Wall clock time and date at job start Sun Mar 7 2021 12:22:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81402 * 1 3 3 O 1.42096 * 108.57966 * 2 1 4 4 O 1.42103 * 108.58024 * 228.97182 * 2 1 3 5 5 C 1.81401 * 101.92259 * 114.48446 * 2 1 3 6 6 H 1.09005 * 112.85235 * 53.80099 * 5 2 1 7 7 C 1.53782 * 113.61690 * 185.00102 * 5 2 1 8 8 C 1.53781 * 87.08137 * 139.98003 * 7 5 2 9 9 H 1.08998 * 113.61220 * 219.93578 * 8 7 5 10 10 C 1.52997 * 113.61399 * 89.11534 * 8 7 5 11 11 N 1.46506 * 109.47289 * 174.99933 * 10 8 7 12 12 C 1.34774 * 120.00072 * 180.02562 * 11 10 8 13 13 O 1.21563 * 120.00203 * 0.02562 * 12 11 10 14 14 C 1.47696 * 119.99732 * 180.02562 * 12 11 10 15 15 C 1.39806 * 120.15223 * 179.72396 * 14 12 11 16 16 F 1.35098 * 120.08616 * 359.97438 * 15 14 12 17 17 C 1.38313 * 119.82850 * 179.78787 * 15 14 12 18 18 C 1.38190 * 120.14642 * 0.47068 * 17 15 14 19 19 C 1.50695 * 119.84064 * 179.76591 * 18 17 15 20 20 O 1.42904 * 109.46965 * 255.01424 * 19 18 17 21 21 Si 1.86301 * 109.47641 * 15.01432 * 19 18 17 22 22 C 1.38655 * 120.31226 * 359.78009 * 18 17 15 23 23 F 1.35099 * 119.91409 * 179.97438 * 22 18 17 24 24 C 1.38065 * 120.16880 * 359.97438 * 22 18 17 25 25 C 1.53784 * 113.61447 * 282.50213 * 5 2 1 26 26 H 1.08999 * 109.47087 * 305.51320 * 1 2 3 27 27 H 1.08994 * 109.46786 * 65.51827 * 1 2 3 28 28 H 1.09003 * 109.46864 * 185.51734 * 1 2 3 29 29 H 1.08999 * 113.61026 * 25.43282 * 7 5 2 30 30 H 1.09003 * 113.61174 * 254.52645 * 7 5 2 31 31 H 1.09001 * 109.47289 * 54.99804 * 10 8 7 32 32 H 1.09004 * 109.47261 * 295.00060 * 10 8 7 33 33 H 0.97001 * 119.99251 * 0.02562 * 11 10 8 34 34 H 1.08004 * 119.92850 * 180.22762 * 17 15 14 35 35 H 1.09002 * 109.47102 * 135.02241 * 19 18 17 36 36 H 0.96705 * 113.99757 * 60.00361 * 20 19 18 37 37 H 1.48508 * 109.99467 * 58.68304 * 21 19 18 38 38 H 1.48499 * 110.00053 * 180.02562 * 21 19 18 39 39 H 1.08002 * 120.07639 * 179.97438 * 24 22 18 40 40 H 1.08997 * 113.61599 * 105.46727 * 25 5 2 41 41 H 1.09008 * 113.61136 * 334.56272 * 25 5 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 8 2.2668 1.3469 0.0000 4 8 2.2668 -0.8842 -1.0161 5 6 2.1888 -0.7356 1.6153 6 1 1.6958 -1.6958 1.7678 7 6 3.6894 -0.7535 1.9509 8 6 3.2921 -0.3791 3.3885 9 1 3.9586 0.3496 3.8499 10 6 3.0231 -1.5895 4.2849 11 7 2.7710 -1.1361 5.6550 12 6 2.5089 -2.0346 6.6247 13 8 2.4822 -3.2214 6.3626 14 6 2.2542 -1.5774 8.0058 15 6 1.9763 -2.5063 9.0131 16 9 1.9393 -3.8259 8.7259 17 6 1.7431 -2.0711 10.3050 18 6 1.7747 -0.7212 10.5990 19 6 1.5144 -0.2543 12.0079 20 8 0.2044 0.3110 12.0880 21 14 