Wall clock time and date at job start Sun Mar 7 2021 10:12:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.53001 * 109.47237 * 2 1 4 4 C 1.53003 * 109.47097 * 239.99921 * 2 1 3 5 5 O 1.45202 * 109.47454 * 120.00028 * 2 1 3 6 6 C 1.34227 * 117.00113 * 59.99669 * 5 2 1 7 7 O 1.20829 * 119.99881 * 0.02562 * 6 5 2 8 8 C 1.50697 * 120.00323 * 180.02562 * 6 5 2 9 9 H 1.09002 * 112.84782 * 309.66950 * 8 6 5 10 10 C 1.53786 * 113.61519 * 80.86360 * 8 6 5 11 11 C 1.54049 * 86.98426 * 140.01979 * 10 8 6 12 12 O 1.42897 * 113.68845 * 89.12814 * 11 10 8 13 13 C 1.53002 * 113.62024 * 220.02020 * 11 10 8 14 14 N 1.46503 * 109.47362 * 282.49966 * 13 11 10 15 15 C 1.34772 * 119.99988 * 180.02562 * 14 13 11 16 16 O 1.21640 * 120.00099 * 359.97438 * 15 14 13 17 17 C 1.47188 * 119.99827 * 180.02562 * 15 14 13 18 18 C 1.36004 * 123.46143 * 0.02562 * 17 15 14 19 19 S 1.70445 * 110.81760 * 179.97438 * 18 17 15 20 20 C 1.75498 * 92.44648 * 0.02562 * 19 18 17 21 21 C 1.50696 * 124.71590 * 179.97438 * 20 19 18 22 22 O 1.42898 * 109.47430 * 245.02271 * 21 20 19 23 23 Si 1.86309 * 109.46958 * 5.02306 * 21 20 19 24 24 C 1.32770 * 110.57538 * 359.73580 * 20 19 18 25 25 C 1.53781 * 113.61630 * 178.47308 * 8 6 5 26 26 H 1.09001 * 109.46913 * 299.99791 * 1 2 3 27 27 H 1.09000 * 109.47260 * 60.00241 * 1 2 3 28 28 H 1.09001 * 109.47048 * 180.02562 * 1 2 3 29 29 H 1.08997 * 109.47344 * 180.02562 * 3 2 1 30 30 H 1.09000 * 109.46798 * 300.00042 * 3 2 1 31 31 H 1.08999 * 109.47155 * 59.99502 * 3 2 1 32 32 H 1.09001 * 109.46916 * 299.99767 * 4 2 1 33 33 H 1.09000 * 109.46704 * 59.99988 * 4 2 1 34 34 H 1.08997 * 109.47113 * 179.97438 * 4 2 1 35 35 H 1.08992 * 113.61675 * 254.61723 * 10 8 6 36 36 H 1.09000 * 113.60973 * 25.52011 * 10 8 6 37 37 H 0.96701 * 113.99930 * 82.46646 * 12 11 10 38 38 H 1.08998 * 109.46948 * 42.50131 * 13 11 10 39 39 H 1.09005 * 109.47399 * 162.49568 * 13 11 10 40 40 H 0.97003 * 119.99480 * 359.97438 * 14 13 11 41 41 H 1.08002 * 124.59621 * 0.02562 * 18 17 15 42 42 H 1.09003 * 109.47659 * 125.02022 * 21 20 19 43 43 H 0.96703 * 113.99855 * 60.00271 * 22 21 20 44 44 H 1.48495 * 109.99912 * 58.68113 * 23 21 20 45 45 H 1.48498 * 109.99824 * 180.02562 * 23 21 20 46 46 H 1.08005 * 123.46305 * 180.24933 * 24 20 19 47 47 H 1.08999 * 113.61567 * 334.48200 * 25 8 6 48 48 H 1.08998 * 113.61196 * 105.38554 * 25 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2493 5 8 2.0141 -0.6845 1.1855 6 6 1.6534 -1.9684 1.3379 7 8 0.9567 -2.5028 0.5079 8 6 2.1174 -2.7434 2.5442 9 1 3.1922 -2.6665 2.7089 10 6 1.2802 -2.4779 3.8065 11 6 1.3966 -3.9853 4.1020 12 8 2.5465 -4.3314 4.8765 13 6 0.1069 -4.6051 4.6438 14 7 -0.0441 -4.2593 6.0594 15 6 -1.1142 -4.6997 6.7502 16 8 -1.9550 -5.3838 6.1982 17 6 -1.2661 -4.3518 8.1723 18 6 -0.3711 -3.5912 8.8580 19 16 -0.8629 -3.3893 10.4774 20 6 -2.3109 -4.3511 