Wall clock time and date at job start Sun Mar 7 2021 12:21:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42906 * 1 3 3 C 1.35654 * 117.00011 * 2 1 4 4 C 1.38402 * 120.12060 * 359.97438 * 3 2 1 5 5 C 1.38729 * 120.02777 * 180.02562 * 4 3 2 6 6 O 1.35719 * 119.85902 * 180.02562 * 5 4 3 7 7 C 1.42899 * 117.00245 * 359.97438 * 6 5 4 8 8 C 1.39145 * 120.27821 * 0.04448 * 5 4 3 9 9 C 1.50704 * 119.88110 * 179.97438 * 8 5 4 10 10 O 1.42901 * 109.46969 * 74.99642 * 9 8 5 11 11 Si 1.86292 * 109.46874 * 195.00028 * 9 8 5 12 12 C 1.37579 * 120.23725 * 359.67196 * 8 5 4 13 13 C 1.39819 * 119.96455 * 0.58591 * 12 8 5 14 14 C 1.47301 * 120.13595 * 179.71681 * 13 12 8 15 15 O 1.21623 * 120.00000 * 179.72180 * 14 13 12 16 16 N 1.34773 * 120.00070 * 359.97438 * 14 13 12 17 17 C 1.46500 * 120.00431 * 179.72645 * 16 14 13 18 18 C 1.52999 * 109.47528 * 180.02562 * 17 16 14 19 19 H 1.08999 * 112.84627 * 316.19742 * 18 17 16 20 20 C 1.53791 * 113.61328 * 87.50026 * 18 17 16 21 21 C 1.53789 * 87.07724 * 89.11748 * 20 18 17 22 22 H 1.08992 * 113.68989 * 270.87001 * 21 20 18 23 23 S 1.81397 * 113.61106 * 139.97985 * 21 20 18 24 24 C 1.81401 * 101.92108 * 82.50310 * 23 21 20 25 25 O 1.42101 * 108.57641 * 196.98807 * 23 21 20 26 26 O 1.42100 * 108.58002 * 328.01816 * 23 21 20 27 27 C 1.53777 * 87.08314 * 25.43123 * 21 20 18 28 28 H 1.08992 * 109.46818 * 180.02562 * 1 2 3 29 29 H 1.08992 * 109.46993 * 300.00244 * 1 2 3 30 30 H 1.08997 * 109.46567 * 60.00145 * 1 2 3 31 31 H 1.07993 * 119.98243 * 0.02562 * 4 3 2 32 32 H 1.09004 * 109.46957 * 60.00180 * 7 6 5 33 33 H 1.08992 * 109.47314 * 180.02562 * 7 6 5 34 34 H 1.09000 * 109.47083 * 300.00233 * 7 6 5 35 35 H 1.09003 * 109.46866 * 314.99956 * 9 8 5 36 36 H 0.96705 * 113.99777 * 60.00741 * 10 9 8 37 37 H 1.48498 * 110.00252 * 58.68346 * 11 9 8 38 38 H 1.48509 * 109.99713 * 179.97438 * 11 9 8 39 39 H 1.08004 * 120.02119 * 180.29457 * 12 8 5 40 40 H 0.97000 * 120.00112 * 359.73083 * 16 14 13 41 41 H 1.09009 * 109.46712 * 300.00517 * 17 16 14 42 42 H 1.08993 * 109.47029 * 59.99907 * 17 16 14 43 43 H 1.09000 * 113.61075 * 203.66498 * 20 18 17 44 44 H 1.08998 * 113.61227 * 334.57349 * 20 18 17 45 45 H 1.08997 * 109.47167 * 60.00005 * 24 23 21 46 46 H 1.09003 * 109.47075 * 179.97438 * 24 23 21 47 47 H 1.09002 * 109.47283 * 299.99455 * 24 23 21 48 48 H 1.08996 * 113.61889 * 220.01587 * 27 21 20 49 49 H 1.08999 * 113.61523 * 89.11283 * 27 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 6 1.2936 2.3710 -0.0005 5 6 1.9254 3.6061 -0.0011 6 8 1.1853 4.7437 -0.0011 7 6 -0.2358 4.5932 -0.0011 8 6 3.3147 3.6834 -0.0020 9 6 3.9917 5.0298 -0.0032 10 8 3.8949 5.6127 1.2980 11 14 5.7861 4.8221 -0.4588 12 6 4.0725 2.5351 0.0044 13 6 3.4462 1.2851 -0.0005 14 6 4.2539 0.0532 0.0000 15 8 3.7065 -1.0329 0.0009 16 7 5.5995 0.1297 0.0047 17 6 6.4028 -1.0954 0.0113 18 6 7.8888 -0.7309 0.0163 19 1 8.1299 0.0721 -0.6802 20 6 8.4667 -0.5206 1.4259 21 6 8.7813 -2.0260 1.4359 22 1 7.9676 -2.6408 1.8204 23 16 10.3833 -2.4285 2.1857 24 6 9.9777 -2.4380 3.9537 25 8 10.7464 -3.7463 1.7974 26 8 11.2830 -1.3580 1.9333 27 6 8.8219 -1.9478 -0.0993 28 1 -0.3633 -1.0276 0.0005 29 1 -0.3633 0.5138 0.8899 30 1 -0.3632 0.5138 -0.8900 31 1 0.2150 2.3164 -0.0005 32 1 -0.5430 4.0439 0.8890 33 1 -0.7053 5.5768 -0.0015 34 1 -0.5430 4.0439 -0.8910 35 1 3.5052 5.6804 -0.7299 36 1 4.3077 5.0864 1.9964 37 1 5.9003 4.1876 -1.7965 38 1 6.4649 6.1429 -0.4641 39 1 5.1506 2.5992 0.0085 40 1 6.0360 0.9959 0.0038 41 1 6.1690 -1.6784 0.9022 42 1 6.1756 -1.6836 -0.8777 43 1 9.3548 0.1111 1.4438 44 1 7.7210 -0.2255 2.1640 45 1 9.2137 -3.1909 4.1472 46 1 10.8725 -2.6723 4.5305 47 1 9.6033 -1.4569 4.2459 48 1 8.3630 -2.8046 -0.5925 49 1 9.8070 -1.7061 -0.4983 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17836384_12297780.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 12:21:30 Heat of formation + Delta-G solvation = -139.629486 kcal Electronic energy + Delta-G solvation = -34330.696788 eV Core-core repulsion = 29547.571669 eV Total energy + Delta-G solvation = -4783.125120 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.137 amu Computer time = 2.40 seconds Orbital eigenvalues (eV) -42.10732 -40.94059 -40.21448 -39.56831 -38.47279 -37.95487 -37.00433 -36.98084 -35.38776 -32.27026 -32.01438 -30.68708 -29.36475 -29.11394 -28.13791 -27.06606 -26.16691 -25.56129 -24.25659 -22.70650 -21.55940 -20.64402 -20.05599 -19.73083 -18.75999 -18.55168 -18.11710 -17.93416 -17.28566 -17.21709 -17.00555 -16.92132 -16.66652 -16.38789 -16.32776 -16.11869 -15.94845 -15.80888 -15.65402 -15.38349 -14.86848 -14.60186 -14.37948 -14.23572 -14.23270 -14.12500 -13.95914 -13.83530 -13.61010 -13.40770 -13.28311 -13.12942 -12.99071 -12.82024 -12.78310 -12.64927 -12.59843 -12.26947 -12.05201 -12.01163 -11.84070 -11.78486 -11.69171 -11.14053 -10.74808 -10.43670 -10.09470 -9.94999 -9.17833 -5.18048 -1.03265 -0.25407 0.07090 1.21255 1.54888 1.67415 1.81555 1.92439 2.00854 2.06309 2.10611 2.49546 2.65752 2.74606 3.08745 3.24923 3.31958 3.35930 3.42859 3.44681 3.58965 3.68089 3.77489 3.78579 3.87863 3.94524 4.01418 4.02625 4.04464 4.09162 4.09914 4.18886 4.22446 4.36618 4.39330 4.40949 4.46130 4.49614 4.61751 4.62120 4.65384 4.70854 4.72943 4.79786 4.90388 4.98323 5.04469 5.24789 5.40874 5.96202 6.24034 6.49840 6.59357 7.31297 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.274 6.274 3 C 0.234 3.766 4 C -0.314 4.314 5 C 0.223 3.777 6 O -0.296 6.296 7 C 0.021 3.979 8 C -0.198 4.198 9 C -0.050 4.050 10 O -0.535 6.535 11 Si 0.672 3.328 12 C -0.004 4.004 13 C -0.210 4.210 14 C 0.566 3.434 15 O -0.518 6.518 16 N -0.733 5.733 17 C 0.138 3.862 18 C -0.116 4.116 19 H 0.098 0.902 20 C -0.112 4.112 21 C -0.609 4.609 22 H 0.154 0.846 23 S 2.422 3.578 24 C -0.655 4.655 25 O -0.939 6.939 