Wall clock time and date at job start Sun Mar 7 2021 10:12:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.53006 * 109.47159 * 2 1 4 4 C 1.52998 * 109.47307 * 240.00005 * 2 1 3 5 5 O 1.45201 * 109.47006 * 119.99660 * 2 1 3 6 6 C 1.34222 * 117.00137 * 60.00074 * 5 2 1 7 7 O 1.20833 * 119.99852 * 0.02562 * 6 5 2 8 8 C 1.50696 * 120.00432 * 179.71953 * 6 5 2 9 9 H 1.09005 * 112.85060 * 311.47811 * 8 6 5 10 10 C 1.53782 * 113.61118 * 82.77912 * 8 6 5 11 11 C 1.53782 * 87.08374 * 139.98448 * 10 8 6 12 12 O 1.42898 * 113.61416 * 89.11536 * 11 10 8 13 13 C 1.52994 * 113.69084 * 220.01012 * 11 10 8 14 14 N 1.46497 * 109.47291 * 282.53201 * 13 11 10 15 15 C 1.34774 * 120.00480 * 180.02562 * 14 13 11 16 16 O 1.21700 * 119.99479 * 0.02562 * 15 14 13 17 17 C 1.46677 * 120.00264 * 179.97438 * 15 14 13 18 18 C 1.37874 * 126.23378 * 180.02562 * 17 15 14 19 19 C 1.39826 * 107.08505 * 179.97438 * 18 17 15 20 20 C 1.35454 * 107.86829 * 0.02562 * 19 18 17 21 21 C 1.50695 * 125.56490 * 179.97438 * 20 19 18 22 22 O 1.42907 * 109.47026 * 245.02412 * 21 20 19 23 23 Si 1.86294 * 109.47278 * 5.02295 * 21 20 19 24 24 N 1.35535 * 108.86764 * 359.76844 * 20 19 18 25 25 C 1.53780 * 113.61720 * 180.27478 * 8 6 5 26 26 H 1.09003 * 109.46971 * 300.00501 * 1 2 3 27 27 H 1.08999 * 109.47056 * 60.00164 * 1 2 3 28 28 H 1.08993 * 109.46962 * 180.02562 * 1 2 3 29 29 H 1.08997 * 109.47194 * 180.02562 * 3 2 1 30 30 H 1.08999 * 109.47003 * 299.99869 * 3 2 1 31 31 H 1.08997 * 109.47361 * 59.99489 * 3 2 1 32 32 H 1.09007 * 109.46920 * 299.99864 * 4 2 1 33 33 H 1.08999 * 109.47201 * 59.99919 * 4 2 1 34 34 H 1.08997 * 109.47336 * 179.97438 * 4 2 1 35 35 H 1.09001 * 113.61602 * 254.53073 * 10 8 6 36 36 H 1.09002 * 113.61850 * 25.43564 * 10 8 6 37 37 H 0.96697 * 114.00060 * 82.50672 * 12 11 10 38 38 H 1.09005 * 109.47273 * 42.53482 * 13 11 10 39 39 H 1.08999 * 109.46879 * 162.53281 * 13 11 10 40 40 H 0.97004 * 120.00007 * 0.02562 * 14 13 11 41 41 H 1.07998 * 126.45357 * 0.02562 * 18 17 15 42 42 H 1.08005 * 126.06931 * 179.97438 * 19 18 17 43 43 H 1.08998 * 109.47312 * 125.02661 * 21 20 19 44 44 H 0.96700 * 113.99635 * 180.02562 * 22 21 20 45 45 H 1.48501 * 110.00563 * 300.00074 * 23 21 20 46 46 H 1.48506 * 110.00051 * 61.32203 * 23 21 20 47 47 H 0.97000 * 125.67459 * 180.26573 * 24 20 19 48 48 H 1.09000 * 113.61285 * 334.57228 * 25 8 6 49 49 H 1.09005 * 113.61104 * 105.47596 * 25 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 6 2.0400 -0.7212 -1.2492 5 8 2.0139 -0.6844 1.1856 6 6 1.6533 -1.9683 1.3380 7 8 0.9566 -2.5027 0.5079 8 6 2.1229 -2.7452 2.5408 9 1 3.1936 -2.6438 2.7186 10 6 1.2638 -2.5166 3.7956 11 6 1.4135 -4.0212 4.0763 12 8 2.5624 -4.3454 4.8616 13 6 0.1339 -4.6800 4.5953 14 7 -0.0435 -4.3533 6.0123 15 6 -1.1102 -4.8285 6.6851 16 8 -1.9259 -5.5295 6.1155 17 6 -1.2874 -4.5019 8.1041 18 