Wall clock time and date at job start Sun Mar 7 2021 10:12:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50693 * 1 3 3 C 1.33814 * 122.44978 * 2 1 4 4 C 1.50702 * 124.52438 * 359.95885 * 3 2 1 5 5 O 1.42903 * 109.46671 * 313.74164 * 4 3 2 6 6 Si 1.86298 * 109.47161 * 193.74332 * 4 3 2 7 7 S 1.70618 * 110.95657 * 179.97438 * 3 2 1 8 8 C 1.75836 * 91.56399 * 359.83394 * 7 3 2 9 9 C 1.46582 * 125.46177 * 180.18337 * 8 7 3 10 10 O 1.21701 * 120.00170 * 180.12492 * 9 8 7 11 11 N 1.34774 * 119.99804 * 0.12076 * 9 8 7 12 12 C 1.46502 * 120.00096 * 180.02562 * 11 9 8 13 13 C 1.52995 * 109.47318 * 179.97438 * 12 11 9 14 14 O 1.42898 * 112.85313 * 311.19616 * 13 12 11 15 15 C 1.53784 * 113.61393 * 82.50044 * 13 12 11 16 16 C 1.53778 * 87.08161 * 139.98023 * 15 13 12 17 17 H 1.09001 * 113.69252 * 89.12780 * 16 15 13 18 18 C 1.50704 * 113.61470 * 220.01849 * 16 15 13 19 19 O 1.20822 * 119.99713 * 97.49855 * 18 16 15 20 20 O 1.34224 * 120.00103 * 277.49533 * 18 16 15 21 21 C 1.45203 * 117.00184 * 179.97438 * 20 18 16 22 22 C 1.53001 * 109.46508 * 60.00085 * 21 20 18 23 23 C 1.52999 * 109.47144 * 180.02562 * 21 20 18 24 24 C 1.52998 * 109.46923 * 300.00596 * 21 20 18 25 25 C 1.53774 * 113.61513 * 179.97438 * 13 12 11 26 26 C 1.36646 * 109.07939 * 0.28491 * 8 7 3 27 27 H 1.09004 * 109.47129 * 275.84069 * 1 2 3 28 28 H 1.09002 * 109.47437 * 35.84106 * 1 2 3 29 29 H 1.09000 * 109.47196 * 155.84825 * 1 2 3 30 30 H 1.08999 * 109.47175 * 73.73989 * 4 3 2 31 31 H 0.96697 * 114.00391 * 299.99916 * 5 4 3 32 32 H 1.48496 * 110.00089 * 58.68103 * 6 4 3 33 33 H 1.48503 * 110.00063 * 179.97438 * 6 4 3 34 34 H 0.97007 * 120.00061 * 359.97438 * 11 9 8 35 35 H 1.09005 * 109.46609 * 300.00097 * 12 11 9 36 36 H 1.08997 * 109.47194 * 59.99894 * 12 11 9 37 37 H 0.96703 * 113.99878 * 50.33036 * 14 13 12 38 38 H 1.09002 * 113.61752 * 254.52952 * 15 13 12 39 39 H 1.09004 * 113.61215 * 25.43171 * 15 13 12 40 40 H 1.09000 * 109.46723 * 60.00695 * 22 21 20 41 41 H 1.09003 * 109.46384 * 179.97438 * 22 21 20 42 42 H 1.08994 * 109.47701 * 299.99636 * 22 21 20 43 43 H 1.08999 * 109.47197 * 60.00200 * 23 21 20 44 44 H 1.09001 * 109.46591 * 180.02562 * 23 21 20 45 45 H 1.09000 * 109.47041 * 300.00054 * 23 21 20 46 46 H 1.08998 * 109.47705 * 59.99631 * 24 21 20 47 47 H 1.08998 * 109.46655 * 179.97438 * 24 21 20 48 48 H 1.08999 * 109.47067 * 299.99585 * 24 21 20 49 49 H 1.08996 * 113.61788 * 334.57172 * 25 13 12 50 50 H 1.09001 * 113.61363 * 105.39093 * 25 13 12 51 51 H 1.08000 * 123.35259 * 179.97438 * 26 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.2249 1.1292 0.0000 4 6 1.6355 2.5162 -0.0009 5 8 0.5924 2.5897 -0.9750 6 14 2.9630 3.7549 -0.4178 7 16 3.8969 0.7892 0.0007 8 6 3.5937 -0.9428 0.0061 9 6 4.6231 -1.9863 0.0129 10 8 4.3001 -3.1597 0.0139 11 7 5.9272 -1.6463 0.0180 12 6 6.9561 -2.6892 0.0243 13 6 8.3411 -2.0392 0.0285 14 8 8.4791 -1.0204 -0.9639 15 6 8.8150 -1.6082 1.4266 16 6 10.2099 -2.1151 1.0239 17 1 10.8279 -1.3588 0.5400 18 6 10.9316 -2.8400 