS: -5.19 Total: -7.11 kcal Total LS contribution 6.04 Total: 6.04 kcal Total: -11.10 -9.33 -20.43 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17792076_6580494.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -104.102 kcal (2) G-P(sol) polarization free energy of solvation -11.104 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -115.206 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.327 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.431 kcal (6) G-S(sol) free energy of system = (1) + (5) -124.533 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.15 seconds