6 -2.3245 -4.9166 8.9124 19 6 -2.0967 -4.3770 10.1821 20 6 -0.9503 -3.6576 10.1284 21 6 -0.3334 -2.9045 11.2787 22 8 -0.3515 -1.5039 10.9955 23 14 -1.3071 -3.2366 12.8318 24 7 -0.4462 -3.7294 8.8723 25 6 1.6297 -4.2016 2.5644 26 1 -0.3633 0.5139 0.8900 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3633 -1.0276 0.0005 29 1 3.1300 1.4426 -0.0005 30 1 1.6767 1.9564 -0.8900 31 1 1.6766 1.9564 0.8899 32 1 1.6767 -1.7490 -1.2492 33 1 1.6767 -0.2074 -2.1392 34 1 3.1300 -0.7208 -1.2494 35 1 1.7421 -1.8834 4.5428 36 1 0.2403 -2.2134 3.5748 37 1 2.4326 -4.2339 5.8133 38 1 -0.7206 -4.3113 4.0277 39 1 0.2087 -5.7611 4.4783 40 1 0.6069 -3.7949 6.4664 41 1 -3.1556 -5.5412 8.6202 42 1 -2.7240 -4.5096 11.0513 43 1 0.6963 -3.2337 11.4180 44 1 0.0314 -0.9563 11.6945 45 1 -2.7129 -2.7921 12.6549 46 1 -1.2693 -4.6856 13.1549 47 1 0.3707 -3.3058 8.5655 48 1 0.7063 -4.3590 2.0070 49 1 2.4035 -4.9287 2.3178 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17792076_6580494.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:12:00 Heat of formation + Delta-G solvation = -129.381469 kcal Electronic energy + Delta-G solvation = -31700.887692 eV Core-core repulsion = 27210.537135 eV Total energy + Delta-G solvation = -4490.350557 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 353.176 amu Computer time = 1.33 seconds Orbital eigenvalues (eV) -42.69342 -42.29029 -41.05454 -40.03773 -38.08350 -37.62011 -36.10973 -35.57371 -35.05068 -32.47642 -31.76169 -29.81148 -28.46085 -28.37201 -27.24691 -26.93223 -25.87218 -23.34950 -22.57919 -21.70973 -21.45851 -21.00405 -20.57283 -20.01935 -18.45396 -18.40980 -17.77784 -17.59225 -17.32321 -17.11996 -16.91252 -16.59776 -16.11266 -15.86253 -15.66658 -15.37071 -15.32580 -15.15945 -15.02439 -14.71343 -14.49364 -14.37481 -14.23486 -13.88739 -13.65311 -13.54817 -13.50803 -13.35782 -13.18773 -13.00984 -12.93814 -12.87159 -12.70512 -12.55497 -12.40223 -12.09576 -12.04506 -11.79491 -11.46789 -11.43295 -11.19443 -10.86822 -10.51680 -10.43088 -10.25651 -9.42191 -4.92782 0.14064 1.07932 1.19730 1.34460 1.58177 1.74800 1.75574 1.98955 2.10591 2.11357 2.78069 3.05742 3.28044 3.32786 3.38263 3.39093 3.65079 3.66891 3.72121 3.81701 3.83759 3.89655 4.02239 4.14359 4.15748 4.24541 4.40291 4.50462 4.52388 4.53392 4.55935 4.62532 4.68389 4.74253 4.76544 4.78104 4.80771 4.83909 4.86578 4.87600 5.00710 5.04840 5.08625 5.17398 5.21661 5.41060 5.49547 5.56874 6.10105 6.31142 6.52811 6.73031 6.86247 6.86916 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.181 4.181 2 C 0.107 3.893 3 C -0.139 4.139 4 C -0.181 4.181 5 O -0.354 6.354 6 C 0.470 3.530 7 O -0.524 6.524 8 C -0.102 4.102 9 H 0.141 0.859 10 C -0.137 4.137 11 C 0.114 3.886 12 O -0.537 6.537 13 C 0.107 3.893 14 N -0.712 5.712 15 C 0.595 3.405 16 O -0.566 6.566 17 C -0.058 4.058 18 C -0.118 4.118 19 C -0.231 4.231 20 C 0.072 3.928 21 C -0.059 4.059 22 O -0.564 6.564 23 Si 0.806 3.194 24 N -0.503 5.503 25 C -0.105 4.105 26 H 0.064 0.936 27 H 0.085 0.915 28 H 0.062 0.938 29 H 0.069 0.931 30 H 0.094 0.906 31 H 0.069 0.931 32 H 0.062 0.938 33 H 0.085 0.915 34 H 0.064 0.936 35 H 0.110 0.890 36 H 0.093 0.907 37 H 0.391 0.609 38 H 0.079 0.921 39 H 0.075 0.925 40 H 0.409 0.591 41 H 0.145 0.855 42 H 0.142 0.858 43 H 0.110 0.890 44 H 0.410 0.590 45 H -0.302 1.302 46 H -0.291 1.291 47 H 0.433 0.567 48 H 0.105 0.895 49 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.240 6.669 6.434 11.759 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.238 4.238 2 C 0.071 3.929 3 C -0.195 4.195 4 C -0.238 4.238 5 O -0.271 6.271 6 C 0.314 3.686 7 O -0.414 6.414 8 C -0.121 4.121 9 H 0.159 0.841 10 C -0.175 4.175 11 C 0.072 3.928 12 O -0.344 6.344 13 C -0.016 4.016 14 N -0.365 5.365 15 C 0.383 3.617 16 O -0.444 6.444 17 C -0.172 4.172 18 C -0.145 4.145 19 C -0.255 4.255 20 C -0.048 4.048 21 C -0.169 4.169 22 O -0.375 6.375 23 Si 0.712 3.288 24 N -0.101 5.101 25 C -0.143 4.143 26 H 0.083 0.917 27 H 0.104 0.896 28 H 0.081 0.919 29 H 0.088 0.912 30 H 0.112 0.888 31 H 0.088 0.912 32 H 0.081 0.919 33 H 0.104 0.896 34 H 0.083 0.917 35 H 0.128 0.872 36 H 0.112 0.888 37 H 0.242 0.758 38 H 0.097 0.903 39 H 0.093 0.907 40 H 0.246 0.754 41 H 0.163 0.837 42 H 0.159 0.841 43 H 0.128 0.872 44 H 0.263 0.737 45 H -0.230 1.230 46 H -0.219 1.219 47 H 0.274 0.726 48 H 0.124 0.876 49 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges 5.946 5.380 4.845 9.369 hybrid contribution -0.002 0.043 -0.386 0.388 sum 5.944 5.423 4.460 9.199 Atomic orbital electron populations 1.22462 0.94049 1.03556 1.03713 1.22442 0.94493 0.93347 0.82597 1.21879 1.02442 0.91130 1.04094 1.22465 1.01846 1.02062 0.97456 1.86561 1.69574 1.25356 1.45630 1.23855 0.76776 0.80697 0.87235 1.90597 1.36399 1.70466 1.43895 1.22507 1.03613 0.94863 0.91085 0.84079 1.23639 1.00637 0.97069 0.96113 1.22111 0.84438 0.93853 0.92382 1.86594 1.34840 1.90196 1.22806 1.21937 0.97762 1.01289 0.80657 1.45522 1.25896 1.53441 1.11671 1.17062 0.81227 0.79095 0.84326 1.90874 1.44801 1.39595 1.69144 1.20198 0.97558 1.07539 0.91930 1.21420 0.98704 1.01752 0.92592 1.20739 0.99336 1.06744 0.98710 1.20446 0.96099 1.01742 0.86489 1.24570 1.07055 0.84107 1.01155 1.86431 1.86161 1.15006 1.49913 0.94251 0.77092 0.79466 0.78031 1.41806 1.21575 1.38670 1.08059 1.23051 1.03780 0.94773 0.92686 0.91697 0.89623 0.91893 0.91168 0.88768 0.91155 0.91897 0.89578 0.91688 0.87151 0.88820 0.75796 0.90306 0.90714 0.75375 0.83686 0.84085 0.87198 0.73711 1.22955 1.21876 0.72565 0.87622 0.88841 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.42 8.37 71.98 0.60 0.18 16 2 C 0.11 0.22 1.13 -10.79 -0.01 0.21 16 3 C -0.14 0.32 8.85 71.98 0.64 0.96 16 4 C -0.18 -0.45 8.37 71.98 0.60 0.15 16 5 O -0.35 -1.38 9.89 -51.34 -0.51 -1.89 16 6 C 0.47 1.90 6.79 71.23 0.48 2.38 16 7 O -0.52 -4.70 11.40 21.94 0.25 -4.45 16 8 C -0.10 0.18 4.19 -11.01 -0.05 0.14 16 9 H 0.14 -0.55 8.14 -2.38 -0.02 -0.57 16 10 C -0.14 0.74 7.02 31.12 0.22 0.96 16 11 C 0.11 -0.53 1.41 -10.27 -0.01 -0.55 16 12 O -0.54 3.03 13.41 -148.98 -2.00 1.03 16 13 C 0.11 -0.15 5.26 86.38 0.45 0.30 16 14 N -0.71 2.17 5.31 -467.09 -2.48 -0.31 16 15 C 0.59 3.46 7.79 86.45 0.67 4.13 16 16 O -0.57 -8.53 16.88 -4.35 -0.07 -8.61 16 17 C -0.06 -0.26 7.06 40.35 0.28 0.02 16 18 C -0.12 -0.93 10.65 22.57 0.24 -0.69 16 19 C -0.23 -1.30 9.32 22.01 0.21 -1.10 16 20 C 0.07 0.06 6.50 41.34 0.27 0.33 16 21 C -0.06 0.38 3.07 71.23 0.22 0.59 16 22 O -0.56 3.77 12.86 -148.98 -1.92 1.85 16 23 Si 0.81 -4.52 30.56 68.60 2.10 -2.43 16 24 N -0.50 0.98 5.99 -171.94 -1.03 -0.05 16 25 C -0.11 0.14 6.80 31.12 0.21 0.35 16 26 H 0.06 0.10 8.14 -2.39 -0.02 0.08 16 27 H 0.08 -0.04 8.14 -2.39 -0.02 -0.06 16 28 H 0.06 0.43 5.89 -2.39 -0.01 0.42 16 29 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 30 H 0.09 -0.48 8.14 -2.39 -0.02 -0.50 16 31 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 32 H 0.06 0.44 5.89 -2.38 -0.01 0.43 16 33 H 0.09 -0.04 8.14 -2.39 -0.02 -0.06 16 34 H 0.06 0.11 8.14 -2.39 -0.02 0.09 16 35 H 0.11 -1.02 8.14 -2.39 -0.02 -1.04 16 36 H 0.09 -0.35 7.99 -2.39 -0.02 -0.37 16 37 H 0.39 -5.09 7.60 -74.06 -0.56 -5.65 16 38 H 0.08 0.08 8.06 -2.38 -0.02 0.06 16 39 H 0.07 0.12 8.14 -2.39 -0.02 0.10 16 40 H 0.41 -4.38 6.46 -92.71 -0.60 -4.98 16 41 H 0.15 1.23 8.06 -2.91 -0.02 1.20 16 42 H 0.14 0.70 6.19 -2.91 -0.02 0.68 16 43 H 0.11 -1.35 7.96 -2.39 -0.02 -1.37 16 44 H 0.41 -7.02 8.74 -74.06 -0.65 -7.67 16 45 H -0.30 -1.02 7.11 99.48 0.71 -0.31 16 46 H -0.29 -0.27 7.11 99.48 0.71 0.44 16 47 H 0.43 -4.20 8.19 -92.71 -0.76 -4.95 16 48 H 0.11 0.08 7.39 -2.39 -0.02 0.07 16 49 H 0.09 -0.11 8.14 -2.38 -0.02 -0.13 16 Total: 0.00 -28.83 401.08 -2.14 -30.97 By element: Atomic # 1 Polarization: -23.00 SS G_CDS: -1.51 Total: -24.51 kcal Atomic # 6 Polarization: 3.35 SS G_CDS: 5.03 Total: 8.38 kcal Atomic # 7 Polarization: 3.15 SS G_CDS: -3.51 Total: -0.37 kcal Atomic # 8 Polarization: -7.81 SS G_CDS: -4.24 Total: -12.05 kcal Atomic # 14 Polarization: -4.52 SS G_CDS: 2.10 Total: -2.43 kcal Total: -28.83 -2.14 -30.97 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17792076_6580494.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -98.408 kcal (2) G-P(sol) polarization free energy of solvation -28.829 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -127.238 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.144 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.973 kcal (6) G-S(sol) free energy of system = (1) + (5) -129.381 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.33 seconds