2.1307 19 8 10.9107 -4.0472 2.1761 20 8 11.5975 -2.1445 3.0658 21 6 12.2688 -2.9085 4.1022 22 6 13.3054 -3.8344 3.4624 23 6 12.9675 -1.9513 5.0699 24 6 11.2405 -3.7449 4.8662 25 6 9.4973 -3.0531 0.0359 26 6 2.2446 -1.1601 0.0006 27 1 -0.3633 0.1046 1.0224 28 1 -0.3634 0.8331 -0.6017 29 1 -0.3633 -0.9377 -0.4205 30 1 1.2279 2.7384 0.9853 31 1 0.8836 2.4028 -1.8779 32 1 3.5487 3.4438 -1.7465 33 1 2.3943 5.1267 -0.4226 34 1 6.1847 -0.7110 0.0168 35 1 6.8415 -3.3072 0.9149 36 1 6.8494 -3.3102 -0.8651 37 1 7.7668 -0.3663 -0.9577 38 1 8.7720 -0.5313 1.5895 39 1 8.3604 -2.1784 2.2368 40 1 14.0380 -3.2385 2.9181 41 1 13.8097 -4.4076 4.2405 42 1 12.8074 -4.5164 2.7733 43 1 12.2287 -1.2920 5.5255 44 1 13.4718 -2.5249 5.8475 45 1 13.7000 -1.3551 4.5257 46 1 10.7424 -4.4269 4.1771 47 1 11.7446 -4.3188 5.6438 48 1 10.5020 -3.0853 5.3219 49 1 9.2292 -4.0180 0.4659 50 1 10.0044 -3.1440 -0.9247 51 1 1.8019 -2.1452 0.0020 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17792076_6739946.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:12:12 Heat of formation + Delta-G solvation = -140.821719 kcal Electronic energy + Delta-G solvation = -33396.735028 eV Core-core repulsion = 28776.702782 eV Total energy + Delta-G solvation = -4620.032246 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 384.153 amu Computer time = 1.32 seconds Orbital eigenvalues (eV) -42.26745 -41.21617 -40.45575 -39.72981 -37.97326 -37.57249 -36.07804 -35.43833 -34.97646 -32.42475 -30.24994 -29.90279 -28.37673 -28.36376 -27.21633 -26.89076 -25.66038 -24.30448 -22.60461 -21.91651 -21.06089 -20.55944 -20.31240 -19.71798 -18.43485 -18.01681 -17.72825 -17.51469 -17.25363 -17.03103 -16.91474 -16.69676 -16.47895 -16.03947 -15.96782 -15.63848 -15.24648 -15.19239 -14.87637 -14.66288 -14.54460 -14.45838 -14.27230 -13.94089 -13.74571 -13.58794 -13.53008 -13.36569 -13.20706 -13.16004 -12.99614 -12.92097 -12.88533 -12.82331 -12.53466 -12.44937 -12.43235 -12.35514 -12.06851 -11.85604 -11.72316 -11.35743 -11.22899 -11.19908 -10.87258 -10.79361 -10.38342 -9.84123 -9.48856 -5.27749 -0.69627 0.20513 0.59682 0.99769 1.20261 1.25012 1.40608 1.63769 1.75317 1.83542 2.09831 2.65138 3.01540 3.07189 3.24742 3.33337 3.36437 3.46337 3.65408 3.70778 3.77738 3.83665 3.93445 4.06796 4.08678 4.25416 4.26266 4.34764 4.45820 4.48106 4.51707 4.52689 4.57725 4.59603 4.68879 4.73341 4.75187 4.75994 4.80075 4.81151 4.85635 4.89283 4.98137 4.99760 5.06049 5.07827 5.27086 5.29405 5.33132 5.39970 5.58338 6.12151 6.13029 6.27521 6.85632 6.96765 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.108 4.108 2 C -0.088 4.088 3 C -0.235 4.235 4 C -0.032 4.032 5 O -0.517 6.517 6 Si 0.653 3.347 7 S 0.194 5.806 8 C -0.262 4.262 9 C 0.595 3.405 10 O -0.519 6.519 11 N -0.729 5.729 12 C 0.105 3.895 13 C 0.096 3.904 14 O -0.529 6.529 15 C -0.146 4.146 16 C -0.104 4.104 17 H 0.131 0.869 18 C 0.473 3.527 19 O -0.500 6.500 20 O -0.348 6.348 21 C 0.116 3.884 22 C -0.184 4.184 23 C -0.142 4.142 24 C -0.183 4.183 25 C -0.099 4.099 26 C -0.046 4.046 27 H 0.070 0.930 28 H 0.091 0.909 29 H 0.065 0.935 30 H 0.129 0.871 31 H 0.379 0.621 32 H -0.241 1.241 33 H -0.233 1.233 34 H 0.394 0.606 35 H 0.088 0.912 36 H 0.085 0.915 37 H 0.377 0.623 38 H 0.091 0.909 39 H 0.099 0.901 40 H 0.062 0.938 41 H 0.073 0.927 42 H 0.083 0.917 43 H 0.067 0.933 44 H 0.079 0.921 45 H 0.067 0.933 46 H 0.083 0.917 47 H 0.073 0.927 48 H 0.061 0.939 49 H 0.115 0.885 50 H 0.094 0.906 51 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.686 5.047 1.989 5.681 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.167 4.167 2 C -0.101 4.101 3 C -0.354 4.354 4 C -0.144 4.144 5 O -0.324 6.324 6 Si 0.551 3.449 7 S 0.463 5.537 8 C -0.382 4.382 9 C 0.382 3.618 10 O -0.396 6.396 11 N -0.383 5.383 12 C -0.018 4.018 13 C 0.054 3.946 14 O -0.335 6.335 15 C -0.183 4.183 16 C -0.123 4.123 17 H 0.148 0.852 18 C 0.316 3.684 19 O -0.387 6.387 20 O -0.266 6.266 21 C 0.080 3.920 22 C -0.241 4.241 23 C -0.199 4.199 24 C -0.241 4.241 25 C -0.137 4.137 26 C -0.080 4.080 27 H 0.089 0.911 28 H 0.110 0.890 29 H 0.084 0.916 30 H 0.147 0.853 31 H 0.228 0.772 32 H -0.164 1.164 33 H -0.156 1.156 34 H 0.229 0.771 35 H 0.106 0.894 36 H 0.104 0.896 37 H 0.225 0.775 38 H 0.110 0.890 39 H 0.117 0.883 40 H 0.081 0.919 41 H 0.092 0.908 42 H 0.102 0.898 43 H 0.086 0.914 44 H 0.098 0.902 45 H 0.086 0.914 46 H 0.101 0.899 47 H 0.092 0.908 48 H 0.080 0.920 49 H 0.133 0.867 50 H 0.112 0.888 51 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges 3.294 5.164 1.856 6.400 hybrid contribution -2.136 -0.589 -0.591 2.293 sum 1.158 4.575 1.265 4.886 Atomic orbital electron populations 1.20761 0.88771 1.03903 1.03233 1.18729 0.98412 0.90620 1.02318 1.24327 0.98184 1.00796 1.12130 1.24427 0.97745 0.95400 0.96780 1.86593 1.34147 1.91805 1.19853 0.95462 0.81641 0.80497 0.87285 1.82610 1.03659 0.98529 1.68941 1.24572 0.97904 0.96879 1.18811 1.16900 0.81323 0.87491 0.76121 1.90885 1.81433 1.18177 1.49106 1.45723 1.05669 1.09940 1.76942 1.21998 0.84858 0.90552 1.04442 1.22399 0.93512 0.90217 0.88455 1.86610 1.51419 1.40082 1.55340 1.23683 0.93521 1.03410 0.97715 1.22416 0.96023 1.00127 0.93709 0.85151 1.23372 0.76212 0.86850 0.81929 1.90595 1.58420 1.15430 1.74281 1.86561 1.61576 1.41906 1.36517 1.22241 0.92122 0.91647 0.85989 1.22497 0.98710 1.00316 1.02570 1.21866 1.00688 0.99315 0.98022 1.22495 0.99400 1.00882 1.01283 1.23033 0.93427 0.97236 0.99982 1.20761 0.90894 1.00186 0.96112 0.91087 0.89045 0.91586 0.85344 0.77242 1.16423 1.15637 0.77113 0.89430 0.89628 0.77487 0.89019 0.88271 0.91918 0.90848 0.89818 0.91385 0.90172 0.91376 0.89852 0.90843 0.91951 0.86656 0.88759 0.82716 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.07 9.74 36.00 0.35 0.42 16 2 C -0.09 0.00 5.75 -106.46 -0.61 -0.61 16 3 C -0.24 0.27 5.61 -35.86 -0.20 0.07 16 4 C -0.03 0.06 2.68 36.01 0.10 0.16 16 5 O -0.52 0.53 10.27 -35.23 -0.36 0.17 16 6 Si 0.65 -1.68 30.97 -169.99 -5.26 -6.94 16 7 S 0.19 -0.45 19.33 -107.50 -2.08 -2.53 16 8 C -0.26 -0.14 