26 O -0.936 6.936 27 C -0.096 4.096 28 H 0.107 0.893 29 H 0.058 0.942 30 H 0.057 0.943 31 H 0.145 0.855 32 H 0.060 0.940 33 H 0.107 0.893 34 H 0.058 0.942 35 H 0.115 0.885 36 H 0.375 0.625 37 H -0.251 1.251 38 H -0.250 1.250 39 H 0.140 0.860 40 H 0.398 0.602 41 H 0.074 0.926 42 H 0.076 0.924 43 H 0.111 0.889 44 H 0.090 0.910 45 H 0.128 0.872 46 H 0.129 0.871 47 H 0.129 0.871 48 H 0.093 0.907 49 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.648 2.210 2.589 4.990 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.184 6.184 3 C 0.185 3.815 4 C -0.334 4.334 5 C 0.175 3.825 6 O -0.207 6.207 7 C -0.073 4.073 8 C -0.200 4.200 9 C -0.161 4.161 10 O -0.340 6.340 11 Si 0.573 3.427 12 C -0.023 4.023 13 C -0.214 4.214 14 C 0.354 3.646 15 O -0.394 6.394 16 N -0.387 5.387 17 C 0.014 3.986 18 C -0.136 4.136 19 H 0.116 0.884 20 C -0.151 4.151 21 C -0.718 4.718 22 H 0.172 0.828 23 S 2.605 3.395 24 C -0.804 4.804 25 O -0.936 6.936 26 O -0.933 6.933 27 C -0.135 4.135 28 H 0.126 0.874 29 H 0.076 0.924 30 H 0.076 0.924 31 H 0.162 0.838 32 H 0.079 0.921 33 H 0.125 0.875 34 H 0.077 0.923 35 H 0.132 0.868 36 H 0.222 0.778 37 H -0.176 1.176 38 H -0.174 1.174 39 H 0.157 0.843 40 H 0.233 0.767 41 H 0.092 0.908 42 H 0.094 0.906 43 H 0.129 0.871 44 H 0.109 0.891 45 H 0.147 0.853 46 H 0.147 0.853 47 H 0.148 0.852 48 H 0.112 0.888 49 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges -2.779 1.892 1.289 3.600 hybrid contribution -1.832 0.561 0.327 1.944 sum -4.611 2.453 1.616 5.467 Atomic orbital electron populations 1.23245 0.78176 1.04882 1.01357 1.86398 1.21219 1.25029 1.85764 1.18718 0.90639 0.84406 0.87753 1.21312 1.01168 0.91512 1.19396 1.18726 0.90465 0.84702 0.88604 1.86164 1.19487 1.28501 1.86532 1.23219 0.77792 1.04686 1.01644 1.19457 0.90854 0.96426 1.13229 1.24835 1.09721 0.92220 0.89276 1.86560 1.82043 1.49292 1.16092 0.95490 0.77159 0.84733 0.85319 1.20682 0.98455 0.89986 0.93134 1.19022 0.90641 0.93526 1.18185 1.17774 0.81630 0.88594 0.76607 1.90862 1.71391 1.28690 1.48419 1.45834 1.05963 1.09712 1.77150 1.21143 0.87530 0.86737 1.03159 1.22483 0.93806 0.99292 0.97973 0.88421 1.22868 1.03136 0.90638 0.98411 1.31772 1.23157 1.07560 1.09302 0.82829 1.07828 0.77786 0.75373 0.78545 1.30239 1.12738 1.11604 1.25868 1.93614 1.81205 1.37783 1.80989 1.93608 1.59272 1.56571 1.83857 1.22581 1.01401 0.99597 0.89956 0.87439 0.92354 0.92399 0.83765 0.92140 0.87483 0.92293 0.86811 0.77791 1.17590 1.17416 0.84317 0.76697 0.90817 0.90607 0.87101 0.89115 0.85341 0.85268 0.85213 0.88798 0.88155 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 25. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.27 -0.79 8.56 -40.58 -0.35 -1.14 16 3 C 0.23 0.45 6.70 -38.73 -0.26 0.20 16 4 C -0.31 -0.10 8.01 -39.34 -0.31 -0.41 16 5 C 0.22 0.19 6.67 -39.06 -0.26 -0.07 16 6 O -0.30 -0.29 9.80 -18.86 -0.18 -0.48 16 7 C 0.02 -0.05 9.80 101.05 0.99 0.94 16 8 C -0.20 0.02 5.27 -104.52 -0.55 -0.53 16 9 C -0.05 0.02 2.37 36.01 0.09 0.11 16 10 O -0.54 -0.05 12.88 -35.23 -0.45 -0.50 16 11 Si 0.67 -1.44 29.91 -169.99 -5.08 -6.52 16 12 C 0.00 0.01 8.14 -39.23 -0.32 -0.31 16 13 C -0.21 -0.25 5.89 -104.83 -0.62 -0.87 16 14 C 0.57 1.20 7.76 -12.58 -0.10 1.11 16 15 O -0.52 -3.17 15.15 -16.67 -0.25 -3.43 16 16 N -0.73 1.19 5.50 -61.42 -0.34 0.85 16 17 C 0.14 -0.29 5.35 -4.04 -0.02 -0.31 16 18 C -0.12 0.46 3.94 -89.80 -0.35 0.11 16 19 H 0.10 -0.49 8.14 -51.93 -0.42 -0.91 16 20 C -0.11 0.54 7.16 -25.91 -0.19 0.35 16 21 C -0.61 2.41 3.82 -25.92 -0.10 2.31 16 22 H 0.15 -0.89 7.72 -51.93 -0.40 -1.29 16 23 S 2.42 -3.90 5.34 -107.50 -0.57 -4.47 16 24 C -0.66 2.79 10.62 101.05 1.07 3.87 16 25 O -0.94 -2.75 18.10 -57.83 -1.05 -3.80 16 26 O -0.94 -1.63 17.19 -57.83 -0.99 -2.62 16 27 C -0.10 0.31 7.26 -25.92 -0.19 0.12 16 28 H 0.11 -0.25 8.14 -51.93 -0.42 -0.67 16 29 H 0.06 -0.16 7.66 -51.93 -0.40 -0.55 16 30 H 0.06 -0.15 7.66 -51.93 -0.40 -0.55 16 31 H 0.14 -0.26 4.50 -52.49 -0.24 -0.50 16 32 H 0.06 -0.20 7.65 -51.93 -0.40 -0.60 16 33 H 0.11 -0.39 8.14 -51.93 -0.42 -0.82 16 34 H 0.06 -0.20 7.65 -51.93 -0.40 -0.60 16 35 H 0.11 0.10 7.82 -51.93 -0.41 -0.31 16 36 H 0.38 -1.55 8.70 45.56 0.40 -1.15 16 37 H -0.25 0.00 7.11 56.52 0.40 0.41 16 38 H -0.25 -0.33 7.11 56.52 0.40 0.07 16 39 H 0.14 -0.65 3.44 -52.48 -0.18 -0.83 16 40 H 0.40 -1.83 6.49 -40.82 -0.26 -2.09 16 41 H 0.07 -0.13 7.39 -51.92 -0.38 -0.51 16 42 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 43 H 0.11 -0.54 7.36 -51.93 -0.38 -0.92 16 44 H 0.09 -0.55 8.10 -51.93 -0.42 -0.97 16 45 H 0.13 -0.73 8.14 -51.93 -0.42 -1.15 16 46 H 0.13 -0.52 8.14 -51.92 -0.42 -0.95 16 47 H 0.13 -0.79 8.14 -51.92 -0.42 -1.21 16 48 H 0.09 -0.32 8.10 -51.93 -0.42 -0.74 16 49 H 0.10 -0.32 8.10 -51.93 -0.42 -0.74 16 LS Contribution 410.51 15.07 6.19 6.19 Total: 0.00 -16.32 410.51 -10.08 -26.41 By element: Atomic # 1 Polarization: -11.20 SS G_CDS: -6.87 Total: -18.06 kcal Atomic # 6 Polarization: 7.70 SS G_CDS: -0.13 Total: 7.57 kcal Atomic # 7 Polarization: 1.19 SS G_CDS: -0.34 Total: 0.85 kcal Atomic # 8 Polarization: -8.68 SS G_CDS: -3.28 Total: -11.96 kcal Atomic # 14 Polarization: -1.44 SS G_CDS: -5.08 Total: -6.52 kcal Atomic # 16 Polarization: -3.90 SS G_CDS: -0.57 Total: -4.47 kcal Total LS contribution 6.19 Total: 6.19 kcal Total: -16.32 -10.08 -26.41 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17836384_12297780.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -113.224 kcal (2) G-P(sol) polarization free energy of solvation -16.324 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -129.548 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.082 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.405 kcal (6) G-S(sol) free energy of system = (1) + (5) -139.629 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.40 seconds