1.6387 -1.7013 13.1748 22 6 2.0446 0.2056 9.6036 23 9 2.0730 1.5234 9.8999 24 6 2.2843 -0.2149 8.3106 25 6 2.0176 0.2404 2.7913 26 1 -0.3633 0.5970 0.8365 27 1 -0.3633 0.4259 -0.9352 28 1 -0.3633 -1.0229 0.0988 29 1 4.2603 0.0217 1.4397 30 1 4.1440 -1.7406 1.8665 31 1 3.8907 -2.2493 4.2744 32 1 2.1516 -2.1293 3.9146 33 1 2.7927 -0.1891 5.8642 34 1 1.5318 -2.7876 11.0851 35 1 2.2526 0.4990 12.2833 36 1 -0.5044 -0.3045 11.8559 37 1 2.9864 -2.3176 13.0777 38 1 1.3834 -1.2540 14.5676 39 1 2.4939 0.5084 7.5364 40 1 1.1226 0.0557 3.3853 41 1 2.1315 1.2874 2.5099 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17836384_12360598.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 12:22:46 Heat of formation + Delta-G solvation = -158.217466 kcal Electronic energy + Delta-G solvation = -29885.575515 eV Core-core repulsion = 25111.176030 eV Total energy + Delta-G solvation = -4774.399484 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.088 amu Computer time = 1.61 seconds Orbital eigenvalues (eV) -50.16559 -50.06268 -41.55441 -40.60979 -39.74251 -38.01801 -37.76509 -37.06722 -35.76595 -33.52712 -31.48668 -30.76913 -29.73976 -27.74793 -27.16495 -25.53960 -24.53052 -23.64826 -21.97285 -20.90341 -19.95452 -19.52672 -18.85574 -18.77390 -18.49634 -17.97769 -17.43490 -17.28291 -17.11544 -16.96346 -16.83297 -16.63282 -16.26422 -16.22679 -16.00158 -15.97792 -15.60560 -15.29689 -15.00054 -14.68341 -14.44384 -14.29410 -14.26532 -14.13861 -13.94233 -13.86155 -13.50482 -13.26077 -13.24335 -13.11165 -13.04363 -12.90826 -12.45853 -12.21545 -12.11946 -11.96752 -11.90179 -11.33225 -11.10898 -10.75593 -10.71696 -10.35337 -9.90152 -5.24006 -1.10043 -0.91532 -0.43794 0.99076 1.32561 1.46834 1.60044 1.70649 1.79721 2.17160 2.41228 2.66494 2.68233 2.72925 2.96406 2.99174 3.09281 3.14049 3.19969 3.27300 3.35201 3.42719 3.61896 3.72090 3.77727 3.92601 3.97093 4.08497 4.18033 4.20956 4.26021 4.27807 4.37282 4.48994 4.52259 4.53935 4.57842 4.58588 4.61365 4.66085 4.89989 5.10618 5.26747 6.12816 6.30496 6.88913 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.655 4.655 2 S 2.423 3.577 3 O -0.936 6.936 4 O -0.938 6.938 5 C -0.610 4.610 6 H 0.154 0.846 7 C -0.096 4.096 8 C -0.116 4.116 9 H 0.098 0.902 10 C 0.135 3.865 11 N -0.723 5.723 12 C 0.560 3.440 13 O -0.512 6.512 14 C -0.142 4.142 15 C 0.160 3.840 16 F -0.103 7.103 17 C -0.130 4.130 18 C -0.100 4.100 19 C -0.072 4.072 20 O -0.529 6.529 21 Si 0.689 3.311 22 C 0.111 3.889 23 F -0.120 7.120 24 C -0.094 4.094 25 C -0.113 4.113 26 H 0.129 0.871 27 H 0.130 0.870 28 H 0.128 