10.2364 21 6 -3.3328 -4.6461 11.3040 22 8 -3.3429 -6.0482 11.5794 23 14 -2.8973 -3.7114 12.8557 24 6 -2.3837 -4.7786 8.9815 25 6 1.5890 -4.1868 2.5897 26 1 -0.3633 0.5138 0.8900 27 1 -0.3634 0.5138 -0.8900 28 1 -0.3633 -1.0277 0.0005 29 1 3.1300 1.4425 -0.0005 30 1 1.6767 1.9563 -0.8900 31 1 1.6766 1.9564 0.8899 32 1 1.6767 -1.7490 -1.2492 33 1 1.6766 -0.2074 -2.1392 34 1 3.1300 -0.7209 -1.2495 35 1 1.7834 -1.8476 4.5396 36 1 0.2619 -2.1519 3.5944 37 1 2.4316 -4.2067 5.8285 38 1 -0.7447 -4.2202 4.0829 39 1 0.1520 -5.6890 4.5373 40 1 0.6266 -3.7141 6.4996 41 1 0.5289 -3.1713 8.4337 42 1 -4.3192 -4.3366 10.9583 43 1 -2.4956 -6.3937 11.8923 44 1 -2.8523 -2.2539 12.5750 45 1 -3.8972 -3.9943 13.9165 46 1 -3.1939 -5.3856 8.6052 47 1 0.6550 -4.3273 2.0456 48 1 2.3415 -4.9353 2.3412 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17792076_6894386.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:12:16 Heat of formation + Delta-G solvation = -139.242063 kcal Electronic energy + Delta-G solvation = -31186.860987 eV Core-core repulsion = 26722.434859 eV Total energy + Delta-G solvation = -4464.426128 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.137 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -42.27249 -41.26296 -40.38995 -38.83139 -37.96998 -37.15467 -36.06192 -35.46916 -34.98713 -32.08779 -29.72147 -28.39178 -28.37525 -27.17083 -27.03684 -26.61016 -24.99309 -22.65920 -22.09762 -21.11467 -20.73366 -20.44883 -19.31434 -18.48524 -18.16260 -17.89737 -17.54154 -17.38809 -17.10367 -16.78418 -16.57142 -16.36442 -15.99136 -15.78350 -15.52748 -15.25521 -15.16460 -14.71934 -14.68546 -14.44905 -14.32290 -14.14240 -13.75536 -13.72854 -13.66174 -13.51905 -13.30245 -13.16842 -12.95873 -12.90425 -12.84704 -12.73224 -12.53871 -12.38196 -12.30845 -12.08326 -11.99348 -11.73560 -11.37143 -11.22876 -11.01512 -10.80058 -10.65241 -10.33503 -10.09922 -9.58116 -5.26584 -0.45460 0.25677 0.60718 0.83419 1.12060 1.19048 1.50290 1.63243 1.81545 1.90472 2.26983 2.65233 2.99899 3.22577 3.28714 3.32569 3.36392 3.50389 3.69309 3.73484 3.76322 3.80918 3.87246 3.92169 4.06900 4.19065 4.25098 4.34295 4.44512 4.46509 4.51216 4.56453 4.61539 4.62267 4.69518 4.71984 4.74133 4.80398 4.84300 4.87950 4.96602 4.98696 5.04830 5.09895 5.18354 5.25743 5.28177 5.56887 6.19870 6.28904 6.41922 6.84184 7.07186 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.183 4.183 2 C 0.116 3.884 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.349 6.349 6 C 0.473 3.527 7 O -0.499 6.499 8 C -0.104 4.104 9 H 0.131 0.869 10 C -0.145 4.145 11 C 0.097 3.903 12 O -0.530 6.530 13 C 0.105 3.895 14 N -0.729 5.729 15 C 0.580 3.420 16 O -0.526 6.526 17 C -0.156 4.156 18 C -0.207 4.207 19 S 0.200 5.800 20 C -0.243 4.243 21 C -0.026 4.026 22 O -0.533 6.533 23 Si 0.656 3.344 24 C -0.053 4.053 25 C -0.099 4.099 26 H 