6.45 -36.79 -0.24 -0.38 16 9 C 0.60 1.09 7.78 -12.90 -0.10 0.99 16 10 O -0.52 -3.00 16.84 5.19 0.09 -2.91 16 11 N -0.73 1.06 5.35 -61.65 -0.33 0.73 16 12 C 0.10 -0.13 5.32 -4.04 -0.02 -0.15 16 13 C 0.10 -0.22 1.48 -89.81 -0.13 -0.35 16 14 O -0.53 1.12 13.40 -35.23 -0.47 0.65 16 15 C -0.15 0.38 7.01 -25.92 -0.18 0.20 16 16 C -0.10 0.12 4.20 -90.98 -0.38 -0.26 16 17 H 0.13 -0.23 8.14 -51.93 -0.42 -0.65 16 18 C 0.47 0.64 6.79 36.01 0.24 0.88 16 19 O -0.50 -1.67 11.40 -18.75 -0.21 -1.88 16 20 O -0.35 -0.54 9.89 -39.24 -0.39 -0.93 16 21 C 0.12 0.08 1.13 -90.62 -0.10 -0.02 16 22 C -0.18 -0.15 8.37 37.16 0.31 0.17 16 23 C -0.14 0.14 8.85 37.16 0.33 0.47 16 24 C -0.18 -0.11 8.37 37.16 0.31 0.20 16 25 C -0.10 0.12 6.79 -25.94 -0.18 -0.06 16 26 C -0.05 -0.05 9.78 -40.43 -0.40 -0.44 16 27 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 28 H 0.09 -0.05 5.54 -51.93 -0.29 -0.33 16 29 H 0.07 -0.07 8.10 -51.93 -0.42 -0.49 16 30 H 0.13 -0.34 7.96 -51.93 -0.41 -0.75 16 31 H 0.38 -1.33 8.70 45.56 0.40 -0.93 16 32 H -0.24 0.19 7.11 56.52 0.40 0.59 16 33 H -0.23 -0.09 7.11 56.52 0.40 0.31 16 34 H 0.39 -1.65 6.15 -40.82 -0.25 -1.90 16 35 H 0.09 -0.06 7.94 -51.93 -0.41 -0.47 16 36 H 0.09 0.00 8.14 -51.93 -0.42 -0.43 16 37 H 0.38 -1.99 7.33 45.56 0.33 -1.65 16 38 H 0.09 -0.35 8.14 -51.93 -0.42 -0.77 16 39 H 0.10 -0.23 7.92 -51.93 -0.41 -0.64 16 40 H 0.06 0.03 8.14 -51.93 -0.42 -0.39 16 41 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 42 H 0.08 0.21 5.89 -51.93 -0.31 -0.09 16 43 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 44 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 45 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 46 H 0.08 0.19 5.89 -51.93 -0.31 -0.11 16 47 H 0.07 -0.03 8.14 -51.93 -0.42 -0.46 16 48 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 49 H 0.12 -0.09 7.39 -51.93 -0.38 -0.47 16 50 H 0.09 -0.10 8.14 -51.93 -0.42 -0.52 16 51 H 0.16 0.17 8.06 -52.49 -0.42 -0.25 16 LS Contribution 422.35 15.07 6.36 6.36 Total: 0.00 -8.66 422.35 -10.71 -19.37 By element: Atomic # 1 Polarization: -6.20 SS G_CDS: -7.15 Total: -13.36 kcal Atomic # 6 Polarization: 2.18 SS G_CDS: -0.90 Total: 1.28 kcal Atomic # 7 Polarization: 1.06 SS G_CDS: -0.33 Total: 0.73 kcal Atomic # 8 Polarization: -3.56 SS G_CDS: -1.35 Total: -4.91 kcal Atomic # 14 Polarization: -1.68 SS G_CDS: -5.26 Total: -6.94 kcal Atomic # 16 Polarization: -0.45 SS G_CDS: -2.08 Total: -2.53 kcal Total LS contribution 6.36 Total: 6.36 kcal Total: -8.66 -10.71 -19.37 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17792076_6739946.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -121.454 kcal (2) G-P(sol) polarization free energy of solvation -8.657 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -130.112 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.710 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.368 kcal (6) G-S(sol) free energy of system = (1) + (5) -140.822 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.32 seconds