0.872 29 H 0.102 0.898 30 H 0.094 0.906 31 H 0.080 0.920 32 H 0.077 0.923 33 H 0.402 0.598 34 H 0.159 0.841 35 H 0.122 0.878 36 H 0.381 0.619 37 H -0.250 1.250 38 H -0.246 1.246 39 H 0.152 0.848 40 H 0.089 0.911 41 H 0.109 0.891 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.174 0.619 2.615 4.159 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.804 4.804 2 S 2.605 3.395 3 O -0.933 6.933 4 O -0.935 6.935 5 C -0.718 4.718 6 H 0.172 0.828 7 C -0.135 4.135 8 C -0.135 4.135 9 H 0.116 0.884 10 C 0.012 3.988 11 N -0.376 5.376 12 C 0.346 3.654 13 O -0.388 6.388 14 C -0.146 4.146 15 C 0.139 3.861 16 F -0.081 7.081 17 C -0.149 4.149 18 C -0.102 4.102 19 C -0.183 4.183 20 O -0.335 6.335 21 Si 0.589 3.411 22 C 0.091 3.909 23 F -0.099 7.099 24 C -0.114 4.114 25 C -0.151 4.151 26 H 0.147 0.853 27 H 0.148 0.852 28 H 0.147 0.853 29 H 0.121 0.879 30 H 0.113 0.887 31 H 0.098 0.902 32 H 0.095 0.905 33 H 0.238 0.762 34 H 0.176 0.824 35 H 0.140 0.860 36 H 0.229 0.771 37 H -0.175 1.175 38 H -0.170 1.170 39 H 0.169 0.831 40 H 0.108 0.892 41 H 0.128 0.872 Dipole moment (debyes) X Y Z Total from point charges -1.865 0.220 2.596 3.204 hybrid contribution -0.378 0.688 0.252 0.825 sum -2.243 0.908 2.848 3.737 Atomic orbital electron populations 1.30230 1.26599 1.11673 1.11902 1.07814 0.78499 0.75867 0.77278 1.93610 1.79214 1.34161 1.86295 1.93618 1.79082 1.66985 1.53797 1.31784 1.07719 1.12254 1.20084 0.82774 1.22596 0.90708 1.04647 0.95577 1.22463 0.98195 0.97656 0.95219 0.88407 1.21239 1.02567 0.95495 0.79484 1.45825 1.72645 1.10200 1.08971 1.17802 0.77544 0.86046 0.84038 1.90905 1.49742 1.15722 1.82403 1.19851 1.07465 0.92902 0.94393 1.17489 0.97865 0.78551 0.92157 1.91662 1.92646 1.29955 1.93869 1.20880 1.03133 0.95260 0.95579 1.20529 0.99834 0.92417 0.97380 1.25153 0.88628 1.08573 0.95911 1.86600 1.13754 1.41854 1.91246 0.94839 0.86732 0.80389 0.79158 1.17224 1.02365 0.78544 0.92777 1.91589 1.93639 1.30888 1.93758 1.21180 0.99345 0.94879 0.95948 1.22857 0.99638 0.98347 0.94262 0.85270 0.85175 0.85291 0.87923 0.88713 0.90181 0.90478 0.76233 0.82387 0.86020 0.77112 1.17457 1.16989 0.83079 0.89244 0.87221 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 25. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.65 2.87 10.62 101.05 1.07 3.95 16 2 S 2.42 -4.24 5.30 -107.50 -0.57 -4.81 16 3 O -0.94 -1.59 17.34 -57.83 -1.00 -2.59 16 4 O -0.94 -2.60 18.10 -57.83 -1.05 -3.65 16 5 C -0.61 2.57 3.81 -25.92 -0.10 2.47 16 6 H 0.15 -0.93 7.72 -51.93 -0.40 -1.33 16 7 C -0.10 0.34 7.26 -25.92 -0.19 0.15 16 8 C -0.12 0.52 3.94 -89.81 -0.35 0.16 16 9 H 0.10 -0.52 8.14 -51.93 -0.42 -0.94 16 10 C 0.14 -0.39 5.35 -4.04 -0.02 -0.41 16 11 N -0.72 1.96 5.51 -61.29 -0.34 1.62 16 12 C 0.56 0.35 7.77 -12.40 -0.10 0.25 16 13 O -0.51 -2.41 15.34 5.31 0.08 -2.33 16 14 C -0.14 0.09 5.88 -104.92 -0.62 -0.52 16 15 C 0.16 0.00 7.28 -38.97 -0.28 -0.29 16 16 F -0.10 -0.25 15.55 2.25 0.04 -0.21 16 17 C -0.13 0.29 8.62 -39.57 -0.34 -0.05 16 18 C -0.10 0.18 5.27 -104.49 -0.55 -0.37 16 19 C -0.07 0.13 2.44 36.00 0.09 0.22 16 20 O -0.53 0.70 12.88 -35.23 -0.45 0.24 16 21 Si 0.69 -1.90 29.90 -169.99 -5.08 -6.98 16 22 C 0.11 -0.13 7.23 -39.49 -0.29 -0.41 16 23 F -0.12 -0.05 16.73 2.25 0.04 -0.02 16 24 C -0.09 0.24 9.51 -39.12 -0.37 -0.13 16 25 C -0.11 0.56 7.16 -25.92 -0.19 0.37 16 26 H 0.13 -0.79 8.14 -51.92 -0.42 -1.21 16 27 H 0.13 -0.55 8.14 -51.93 -0.42 -0.97 16 28 H 0.13 -0.75 8.14 -51.92 -0.42 -1.17 16 29 H 0.10 -0.35 8.10 -51.93 -0.42 -0.78 16 30 H 0.09 -0.37 8.10 -51.93 -0.42 -0.79 16 31 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 32 H 0.08 -0.19 7.39 -51.93 -0.38 -0.58 16 33 H 0.40 -2.18 6.50 -40.82 -0.27 -2.45 16 34 H 0.16 -0.73 5.10 -52.48 -0.27 -1.00 16 35 H 0.12 -0.14 7.89 -51.93 -0.41 -0.55 16 36 H 0.38 -2.13 8.70 45.56 0.40 -1.73 16 37 H -0.25 0.08 7.11 56.52 0.40 0.48 16 38 H -0.25 -0.14 7.11 56.52 0.40 0.27 16 39 H 0.15 -0.82 6.41 -52.49 -0.34 -1.15 16 40 H 0.09 -0.54 8.10 -51.93 -0.42 -0.96 16 41 H 0.11 -0.54 7.48 -51.92 -0.39 -0.93 16 LS Contribution 365.21 15.07 5.50 5.50 Total: 0.00 -14.52 365.21 -9.70 -24.22 By element: Atomic # 1 Polarization: -11.75 SS G_CDS: -4.63 Total: -16.38 kcal Atomic # 6 Polarization: 7.62 SS G_CDS: -2.23 Total: 5.38 kcal Atomic # 7 Polarization: 1.96 SS G_CDS: -0.34 Total: 1.62 kcal Atomic # 8 Polarization: -5.90 SS G_CDS: -2.42 Total: -8.32 kcal Atomic # 9 Polarization: -0.30 SS G_CDS: 0.07 Total: -0.23 kcal Atomic # 14 Polarization: -1.90 SS G_CDS: -5.08 Total: -6.98 kcal Atomic # 16 Polarization: -4.24 SS G_CDS: -0.57 Total: -4.81 kcal Total LS contribution 5.50 Total: 5.50 kcal Total: -14.52 -9.70 -24.22 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17836384_12360598.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -134.002 kcal (2) G-P(sol) polarization free energy of solvation -14.518 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -148.520 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.697 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.215 kcal (6) G-S(sol) free energy of system = (1) + (5) -158.217 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.61 seconds