0.061 0.939 27 H 0.073 0.927 28 H 0.083 0.917 29 H 0.067 0.933 30 H 0.080 0.920 31 H 0.067 0.933 32 H 0.083 0.917 33 H 0.073 0.927 34 H 0.062 0.938 35 H 0.090 0.910 36 H 0.098 0.902 37 H 0.377 0.623 38 H 0.086 0.914 39 H 0.085 0.915 40 H 0.395 0.605 41 H 0.171 0.829 42 H 0.125 0.875 43 H 0.381 0.619 44 H -0.237 1.237 45 H -0.232 1.232 46 H 0.157 0.843 47 H 0.115 0.885 48 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.034 3.961 3.991 7.547 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.080 3.920 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.266 6.266 6 C 0.316 3.684 7 O -0.387 6.387 8 C -0.123 4.123 9 H 0.148 0.852 10 C -0.183 4.183 11 C 0.055 3.945 12 O -0.335 6.335 13 C -0.019 4.019 14 N -0.382 5.382 15 C 0.366 3.634 16 O -0.402 6.402 17 C -0.174 4.174 18 C -0.345 4.345 19 S 0.466 5.534 20 C -0.360 4.360 21 C -0.140 4.140 22 O -0.339 6.339 23 Si 0.555 3.445 24 C -0.082 4.082 25 C -0.137 4.137 26 H 0.080 0.920 27 H 0.092 0.908 28 H 0.102 0.898 29 H 0.086 0.914 30 H 0.098 0.902 31 H 0.086 0.914 32 H 0.102 0.898 33 H 0.092 0.908 34 H 0.081 0.919 35 H 0.108 0.892 36 H 0.116 0.884 37 H 0.225 0.775 38 H 0.104 0.896 39 H 0.103 0.897 40 H 0.230 0.770 41 H 0.188 0.812 42 H 0.142 0.858 43 H 0.229 0.771 44 H -0.161 1.161 45 H -0.155 1.155 46 H 0.174 0.826 47 H 0.133 0.867 48 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges 4.182 4.634 4.353 7.610 hybrid contribution -0.610 -0.199 -1.332 1.479 sum 3.572 4.434 3.021 6.446 Atomic orbital electron populations 1.22495 0.93882 1.04711 1.02964 1.22244 0.94473 0.92388 0.82907 1.21866 1.02332 0.92431 1.03253 1.22497 1.01774 1.03113 0.96705 1.86560 1.69580 1.25234 1.45217 1.23381 0.77312 0.80719 0.86984 1.90598 1.35183 1.70008 1.42914 1.22426 1.02974 0.95456 0.91403 0.85164 1.23701 1.01088 0.97166 0.96343 1.22443 0.85100 0.93819 0.93128 1.86604 1.35939 1.89047 1.21919 1.21963 0.97201 1.01770 0.80973 1.45708 1.25546 1.55410 1.11579 1.17585 0.81124 0.79343 0.85335 1.90852 1.41446 1.37577 1.70328 1.20205 0.97568 1.04769 0.94869 1.25773 1.04132 1.03823 1.00788 1.83068 1.15288 1.48412 1.06585 1.24808 1.02598 1.08483 1.00088 1.24456 0.98805 0.88640 1.02053 1.86552 1.38356 1.20584 1.88361 0.95150 0.90408 0.80376 0.78572 1.21058 0.97711 0.98428 0.91019 1.23035 1.04017 0.94853 0.91771 0.91995 0.90818 0.89848 0.91366 0.90157 0.91421 0.89815 0.90833 0.91906 0.89188 0.88371 0.77452 0.89627 0.89712 0.76990 0.81201 0.85823 0.77144 1.16134 1.15508 0.82593 0.86706 0.88747 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.15 8.37 37.16 0.31 0.16 16 2 C 0.12 0.10 1.13 -90.62 -0.10 0.00 16 3 C -0.14 0.12 8.85 37.16 0.33 0.45 16 4 C -0.18 -0.17 8.37 37.16 0.31 0.14 16 5 O -0.35 -0.60 9.89 -39.25 -0.39 -0.99 16 6 C 0.47 0.73 6.79 36.00 0.24 0.97 16 7 O -0.50 -1.78 11.41 -18.75 -0.21 -2.00 16 8 C -0.10 0.10 4.19 -90.96 -0.38 -0.28 16 9 H 0.13 -0.21 8.14 -51.93 -0.42 -0.63 16 10 C -0.15 0.37 7.04 -25.77 -0.18 0.19 16 11 C 0.10 -0.22 1.42 -89.67 -0.13 -0.35 16 12 O -0.53 1.18 13.42 -35.23 -0.47 0.70 16 13 C 0.10 -0.12 5.26 -4.04 -0.02 -0.14 16 14 N -0.73 1.33 5.29 -61.45 -0.32 1.01 16 15 C 0.58 1.01 7.79 -12.63 -0.10 0.91 16 16 O -0.53 -3.20 16.80 5.24 0.09 -3.12 16 17 C -0.16 -0.03 5.98 -104.63 -0.63 -0.66 16 18 C -0.21 0.55 10.38 29.93 0.31 0.86 16 19 S 0.20 -0.54 20.20 -107.50 -2.17 -2.71 16 20 C -0.24 0.18 5.65 -36.18 -0.20 -0.03 16 21 C -0.03 0.03 2.94 36.00 0.11 0.13 16 22 O -0.53 0.15 12.88 -35.23 -0.45 -0.30 16 23 Si 0.66 -1.32 30.92 -169.99 -5.26 -6.58 16 24 C -0.05 -0.06 9.95 -39.02 -0.39 -0.44 16 25 C -0.10 0.11 6.79 -25.92 -0.18 -0.07 16 26 H 0.06 0.03 8.14 -51.93 -0.42 -0.39 16 27 H 0.07 -0.02 8.14 -51.93 -0.42 -0.45 16 28 H 0.08 0.21 5.89 -51.93 -0.31 -0.09 16 29 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 30 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 31 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 32 H 0.08 0.23 5.89 -51.93 -0.31 -0.08 16 33 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 34 H 0.06 0.04 8.14 -51.93 -0.42 -0.38 16 35 H 0.09 -0.33 8.14 -51.93 -0.42 -0.76 16 36 H 0.10 -0.20 7.99 -51.93 -0.42 -0.62 16 37 H 0.38 -2.11 7.60 45.56 0.35 -1.76 16 38 H 0.09 -0.03 8.05 -51.93 -0.42 -0.45 16 39 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 40 H 0.40 -2.00 5.82 -40.82 -0.24 -2.24 16 41 H 0.17 -1.03 7.01 -52.49 -0.37 -1.39 16 42 H 0.12 -0.08 7.96 -51.93 -0.41 -0.49 16 43 H 0.38 -1.62 8.70 45.56 0.40 -1.22 16 44 H -0.24 0.03 7.11 56.52 0.40 0.43 16 45 H -0.23 -0.21 7.11 56.52 0.40 0.19 16 46 H 0.16 0.34 8.06 -52.48 -0.42 -0.08 16 47 H 0.11 -0.06 7.41 -51.93 -0.39 -0.45 16 48 H 0.09 -0.09 8.14 -51.93 -0.42 -0.51 16 LS Contribution 405.87 15.07 6.12 6.12 Total: 0.00 -9.66 405.87 -10.15 -19.80 By element: Atomic # 1 Polarization: -7.41 SS G_CDS: -6.38 Total: -13.79 kcal Atomic # 6 Polarization: 2.54 SS G_CDS: -0.69 Total: 1.85 kcal Atomic # 7 Polarization: 1.33 SS G_CDS: -0.32 Total: 1.01 kcal Atomic # 8 Polarization: -4.25 SS G_CDS: -1.44 Total: -5.70 kcal Atomic # 14 Polarization: -1.32 SS G_CDS: -5.26 Total: -6.58 kcal Atomic # 16 Polarization: -0.54 SS G_CDS: -2.17 Total: -2.71 kcal Total LS contribution 6.12 Total: 6.12 kcal Total: -9.66 -10.15 -19.80 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17792076_6894386.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -119.438 kcal (2) G-P(sol) polarization free energy of solvation -9.657 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -129.095 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.147 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.804 kcal (6) G-S(sol) free energy of system = (1) + (5) -139.242 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds